RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
HDLBP-231ENST00000467435 USP54Q70EL1 1684 aa16.4■□□□□ 0.22
HDLBP-231ENST00000467435 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
HDLBP-231ENST00000467435 NME9Q86XW9 330 aa16.39■□□□□ 0.21
HDLBP-231ENST00000467435 SSH2Q76I76 1423 aa16.37■□□□□ 0.21
HDLBP-231ENST00000467435 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
HDLBP-231ENST00000467435 HSPA2P54652 639 aa16.37■□□□□ 0.21
HDLBP-231ENST00000467435 TTC21BQ7Z4L5 1316 aa16.37■□□□□ 0.21
HDLBP-231ENST00000467435 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
HDLBP-231ENST00000467435 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
HDLBP-231ENST00000467435 KIF1AQ12756 1690 aa16.36■□□□□ 0.21
HDLBP-231ENST00000467435 CDK12Q9NYV4 1490 aaPredicted RBP16.35■□□□□ 0.21
HDLBP-231ENST00000467435 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
HDLBP-231ENST00000467435 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
HDLBP-231ENST00000467435 COG3Q96JB2 828 aa16.35■□□□□ 0.21
HDLBP-231ENST00000467435 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
HDLBP-231ENST00000467435 C14orf37Q86TY3 774 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
HDLBP-231ENST00000467435 ZRANB1Q9UGI0 708 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 TTC21AQ8NDW8 1320 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 LRRC7Q96NW7 1537 aa16.34■□□□□ 0.21
HDLBP-231ENST00000467435 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.21
HDLBP-231ENST00000467435 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-231ENST00000467435 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-231ENST00000467435 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
HDLBP-231ENST00000467435 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
HDLBP-231ENST00000467435 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
HDLBP-231ENST00000467435 NEFLP07196 543 aa16.3■□□□□ 0.2
HDLBP-231ENST00000467435 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
HDLBP-231ENST00000467435 PHF8Q9UPP1 1060 aa16.29■□□□□ 0.2
HDLBP-231ENST00000467435 DCCP43146 1447 aa16.28■□□□□ 0.2
HDLBP-231ENST00000467435 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
HDLBP-231ENST00000467435 TRPM3Q9HCF6 1732 aaPredicted RBP16.28■□□□□ 0.2
HDLBP-231ENST00000467435 USP31Q70CQ4 1352 aa16.28■□□□□ 0.2
HDLBP-231ENST00000467435 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
HDLBP-231ENST00000467435 APAF1O14727 1248 aa16.27■□□□□ 0.2
HDLBP-231ENST00000467435 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
HDLBP-231ENST00000467435 U2AF1L5P0DN76 240 aaPredicted RBP16.27■□□□□ 0.2
HDLBP-231ENST00000467435 U2AF1Q01081 240 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDLBP-231ENST00000467435 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
HDLBP-231ENST00000467435 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.2
HDLBP-231ENST00000467435 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
HDLBP-231ENST00000467435 LTN1O94822 1766 aa16.26■□□□□ 0.19
HDLBP-231ENST00000467435 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
HDLBP-231ENST00000467435 FBLN1P23142 703 aa16.26■□□□□ 0.19
HDLBP-231ENST00000467435 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
HDLBP-231ENST00000467435 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
HDLBP-231ENST00000467435 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
HDLBP-231ENST00000467435 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
HDLBP-231ENST00000467435 FKBP8Q14318 412 aa16.24■□□□□ 0.19
HDLBP-231ENST00000467435 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
HDLBP-231ENST00000467435 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
HDLBP-231ENST00000467435 MST1RQ04912 1400 aa16.24■□□□□ 0.19
HDLBP-231ENST00000467435 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
HDLBP-231ENST00000467435 CDCA7LQ96GN5 454 aa16.23■□□□□ 0.19
HDLBP-231ENST00000467435 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
HDLBP-231ENST00000467435 ALS2Q96Q42 1657 aa16.21■□□□□ 0.18
HDLBP-231ENST00000467435 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-231ENST00000467435 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
HDLBP-231ENST00000467435 TCP11L2Q8N4U5 519 aa16.2■□□□□ 0.18
HDLBP-231ENST00000467435 MSH6P52701 1360 aa16.2■□□□□ 0.18
HDLBP-231ENST00000467435 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
HDLBP-231ENST00000467435 ATF3P18847 181 aa16.19■□□□□ 0.18
HDLBP-231ENST00000467435 NLRP6P59044 892 aa16.19■□□□□ 0.18
HDLBP-231ENST00000467435 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
HDLBP-231ENST00000467435 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
HDLBP-231ENST00000467435 NFAT5O94916 1531 aa16.19■□□□□ 0.18
HDLBP-231ENST00000467435 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 FLT4P35916 1363 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 DLG5Q8TDM6 1919 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 SOX12O15370 315 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 IL13P35225 146 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 PSME1Q06323 249 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
HDLBP-231ENST00000467435 PNNQ9H307 717 aaKnown RBP16.18■□□□□ 0.18
HDLBP-231ENST00000467435 RRP7AQ9Y3A4 280 aaKnown RBP16.17■□□□□ 0.18
HDLBP-231ENST00000467435 SLIT3O75094 1523 aa16.17■□□□□ 0.18
HDLBP-231ENST00000467435 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
HDLBP-231ENST00000467435 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
HDLBP-231ENST00000467435 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
HDLBP-231ENST00000467435 NUTM2GQ5VZR2 741 aa16.16■□□□□ 0.18
HDLBP-231ENST00000467435 RSPH6AQ9H0K4 717 aa16.16■□□□□ 0.18
HDLBP-231ENST00000467435 FCHSD2O94868 740 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
HDLBP-231ENST00000467435 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 CCDC27Q2M243 656 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
HDLBP-231ENST00000467435 KIF24Q5T7B8 1368 aa16.14■□□□□ 0.17
HDLBP-231ENST00000467435 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
HDLBP-231ENST00000467435 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
HDLBP-231ENST00000467435 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-231ENST00000467435 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms