RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 AVPP01185 164 aa9.59□□□□□ -0.87
LRCH3-212ENST00000466845 SKOR1P84550 965 aa9.59□□□□□ -0.87
LRCH3-212ENST00000466845 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
LRCH3-212ENST00000466845 PPP2R2DQ66LE6 453 aa9.59□□□□□ -0.87
LRCH3-212ENST00000466845 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
LRCH3-212ENST00000466845 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.59□□□□□ -0.87
LRCH3-212ENST00000466845 PLEKHG3A1L390 1219 aa9.58□□□□□ -0.88
LRCH3-212ENST00000466845 F12P00748 615 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-212ENST00000466845 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-212ENST00000466845 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
LRCH3-212ENST00000466845 CRIPAKQ8N1N5 446 aa9.58□□□□□ -0.88
LRCH3-212ENST00000466845 VARSP26640 1264 aaKnown RBP9.57□□□□□ -0.88
LRCH3-212ENST00000466845 SH3BP2P78314 561 aa9.57□□□□□ -0.88
LRCH3-212ENST00000466845 MPNDQ8N594 471 aa9.57□□□□□ -0.88
LRCH3-212ENST00000466845 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
LRCH3-212ENST00000466845 BAP1Q92560 729 aa9.57□□□□□ -0.88
LRCH3-212ENST00000466845 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
LRCH3-212ENST00000466845 NISCHQ9Y2I1 1504 aa9.56□□□□□ -0.88
LRCH3-212ENST00000466845 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-212ENST00000466845 ZNF511Q8NB15 262 aa9.56□□□□□ -0.88
LRCH3-212ENST00000466845 TSC1Q92574 1164 aa9.56□□□□□ -0.88
LRCH3-212ENST00000466845 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
LRCH3-212ENST00000466845 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
LRCH3-212ENST00000466845 SIAH2O43255 324 aa9.54□□□□□ -0.88
LRCH3-212ENST00000466845 LCE2BO14633 110 aa9.53□□□□□ -0.88
LRCH3-212ENST00000466845 PER1O15534 1290 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-212ENST00000466845 SMPD1P17405 629 aa9.52□□□□□ -0.89
LRCH3-212ENST00000466845 BRPF1P55201 1214 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-212ENST00000466845 NBPF14Q5TI25 921 aa9.52□□□□□ -0.89
LRCH3-212ENST00000466845 BPHLQ86WA6 291 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-212ENST00000466845 PROCA1Q8NCQ7 364 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-212ENST00000466845 AXIN1O15169 862 aa9.51□□□□□ -0.89
LRCH3-212ENST00000466845 PNMA1Q8ND90 353 aa9.51□□□□□ -0.89
LRCH3-212ENST00000466845 FAM174AQ8TBP5 190 aa9.51□□□□□ -0.89
LRCH3-212ENST00000466845 AAASQ9NRG9 546 aa9.51□□□□□ -0.89
LRCH3-212ENST00000466845 MAP10Q9P2G4 905 aa9.51□□□□□ -0.89
LRCH3-212ENST00000466845 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
LRCH3-212ENST00000466845 TMEM259Q4ZIN3 620 aa9.5□□□□□ -0.89
LRCH3-212ENST00000466845 ALDH1A1P00352 501 aa9.49□□□□□ -0.89
LRCH3-212ENST00000466845 LINC01559Q495D7 138 aa9.49□□□□□ -0.89
LRCH3-212ENST00000466845 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
LRCH3-212ENST00000466845 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
LRCH3-212ENST00000466845 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
LRCH3-212ENST00000466845 J3QL48 77 aa9.48□□□□□ -0.89
LRCH3-212ENST00000466845 ZNF787Q6DD87 383 aa9.48□□□□□ -0.89
LRCH3-212ENST00000466845 EIF5BO60841 1220 aaKnown RBP9.47□□□□□ -0.89
LRCH3-212ENST00000466845 AGERQ15109 404 aa9.47□□□□□ -0.89
LRCH3-212ENST00000466845 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
LRCH3-212ENST00000466845 AP1G2O75843 785 aa9.45□□□□□ -0.9
LRCH3-212ENST00000466845 RFC5P40937 340 aa9.45□□□□□ -0.9
LRCH3-212ENST00000466845 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
LRCH3-212ENST00000466845 GPSM3Q9Y4H4 160 aa9.44□□□□□ -0.9
LRCH3-212ENST00000466845 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
LRCH3-212ENST00000466845 HPS1Q92902 700 aa9.43□□□□□ -0.9
LRCH3-212ENST00000466845 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
LRCH3-212ENST00000466845 NR5A1Q13285 461 aa9.42□□□□□ -0.9
LRCH3-212ENST00000466845 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
LRCH3-212ENST00000466845 TRMT44Q8IYL2 757 aaKnown RBP9.42□□□□□ -0.9
LRCH3-212ENST00000466845 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
LRCH3-212ENST00000466845 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
LRCH3-212ENST00000466845 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
LRCH3-212ENST00000466845 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
LRCH3-212ENST00000466845 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
LRCH3-212ENST00000466845 LRRN4Q8WUT4 740 aa9.41□□□□□ -0.9
LRCH3-212ENST00000466845 C1QTNF2Q9BXJ5 285 aa9.41□□□□□ -0.9
LRCH3-212ENST00000466845 MAP4K5Q9Y4K4 846 aa9.41□□□□□ -0.9
LRCH3-212ENST00000466845 SOCS7O14512 581 aa9.4□□□□□ -0.9
LRCH3-212ENST00000466845 ADH1CP00326 375 aa9.4□□□□□ -0.9
LRCH3-212ENST00000466845 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
LRCH3-212ENST00000466845 PTK2Q05397 1052 aa9.4□□□□□ -0.9
LRCH3-212ENST00000466845 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
LRCH3-212ENST00000466845 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
LRCH3-212ENST00000466845 APBB1O00213 710 aa9.38□□□□□ -0.91
LRCH3-212ENST00000466845 NR6A1Q15406 480 aa9.38□□□□□ -0.91
LRCH3-212ENST00000466845 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
LRCH3-212ENST00000466845 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
LRCH3-212ENST00000466845 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
LRCH3-212ENST00000466845 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-212ENST00000466845 NNTQ13423 1086 aa9.37□□□□□ -0.91
LRCH3-212ENST00000466845 ATP13A2Q9NQ11 1180 aa9.37□□□□□ -0.91
LRCH3-212ENST00000466845 ARID5BQ14865 1188 aa9.36□□□□□ -0.91
LRCH3-212ENST00000466845 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
LRCH3-212ENST00000466845 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
LRCH3-212ENST00000466845 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
LRCH3-212ENST00000466845 C11orf95C9JLR9 678 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-212ENST00000466845 GRM5P41594 1212 aa9.34□□□□□ -0.91
LRCH3-212ENST00000466845 VASH1Q7L8A9 365 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-212ENST00000466845 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
LRCH3-212ENST00000466845 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
LRCH3-212ENST00000466845 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
LRCH3-212ENST00000466845 GMPR2Q9P2T1 348 aaKnown RBP9.33□□□□□ -0.92
LRCH3-212ENST00000466845 DACH1Q9UI36 760 aa9.33□□□□□ -0.92
LRCH3-212ENST00000466845 WDR4P57081 412 aaKnown RBP9.32□□□□□ -0.92
LRCH3-212ENST00000466845 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
LRCH3-212ENST00000466845 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
LRCH3-212ENST00000466845 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
LRCH3-212ENST00000466845 KLF16Q9BXK1 252 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-212ENST00000466845 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-212ENST00000466845 EMILIN1Q9Y6C2 1016 aa9.31□□□□□ -0.92
LRCH3-212ENST00000466845 POTECB2RU33 542 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms