RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
CTNS-205ENST00000467663 ACEP12821 1306 aa17.04■□□□□ 0.32
CTNS-205ENST00000467663 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
CTNS-205ENST00000467663 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
CTNS-205ENST00000467663 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
CTNS-205ENST00000467663 ROCK2O75116 1388 aaKnown RBP17.03■□□□□ 0.32
CTNS-205ENST00000467663 FAM83GA6ND36 823 aa17.03■□□□□ 0.32
CTNS-205ENST00000467663 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
CTNS-205ENST00000467663 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
CTNS-205ENST00000467663 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
CTNS-205ENST00000467663 VPS72Q15906 364 aa17.01■□□□□ 0.31
CTNS-205ENST00000467663 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
CTNS-205ENST00000467663 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
CTNS-205ENST00000467663 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
CTNS-205ENST00000467663 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
CTNS-205ENST00000467663 GLI3P10071 1580 aa16.99■□□□□ 0.31
CTNS-205ENST00000467663 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
CTNS-205ENST00000467663 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
CTNS-205ENST00000467663 PLCH1Q4KWH8 1693 aa16.98■□□□□ 0.31
CTNS-205ENST00000467663 CRYBG1Q9Y4K1 1723 aa16.98■□□□□ 0.31
CTNS-205ENST00000467663 ONECUT3O60422 494 aaPredicted RBP16.97■□□□□ 0.31
CTNS-205ENST00000467663 CABP1Q9NZU7 370 aa16.97■□□□□ 0.31
CTNS-205ENST00000467663 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
CTNS-205ENST00000467663 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
CTNS-205ENST00000467663 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
CTNS-205ENST00000467663 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
CTNS-205ENST00000467663 NUTM2GQ5VZR2 741 aa16.94■□□□□ 0.3
CTNS-205ENST00000467663 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
CTNS-205ENST00000467663 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
CTNS-205ENST00000467663 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
CTNS-205ENST00000467663 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
CTNS-205ENST00000467663 USP19O94966 1318 aa16.93■□□□□ 0.3
CTNS-205ENST00000467663 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
CTNS-205ENST00000467663 KIAA0232Q92628 1395 aa16.92■□□□□ 0.3
CTNS-205ENST00000467663 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
CTNS-205ENST00000467663 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
CTNS-205ENST00000467663 USP6P35125 1406 aa16.92■□□□□ 0.3
CTNS-205ENST00000467663 PHRF1Q9P1Y6 1649 aaKnown RBP16.92■□□□□ 0.3
CTNS-205ENST00000467663 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
CTNS-205ENST00000467663 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
CTNS-205ENST00000467663 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
CTNS-205ENST00000467663 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
CTNS-205ENST00000467663 CHRNA2Q15822 529 aa16.89■□□□□ 0.29
CTNS-205ENST00000467663 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
CTNS-205ENST00000467663 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
CTNS-205ENST00000467663 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
CTNS-205ENST00000467663 CPDO75976 1380 aa16.89■□□□□ 0.29
CTNS-205ENST00000467663 GCP02774 474 aa16.88■□□□□ 0.29
CTNS-205ENST00000467663 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
CTNS-205ENST00000467663 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
CTNS-205ENST00000467663 NLRP6P59044 892 aa16.86■□□□□ 0.29
CTNS-205ENST00000467663 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
CTNS-205ENST00000467663 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
CTNS-205ENST00000467663 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
CTNS-205ENST00000467663 BRWD3Q6RI45 1802 aa16.84■□□□□ 0.29
CTNS-205ENST00000467663 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
CTNS-205ENST00000467663 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
CTNS-205ENST00000467663 SLIT3O75094 1523 aa16.83■□□□□ 0.28
CTNS-205ENST00000467663 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
CTNS-205ENST00000467663 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.284e-10■■■■■ 50.6
CTNS-205ENST00000467663 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.28
CTNS-205ENST00000467663 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
CTNS-205ENST00000467663 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.28
CTNS-205ENST00000467663 A0A0G2JS52 829 aa16.82■□□□□ 0.28
CTNS-205ENST00000467663 MYT1Q01538 1121 aa16.82■□□□□ 0.28
CTNS-205ENST00000467663 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
CTNS-205ENST00000467663 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
CTNS-205ENST00000467663 EVA1CP58658 441 aa16.81■□□□□ 0.28
CTNS-205ENST00000467663 TESK2Q96S53 571 aa16.81■□□□□ 0.28
CTNS-205ENST00000467663 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
CTNS-205ENST00000467663 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
CTNS-205ENST00000467663 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
CTNS-205ENST00000467663 SLC24A1O60721 1099 aa16.8■□□□□ 0.28
CTNS-205ENST00000467663 THSD7AQ9UPZ6 1657 aa16.8■□□□□ 0.28
CTNS-205ENST00000467663 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
CTNS-205ENST00000467663 EP400Q96L91 3159 aa16.79■□□□□ 0.28
CTNS-205ENST00000467663 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
CTNS-205ENST00000467663 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
CTNS-205ENST00000467663 BARGINQ6ZT62 677 aa16.79■□□□□ 0.28
CTNS-205ENST00000467663 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
CTNS-205ENST00000467663 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
CTNS-205ENST00000467663 TMC1Q8TDI8 760 aa16.77■□□□□ 0.28
CTNS-205ENST00000467663 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
CTNS-205ENST00000467663 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
CTNS-205ENST00000467663 SF3B2Q13435 895 aaKnown RBP16.76■□□□□ 0.27
CTNS-205ENST00000467663 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
CTNS-205ENST00000467663 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
CTNS-205ENST00000467663 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
CTNS-205ENST00000467663 USP35Q9P2H5 1018 aa16.76■□□□□ 0.27
CTNS-205ENST00000467663 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
CTNS-205ENST00000467663 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
CTNS-205ENST00000467663 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
CTNS-205ENST00000467663 CRB1P82279 1406 aa16.74■□□□□ 0.27
CTNS-205ENST00000467663 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
CTNS-205ENST00000467663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
CTNS-205ENST00000467663 AXIN2Q9Y2T1 843 aa16.74■□□□□ 0.27
CTNS-205ENST00000467663 USP47Q96K76 1375 aa16.74■□□□□ 0.27
CTNS-205ENST00000467663 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
CTNS-205ENST00000467663 EDC4Q6P2E9 1401 aaKnown RBP16.73■□□□□ 0.27
CTNS-205ENST00000467663 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms