RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PSME1Q06323 249 aa15.53■□□□□ 0.08
MSH5-212ENST00000467319 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
MSH5-212ENST00000467319 USP54Q70EL1 1684 aa15.53■□□□□ 0.08
MSH5-212ENST00000467319 TMF1P82094 1093 aa15.52■□□□□ 0.08
MSH5-212ENST00000467319 A0A1W2PP64 1363 aa15.5■□□□□ 0.07
MSH5-212ENST00000467319 SLIT3O75094 1523 aa15.48■□□□□ 0.07
MSH5-212ENST00000467319 EDC4Q6P2E9 1401 aaKnown RBP15.48■□□□□ 0.07
MSH5-212ENST00000467319 ANKRD36BQ8N2N9 1353 aa15.48■□□□□ 0.07
MSH5-212ENST00000467319 USP19O94966 1318 aa15.47■□□□□ 0.07
MSH5-212ENST00000467319 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
MSH5-212ENST00000467319 KTN1Q86UP2 1357 aaKnown RBP15.47■□□□□ 0.07
MSH5-212ENST00000467319 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
MSH5-212ENST00000467319 PLCH1Q4KWH8 1693 aa15.45■□□□□ 0.06
MSH5-212ENST00000467319 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
MSH5-212ENST00000467319 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.45■□□□□ 0.06
MSH5-212ENST00000467319 TTC21BQ7Z4L5 1316 aa15.44■□□□□ 0.06
MSH5-212ENST00000467319 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
MSH5-212ENST00000467319 NUTM2BA6NNL0 878 aaPredicted RBP15.43■□□□□ 0.06
MSH5-212ENST00000467319 NUTM2EB1AL46 878 aaPredicted RBP15.43■□□□□ 0.06
MSH5-212ENST00000467319 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
MSH5-212ENST00000467319 NUTM2AQ8IVF1 878 aaPredicted RBP15.43■□□□□ 0.06
MSH5-212ENST00000467319 TMC1Q8TDI8 760 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 SLIT2O94813 1529 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 NFAT5O94916 1531 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 OVOS2A0A0J9YW53 1432 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 OVOS2Q6IE36 1432 aa15.43■□□□□ 0.06
MSH5-212ENST00000467319 COL14A1Q05707 1796 aaKnown RBP15.42■□□□□ 0.06
MSH5-212ENST00000467319 RGS17Q9UGC6 210 aaPredicted RBP15.42■□□□□ 0.06
MSH5-212ENST00000467319 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
MSH5-212ENST00000467319 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
MSH5-212ENST00000467319 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
MSH5-212ENST00000467319 C11orf95C9JLR9 678 aaPredicted RBP15.41■□□□□ 0.06
MSH5-212ENST00000467319 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
MSH5-212ENST00000467319 HDGFL2Q7Z4V5 671 aaPredicted RBP15.41■□□□□ 0.06
MSH5-212ENST00000467319 CABLES1Q8TDN4 633 aa15.41■□□□□ 0.06
MSH5-212ENST00000467319 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
MSH5-212ENST00000467319 ADAMTS2O95450 1211 aa15.4■□□□□ 0.06
MSH5-212ENST00000467319 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
MSH5-212ENST00000467319 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
MSH5-212ENST00000467319 CPDO75976 1380 aa15.39■□□□□ 0.05
MSH5-212ENST00000467319 KIF7Q2M1P5 1343 aa15.39■□□□□ 0.05
MSH5-212ENST00000467319 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
MSH5-212ENST00000467319 FNBP4Q8N3X1 1017 aaPredicted RBP15.38■□□□□ 0.05
MSH5-212ENST00000467319 PHF23Q9BUL5 403 aaPredicted RBP15.38■□□□□ 0.05
MSH5-212ENST00000467319 AFF2P51816 1311 aa15.38■□□□□ 0.05
MSH5-212ENST00000467319 ABCC6O95255 1503 aa15.38■□□□□ 0.05
MSH5-212ENST00000467319 NSD3Q9BZ95 1437 aa15.37■□□□□ 0.05
MSH5-212ENST00000467319 NUTM2GQ5VZR2 741 aa15.37■□□□□ 0.05
MSH5-212ENST00000467319 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
MSH5-212ENST00000467319 C8orf37Q96NL8 207 aa15.37■□□□□ 0.05
MSH5-212ENST00000467319 CCDC7Q96M83 1385 aa15.36■□□□□ 0.05
MSH5-212ENST00000467319 NME9Q86XW9 330 aa15.36■□□□□ 0.05
MSH5-212ENST00000467319 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
MSH5-212ENST00000467319 ATRNO75882 1429 aa15.35■□□□□ 0.05
MSH5-212ENST00000467319 ANKRD26Q9UPS8 1709 aa15.35■□□□□ 0.05
MSH5-212ENST00000467319 COL18A1P39060 1754 aa15.35■□□□□ 0.05
MSH5-212ENST00000467319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.35■□□□□ 0.05
MSH5-212ENST00000467319 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
MSH5-212ENST00000467319 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
MSH5-212ENST00000467319 NLRP6P59044 892 aa15.34■□□□□ 0.05
MSH5-212ENST00000467319 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
MSH5-212ENST00000467319 GCP02774 474 aa15.33■□□□□ 0.04
MSH5-212ENST00000467319 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
MSH5-212ENST00000467319 ZNF772Q68DY9 489 aaPredicted RBP15.33■□□□□ 0.04
MSH5-212ENST00000467319 POTEAQ6S8J7 498 aa15.33■□□□□ 0.04
MSH5-212ENST00000467319 NGLY1Q96IV0 654 aa15.33■□□□□ 0.04
MSH5-212ENST00000467319 ZRANB1Q9UGI0 708 aa15.33■□□□□ 0.04
MSH5-212ENST00000467319 LTN1O94822 1766 aa15.32■□□□□ 0.04
MSH5-212ENST00000467319 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
MSH5-212ENST00000467319 CDK12Q9NYV4 1490 aaPredicted RBP15.32■□□□□ 0.04
MSH5-212ENST00000467319 GLI3P10071 1580 aa15.32■□□□□ 0.04
MSH5-212ENST00000467319 CAMTA1Q9Y6Y1 1673 aa15.32■□□□□ 0.04
MSH5-212ENST00000467319 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
MSH5-212ENST00000467319 PRDM11Q9NQV5 511 aa15.31■□□□□ 0.04
MSH5-212ENST00000467319 COL5A2P05997 1499 aaPredicted RBP15.3■□□□□ 0.04
MSH5-212ENST00000467319 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
MSH5-212ENST00000467319 USP21Q9UK80 565 aa15.3■□□□□ 0.04
MSH5-212ENST00000467319 FYB1O15117 783 aa15.29■□□□□ 0.04
MSH5-212ENST00000467319 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
MSH5-212ENST00000467319 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
MSH5-212ENST00000467319 ZC3H6P61129 1189 aaKnown RBP15.28■□□□□ 0.04
MSH5-212ENST00000467319 ARHGEF25Q86VW2 580 aa15.28■□□□□ 0.04
MSH5-212ENST00000467319 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
MSH5-212ENST00000467319 NSD2O96028 1365 aa15.27■□□□□ 0.04
MSH5-212ENST00000467319 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.04
MSH5-212ENST00000467319 PANK3Q9H999 370 aa15.27■□□□□ 0.04
MSH5-212ENST00000467319 RGS12O14924 1447 aa15.26■□□□□ 0.03
MSH5-212ENST00000467319 CHRNA2Q15822 529 aa15.26■□□□□ 0.03
MSH5-212ENST00000467319 ILDR2Q71H61 639 aa15.26■□□□□ 0.03
MSH5-212ENST00000467319 BTG4Q9NY30 223 aa15.26■□□□□ 0.03
MSH5-212ENST00000467319 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
MSH5-212ENST00000467319 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
MSH5-212ENST00000467319 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
MSH5-212ENST00000467319 VPS72Q15906 364 aa15.25■□□□□ 0.03
MSH5-212ENST00000467319 COG3Q96JB2 828 aa15.25■□□□□ 0.03
MSH5-212ENST00000467319 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
MSH5-212ENST00000467319 RGPD5Q99666 1765 aa15.25■□□□□ 0.03
MSH5-212ENST00000467319 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms