RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ATP13A2Q9NQ11 1180 aa8.66□□□□□ -1.02
CCDC58-203ENST00000466854 F12P00748 615 aaPredicted RBP8.65□□□□□ -1.02
CCDC58-203ENST00000466854 ZNF511Q8NB15 262 aa8.65□□□□□ -1.02
CCDC58-203ENST00000466854 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-203ENST00000466854 PER1O15534 1290 aaPredicted RBP8.64□□□□□ -1.03
CCDC58-203ENST00000466854 TUSC1Q2TAM9 212 aa8.64□□□□□ -1.03
CCDC58-203ENST00000466854 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
CCDC58-203ENST00000466854 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
CCDC58-203ENST00000466854 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
CCDC58-203ENST00000466854 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
CCDC58-203ENST00000466854 LILRB3O75022 631 aa8.62□□□□□ -1.03
CCDC58-203ENST00000466854 CTHP32929 405 aa8.62□□□□□ -1.03
CCDC58-203ENST00000466854 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
CCDC58-203ENST00000466854 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
CCDC58-203ENST00000466854 TRIM47Q96LD4 638 aa8.6□□□□□ -1.03
CCDC58-203ENST00000466854 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
CCDC58-203ENST00000466854 VARSP26640 1264 aaKnown RBP8.59□□□□□ -1.03
CCDC58-203ENST00000466854 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
CCDC58-203ENST00000466854 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
CCDC58-203ENST00000466854 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-203ENST00000466854 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-203ENST00000466854 INSM1Q01101 510 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-203ENST00000466854 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-203ENST00000466854 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
CCDC58-203ENST00000466854 MPNDQ8N594 471 aa8.58□□□□□ -1.04
CCDC58-203ENST00000466854 TSC1Q92574 1164 aa8.58□□□□□ -1.04
CCDC58-203ENST00000466854 BMP1P13497 986 aa8.57□□□□□ -1.04
CCDC58-203ENST00000466854 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
CCDC58-203ENST00000466854 TRIM46Q7Z4K8 759 aa8.57□□□□□ -1.04
CCDC58-203ENST00000466854 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
CCDC58-203ENST00000466854 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
CCDC58-203ENST00000466854 SENP2Q9HC62 589 aa8.56□□□□□ -1.04
CCDC58-203ENST00000466854 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
CCDC58-203ENST00000466854 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
CCDC58-203ENST00000466854 NNTQ13423 1086 aa8.55□□□□□ -1.04
CCDC58-203ENST00000466854 FBXO31Q5XUX0 539 aaPredicted RBP8.55□□□□□ -1.04
CCDC58-203ENST00000466854 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
CCDC58-203ENST00000466854 FAM174AQ8TBP5 190 aa8.54□□□□□ -1.04
CCDC58-203ENST00000466854 BCANQ96GW7 911 aa8.54□□□□□ -1.04
CCDC58-203ENST00000466854 KDM4CQ9H3R0 1056 aa8.54□□□□□ -1.04
CCDC58-203ENST00000466854 PLEKHG3A1L390 1219 aa8.53□□□□□ -1.04
CCDC58-203ENST00000466854 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
CCDC58-203ENST00000466854 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
CCDC58-203ENST00000466854 KIFC2Q96AC6 838 aa8.53□□□□□ -1.04
CCDC58-203ENST00000466854 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
CCDC58-203ENST00000466854 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
CCDC58-203ENST00000466854 WFS1O76024 890 aa8.52□□□□□ -1.05
CCDC58-203ENST00000466854 ADH1CP00326 375 aa8.52□□□□□ -1.05
CCDC58-203ENST00000466854 KLF16Q9BXK1 252 aaPredicted RBP8.52□□□□□ -1.05
CCDC58-203ENST00000466854 TIMP2P16035 220 aa8.51□□□□□ -1.05
CCDC58-203ENST00000466854 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
CCDC58-203ENST00000466854 CTDSPL2Q05D32 466 aa8.5□□□□□ -1.05
CCDC58-203ENST00000466854 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
CCDC58-203ENST00000466854 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
CCDC58-203ENST00000466854 BPHLQ86WA6 291 aaPredicted RBP8.5□□□□□ -1.05
CCDC58-203ENST00000466854 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC58-203ENST00000466854 C1QTNF2Q9BXJ5 285 aa8.5□□□□□ -1.05
CCDC58-203ENST00000466854 NR3C2P08235 984 aa8.49□□□□□ -1.05
CCDC58-203ENST00000466854 GRM5P41594 1212 aa8.49□□□□□ -1.05
CCDC58-203ENST00000466854 WDR4P57081 412 aaKnown RBP8.49□□□□□ -1.05
CCDC58-203ENST00000466854 ARID5BQ14865 1188 aa8.49□□□□□ -1.05
CCDC58-203ENST00000466854 AGERQ15109 404 aa8.49□□□□□ -1.05
CCDC58-203ENST00000466854 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
CCDC58-203ENST00000466854 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
CCDC58-203ENST00000466854 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
CCDC58-203ENST00000466854 ARMC2Q8NEN0 867 aa8.48□□□□□ -1.05
CCDC58-203ENST00000466854 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
CCDC58-203ENST00000466854 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
CCDC58-203ENST00000466854 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
CCDC58-203ENST00000466854 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
CCDC58-203ENST00000466854 PPP2R2DQ66LE6 453 aa8.46□□□□□ -1.06
CCDC58-203ENST00000466854 MRPL14Q6P1L8 145 aaKnown RBP8.46□□□□□ -1.06
CCDC58-203ENST00000466854 ITPKCQ96DU7 683 aa8.46□□□□□ -1.06
CCDC58-203ENST00000466854 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
CCDC58-203ENST00000466854 NR5A1Q13285 461 aa8.45□□□□□ -1.06
CCDC58-203ENST00000466854 TRMT44Q8IYL2 757 aaKnown RBP8.45□□□□□ -1.06
CCDC58-203ENST00000466854 MAGEB6P1A0A0J9YX57 407 aa8.44□□□□□ -1.06
CCDC58-203ENST00000466854 ZIC2O95409 532 aaPredicted RBP8.44□□□□□ -1.06
CCDC58-203ENST00000466854 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
CCDC58-203ENST00000466854 WIPF1O43516 503 aa8.43□□□□□ -1.06
CCDC58-203ENST00000466854 FSHRP23945 695 aa8.43□□□□□ -1.06
CCDC58-203ENST00000466854 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.06
CCDC58-203ENST00000466854 PURBQ96QR8 312 aaKnown RBP8.43□□□□□ -1.06
CCDC58-203ENST00000466854 CARD14Q9BXL6 1004 aa8.43□□□□□ -1.06
CCDC58-203ENST00000466854 NR6A1Q15406 480 aa8.42□□□□□ -1.06
CCDC58-203ENST00000466854 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
CCDC58-203ENST00000466854 KRTAP4-8Q9BYQ9 185 aa8.42□□□□□ -1.06
CCDC58-203ENST00000466854 NXF1Q9UBU9 619 aaKnown RBP8.42□□□□□ -1.06
CCDC58-203ENST00000466854 FAM181BA6NEQ2 426 aa8.41□□□□□ -1.06
CCDC58-203ENST00000466854 VASH1Q7L8A9 365 aaPredicted RBP8.41□□□□□ -1.06
CCDC58-203ENST00000466854 FKBPLQ9UIM3 349 aa8.41□□□□□ -1.06
CCDC58-203ENST00000466854 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
CCDC58-203ENST00000466854 SCARF1Q14162 830 aa8.4□□□□□ -1.06
CCDC58-203ENST00000466854 PDXDC2PQ6P474 469 aa8.4□□□□□ -1.06
CCDC58-203ENST00000466854 OCSTAMPQ9BR26 566 aa8.4□□□□□ -1.06
CCDC58-203ENST00000466854 AP1G2O75843 785 aa8.39□□□□□ -1.07
CCDC58-203ENST00000466854 VEGFBP49765 207 aa8.39□□□□□ -1.07
CCDC58-203ENST00000466854 MEIOBQ8N635 442 aa8.39□□□□□ -1.07
CCDC58-203ENST00000466854 EPS8L1Q8TE68 723 aa8.39□□□□□ -1.07
CCDC58-203ENST00000466854 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms