RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 GJD4Q96KN9 370 aaPredicted RBP25.82■■□□□ 1.72
CGREF1-208ENST00000467539 CABP1Q9NZU7 370 aa25.82■■□□□ 1.72
CGREF1-208ENST00000467539 PPIP5K1Q6PFW1 1433 aa25.8■■□□□ 1.72
CGREF1-208ENST00000467539 ALS2Q96Q42 1657 aa25.79■■□□□ 1.72
CGREF1-208ENST00000467539 QRICH2Q9H0J4 1663 aa25.79■■□□□ 1.72
CGREF1-208ENST00000467539 PCGF6Q9BYE7 350 aa25.78■■□□□ 1.72
CGREF1-208ENST00000467539 UPF1Q92900 1129 aaKnown RBP eCLIP25.77■■□□□ 1.72
CGREF1-208ENST00000467539 RGS12O14924 1447 aa25.77■■□□□ 1.72
CGREF1-208ENST00000467539 TOPAZ1Q8N9V7 1692 aa25.77■■□□□ 1.72
CGREF1-208ENST00000467539 ABTB2Q8N961 1025 aa25.76■■□□□ 1.71
CGREF1-208ENST00000467539 BRD4O60885 1362 aaPredicted RBP25.76■■□□□ 1.71
CGREF1-208ENST00000467539 RALGAPBQ86X10 1494 aa25.75■■□□□ 1.71
CGREF1-208ENST00000467539 VPS72Q15906 364 aa25.75■■□□□ 1.71
CGREF1-208ENST00000467539 NUTM2GQ5VZR2 741 aa25.74■■□□□ 1.71
CGREF1-208ENST00000467539 ZNF692Q9BU19 519 aaPredicted RBP25.74■■□□□ 1.71
CGREF1-208ENST00000467539 SBNO2Q9Y2G9 1366 aa25.73■■□□□ 1.71
CGREF1-208ENST00000467539 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
CGREF1-208ENST00000467539 TIMELESSQ9UNS1 1208 aa25.73■■□□□ 1.71
CGREF1-208ENST00000467539 NLRP13Q86W25 1043 aa25.71■■□□□ 1.71
CGREF1-208ENST00000467539 BTG4Q9NY30 223 aa25.71■■□□□ 1.71
CGREF1-208ENST00000467539 ABCA3Q99758 1704 aa25.69■■□□□ 1.7
CGREF1-208ENST00000467539 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.69■■□□□ 1.7
CGREF1-208ENST00000467539 ONECUT3O60422 494 aaPredicted RBP25.69■■□□□ 1.7
CGREF1-208ENST00000467539 PRDM11Q9NQV5 511 aa25.69■■□□□ 1.7
CGREF1-208ENST00000467539 ATAD2Q6PL18 1390 aa25.68■■□□□ 1.7
CGREF1-208ENST00000467539 ZC3H6P61129 1189 aaKnown RBP25.67■■□□□ 1.7
CGREF1-208ENST00000467539 PUS7Q96PZ0 661 aaKnown RBP25.67■■□□□ 1.7
CGREF1-208ENST00000467539 USP6P35125 1406 aa25.66■■□□□ 1.7
CGREF1-208ENST00000467539 SLC24A1O60721 1099 aa25.66■■□□□ 1.7
CGREF1-208ENST00000467539 CCDC9Q9Y3X0 531 aaKnown RBP25.66■■□□□ 1.7
CGREF1-208ENST00000467539 NWD2Q9ULI1 1742 aa25.66■■□□□ 1.7
CGREF1-208ENST00000467539 GCP02774 474 aa25.65■■□□□ 1.7
CGREF1-208ENST00000467539 KIAA0232Q92628 1395 aa25.65■■□□□ 1.7
CGREF1-208ENST00000467539 USP19O94966 1318 aa25.64■■□□□ 1.7
CGREF1-208ENST00000467539 SSH2Q76I76 1423 aa25.64■■□□□ 1.7
CGREF1-208ENST00000467539 ST20-MTHFSA0A0A6YYL1 179 aa25.64■■□□□ 1.7
CGREF1-208ENST00000467539 NLRP6P59044 892 aa25.64■■□□□ 1.7
CGREF1-208ENST00000467539 CRYBG1Q9Y4K1 1723 aa25.63■■□□□ 1.69
CGREF1-208ENST00000467539 COL14A1Q05707 1796 aaKnown RBP25.62■■□□□ 1.69
CGREF1-208ENST00000467539 CHRNA2Q15822 529 aa25.62■■□□□ 1.69
CGREF1-208ENST00000467539 TESK2Q96S53 571 aa25.62■■□□□ 1.69
CGREF1-208ENST00000467539 PLCH1Q4KWH8 1693 aa25.61■■□□□ 1.69
CGREF1-208ENST00000467539 GLI3P10071 1580 aa25.61■■□□□ 1.69
CGREF1-208ENST00000467539 SEPT12Q8IYM1 358 aa25.61■■□□□ 1.69
CGREF1-208ENST00000467539 CPSF1Q10570 1443 aaKnown RBP25.61■■□□□ 1.69
CGREF1-208ENST00000467539 TTC21BQ7Z4L5 1316 aa25.61■■□□□ 1.69
CGREF1-208ENST00000467539 CPDO75976 1380 aa25.59■■□□□ 1.69
CGREF1-208ENST00000467539 SPATA31A5Q5VU36 1347 aa25.58■■□□□ 1.69
CGREF1-208ENST00000467539 SPATA31A7Q8IWB4 1347 aa25.58■■□□□ 1.69
CGREF1-208ENST00000467539 TTC21AQ8NDW8 1320 aa25.58■■□□□ 1.69
CGREF1-208ENST00000467539 TMC1Q8TDI8 760 aa25.57■■□□□ 1.68
CGREF1-208ENST00000467539 SLC12A5Q9H2X9 1139 aa25.57■■□□□ 1.68
CGREF1-208ENST00000467539 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
CGREF1-208ENST00000467539 EVA1CP58658 441 aa25.55■■□□□ 1.68
CGREF1-208ENST00000467539 CCDC125Q86Z20 511 aa25.55■■□□□ 1.68
CGREF1-208ENST00000467539 PHRF1Q9P1Y6 1649 aaKnown RBP25.55■■□□□ 1.68
CGREF1-208ENST00000467539 FAM98CQ17RN3 349 aaKnown RBP25.54■■□□□ 1.68
CGREF1-208ENST00000467539 HDGFL2Q7Z4V5 671 aaPredicted RBP25.53■■□□□ 1.68
CGREF1-208ENST00000467539 CCER1Q8TC90 406 aaPredicted RBP25.53■■□□□ 1.68
CGREF1-208ENST00000467539 STRN4Q9NRL3 753 aa25.53■■□□□ 1.68
CGREF1-208ENST00000467539 NRAPQ86VF7 1730 aa25.53■■□□□ 1.68
CGREF1-208ENST00000467539 TERF2IPQ9NYB0 399 aa25.52■■□□□ 1.68
CGREF1-208ENST00000467539 KRT27Q7Z3Y8 459 aa25.51■■□□□ 1.67
CGREF1-208ENST00000467539 KCNH5Q8NCM2 988 aa25.51■■□□□ 1.67
CGREF1-208ENST00000467539 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
CGREF1-208ENST00000467539 NRKQ7Z2Y5 1582 aa25.49■■□□□ 1.67
CGREF1-208ENST00000467539 USP47Q96K76 1375 aa25.49■■□□□ 1.67
CGREF1-208ENST00000467539 AKAP12Q02952 1782 aa25.49■■□□□ 1.67
CGREF1-208ENST00000467539 CD163L1Q9NR16 1453 aa25.48■■□□□ 1.67
CGREF1-208ENST00000467539 TMF1P82094 1093 aa25.48■■□□□ 1.67
CGREF1-208ENST00000467539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.48■■□□□ 1.67
CGREF1-208ENST00000467539 CAMTA1Q9Y6Y1 1673 aa25.48■■□□□ 1.67
CGREF1-208ENST00000467539 SLIT3O75094 1523 aa25.47■■□□□ 1.67
CGREF1-208ENST00000467539 AATKQ6ZMQ8 1374 aa25.47■■□□□ 1.67
CGREF1-208ENST00000467539 A0A0G2JS52 829 aa25.47■■□□□ 1.67
CGREF1-208ENST00000467539 MYT1Q01538 1121 aa25.47■■□□□ 1.67
CGREF1-208ENST00000467539 LARP1Q6PKG0 1096 aaKnown RBP25.47■■□□□ 1.67
CGREF1-208ENST00000467539 ARHGEF25Q86VW2 580 aa25.47■■□□□ 1.67
CGREF1-208ENST00000467539 USP31Q70CQ4 1352 aa25.45■■□□□ 1.67
CGREF1-208ENST00000467539 PIK3C2AO00443 1686 aa25.45■■□□□ 1.66
CGREF1-208ENST00000467539 NINLQ9Y2I6 1382 aa25.44■■□□□ 1.66
CGREF1-208ENST00000467539 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
CGREF1-208ENST00000467539 BARGINQ6ZT62 677 aa25.44■■□□□ 1.66
CGREF1-208ENST00000467539 ZRANB1Q9UGI0 708 aa25.44■■□□□ 1.66
CGREF1-208ENST00000467539 BRWD3Q6RI45 1802 aa25.42■■□□□ 1.66
CGREF1-208ENST00000467539 CDCA8Q53HL2 280 aa25.42■■□□□ 1.66
CGREF1-208ENST00000467539 NME9Q86XW9 330 aa25.42■■□□□ 1.66
CGREF1-208ENST00000467539 USP35Q9P2H5 1018 aa25.42■■□□□ 1.66
CGREF1-208ENST00000467539 AXIN2Q9Y2T1 843 aa25.42■■□□□ 1.66
CGREF1-208ENST00000467539 THRAP3Q9Y2W1 955 aaKnown RBP25.42■■□□□ 1.66
CGREF1-208ENST00000467539 A0A1W2PP64 1363 aa25.42■■□□□ 1.66
CGREF1-208ENST00000467539 EP400Q96L91 3159 aa25.41■■□□□ 1.66
CGREF1-208ENST00000467539 EDC4Q6P2E9 1401 aaKnown RBP25.41■■□□□ 1.66
CGREF1-208ENST00000467539 TCP11L2Q8N4U5 519 aa25.41■■□□□ 1.66
CGREF1-208ENST00000467539 LMO7Q8WWI1 1683 aa25.41■■□□□ 1.66
CGREF1-208ENST00000467539 SOX12O15370 315 aa25.39■■□□□ 1.66
CGREF1-208ENST00000467539 MON2Q7Z3U7 1717 aa25.39■■□□□ 1.65
CGREF1-208ENST00000467539 COL5A2P05997 1499 aaPredicted RBP25.38■■□□□ 1.65
CGREF1-208ENST00000467539 BLMP54132 1417 aaPredicted RBP25.37■■□□□ 1.65
CGREF1-208ENST00000467539 SF3B2Q13435 895 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms