RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ITSN1Q15811 1721 aa26.89■■□□□ 1.9
CCDC78-207ENST00000466708 ADAMTSL3P82987 1691 aa26.89■■□□□ 1.89
CCDC78-207ENST00000466708 U2AF1L5P0DN76 240 aaPredicted RBP26.88■■□□□ 1.89
CCDC78-207ENST00000466708 U2AF1Q01081 240 aaKnown RBP eCLIP26.88■■□□□ 1.89
CCDC78-207ENST00000466708 TCP11L2Q8N4U5 519 aa26.88■■□□□ 1.89
CCDC78-207ENST00000466708 WWC1Q8IX03 1113 aa26.88■■□□□ 1.89
CCDC78-207ENST00000466708 PRR36Q9H6K5 1346 aa26.87■■□□□ 1.89
CCDC78-207ENST00000466708 CCDC27Q2M243 656 aa26.87■■□□□ 1.89
CCDC78-207ENST00000466708 PIK3R4Q99570 1358 aa26.87■■□□□ 1.89
CCDC78-207ENST00000466708 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
CCDC78-207ENST00000466708 NKTRP30414 1462 aaKnown RBP26.86■■□□□ 1.89
CCDC78-207ENST00000466708 TOPAZ1Q8N9V7 1692 aa26.85■■□□□ 1.89
CCDC78-207ENST00000466708 ZNF142P52746 1687 aaPredicted RBP26.84■■□□□ 1.89
CCDC78-207ENST00000466708 CCDC136Q96JN2 1154 aa26.84■■□□□ 1.89
CCDC78-207ENST00000466708 PLEKHG3A1L390 1219 aa26.83■■□□□ 1.89
CCDC78-207ENST00000466708 DIAPH1O60610 1272 aaKnown RBP26.83■■□□□ 1.89
CCDC78-207ENST00000466708 WDR63Q8IWG1 891 aa26.83■■□□□ 1.89
CCDC78-207ENST00000466708 XRN1Q8IZH2 1706 aaKnown RBP26.83■■□□□ 1.88
CCDC78-207ENST00000466708 SPINK5Q9NQ38 1064 aaPredicted RBP26.82■■□□□ 1.88
CCDC78-207ENST00000466708 AATKQ6ZMQ8 1374 aa26.82■■□□□ 1.88
CCDC78-207ENST00000466708 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
CCDC78-207ENST00000466708 PNNQ9H307 717 aaKnown RBP26.81■■□□□ 1.88
CCDC78-207ENST00000466708 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
CCDC78-207ENST00000466708 POLKQ9UBT6 870 aa26.81■■□□□ 1.88
CCDC78-207ENST00000466708 U2SURPO15042 1029 aaKnown RBP26.8■■□□□ 1.88
CCDC78-207ENST00000466708 NME9Q86XW9 330 aa26.79■■□□□ 1.88
CCDC78-207ENST00000466708 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.79■■□□□ 1.88
CCDC78-207ENST00000466708 COG3Q96JB2 828 aa26.79■■□□□ 1.88
CCDC78-207ENST00000466708 MAP2P11137 1827 aaKnown RBP26.79■■□□□ 1.88
CCDC78-207ENST00000466708 ANKLE2Q86XL3 938 aa26.78■■□□□ 1.88
CCDC78-207ENST00000466708 EXOC6Q8TAG9 804 aa26.78■■□□□ 1.88
CCDC78-207ENST00000466708 PLEKHF1Q96S99 279 aa26.77■■□□□ 1.88
CCDC78-207ENST00000466708 NEUROD2Q15784 382 aa26.76■■□□□ 1.88
CCDC78-207ENST00000466708 RRP7AQ9Y3A4 280 aaKnown RBP26.76■■□□□ 1.88
CCDC78-207ENST00000466708 DMRT2Q9Y5R5 561 aa26.76■■□□□ 1.88
CCDC78-207ENST00000466708 ACEP12821 1306 aa26.76■■□□□ 1.87
CCDC78-207ENST00000466708 NRKQ7Z2Y5 1582 aa26.75■■□□□ 1.87
CCDC78-207ENST00000466708 PLIN1O60240 522 aa26.74■■□□□ 1.87
CCDC78-207ENST00000466708 CDK12Q9NYV4 1490 aaPredicted RBP26.73■■□□□ 1.87
CCDC78-207ENST00000466708 TTC21BQ7Z4L5 1316 aa26.73■■□□□ 1.87
CCDC78-207ENST00000466708 MAPK8IP3Q9UPT6 1336 aa26.73■■□□□ 1.87
CCDC78-207ENST00000466708 FCHSD2O94868 740 aa26.72■■□□□ 1.87
CCDC78-207ENST00000466708 USP6P35125 1406 aa26.72■■□□□ 1.87
CCDC78-207ENST00000466708 ZRANB1Q9UGI0 708 aa26.69■■□□□ 1.86
CCDC78-207ENST00000466708 ANKARQ7Z5J8 1434 aa26.69■■□□□ 1.86
CCDC78-207ENST00000466708 PPM1GO15355 546 aaPredicted RBP26.69■■□□□ 1.86
CCDC78-207ENST00000466708 KCNA6P17658 529 aa26.69■■□□□ 1.86
CCDC78-207ENST00000466708 TMPOP42166 694 aaKnown RBP26.69■■□□□ 1.86
CCDC78-207ENST00000466708 NUTM2FA1L443 756 aa26.68■■□□□ 1.86
CCDC78-207ENST00000466708 MYH16Q9H6N6 1097 aa26.68■■□□□ 1.86
CCDC78-207ENST00000466708 CHD2O14647 1828 aaKnown RBP26.68■■□□□ 1.86
CCDC78-207ENST00000466708 EMILIN1Q9Y6C2 1016 aa26.67■■□□□ 1.86
CCDC78-207ENST00000466708 FBLN1P23142 703 aa26.67■■□□□ 1.86
CCDC78-207ENST00000466708 CRBNQ96SW2 442 aa26.67■■□□□ 1.86
CCDC78-207ENST00000466708 SSH2Q76I76 1423 aa26.67■■□□□ 1.86
CCDC78-207ENST00000466708 TTC21AQ8NDW8 1320 aa26.66■■□□□ 1.86
CCDC78-207ENST00000466708 OVOS2A0A0J9YW53 1432 aa26.65■■□□□ 1.86
CCDC78-207ENST00000466708 OVOS2Q6IE36 1432 aa26.65■■□□□ 1.86
CCDC78-207ENST00000466708 NEFMP07197 916 aa26.65■■□□□ 1.86
CCDC78-207ENST00000466708 IL13P35225 146 aa26.63■■□□□ 1.85
CCDC78-207ENST00000466708 RSPH6AQ9H0K4 717 aa26.63■■□□□ 1.85
CCDC78-207ENST00000466708 LRRC7Q96NW7 1537 aa26.63■■□□□ 1.85
CCDC78-207ENST00000466708 IL16Q14005 1332 aa26.63■■□□□ 1.85
CCDC78-207ENST00000466708 NALCNQ8IZF0 1738 aa26.62■■□□□ 1.85
CCDC78-207ENST00000466708 FMN2Q9NZ56 1722 aa26.62■■□□□ 1.85
CCDC78-207ENST00000466708 C20orf194Q5TEA3 1177 aa26.62■■□□□ 1.85
CCDC78-207ENST00000466708 TRIM35Q9UPQ4 493 aa26.61■■□□□ 1.85
CCDC78-207ENST00000466708 RGPD8O14715 1765 aaPredicted RBP26.61■■□□□ 1.85
CCDC78-207ENST00000466708 USP31Q70CQ4 1352 aa26.61■■□□□ 1.85
CCDC78-207ENST00000466708 NGDNQ8NEJ9 315 aaKnown RBP26.6■■□□□ 1.85
CCDC78-207ENST00000466708 BCAR3O75815 825 aa26.59■■□□□ 1.85
CCDC78-207ENST00000466708 CT47B1P0C2W7 299 aaPredicted RBP26.59■■□□□ 1.85
CCDC78-207ENST00000466708 RIPK4P57078 832 aa26.59■■□□□ 1.85
CCDC78-207ENST00000466708 RRS1Q15050 365 aaKnown RBP26.59■■□□□ 1.85
CCDC78-207ENST00000466708 RBM19Q9Y4C8 960 aaKnown RBP26.59■■□□□ 1.85
CCDC78-207ENST00000466708 PRKAR2BP31323 418 aa26.58■■□□□ 1.85
CCDC78-207ENST00000466708 PMFBP1Q8TBY8 1022 aa26.58■■□□□ 1.85
CCDC78-207ENST00000466708 NPHP4O75161 1426 aaPredicted RBP26.57■■□□□ 1.84
CCDC78-207ENST00000466708 PDE3AQ14432 1141 aa26.56■■□□□ 1.84
CCDC78-207ENST00000466708 RARSP54136 660 aaKnown RBP26.55■■□□□ 1.84
CCDC78-207ENST00000466708 NFE2L2Q16236 605 aa26.53■■□□□ 1.84
CCDC78-207ENST00000466708 HMOX1P09601 288 aa26.52■■□□□ 1.84
CCDC78-207ENST00000466708 FANCIQ9NVI1 1328 aa26.51■■□□□ 1.84
CCDC78-207ENST00000466708 ADGRL3Q9HAR2 1447 aa26.49■■□□□ 1.83
CCDC78-207ENST00000466708 CANXP27824 592 aaKnown RBP26.49■■□□□ 1.83
CCDC78-207ENST00000466708 CALD1Q05682 793 aaKnown RBP26.49■■□□□ 1.83
CCDC78-207ENST00000466708 PHACTR3Q96KR7 559 aa26.48■■□□□ 1.83
CCDC78-207ENST00000466708 PIK3C2AO00443 1686 aa26.47■■□□□ 1.83
CCDC78-207ENST00000466708 EIF4A2Q14240 407 aaKnown RBP26.46■■□□□ 1.83
CCDC78-207ENST00000466708 LMOD3Q0VAK6 560 aa26.46■■□□□ 1.83
CCDC78-207ENST00000466708 USP54Q70EL1 1684 aa26.46■■□□□ 1.83
CCDC78-207ENST00000466708 PEAK1Q9H792 1746 aa26.45■■□□□ 1.83
CCDC78-207ENST00000466708 TSR2Q969E8 191 aaKnown RBP26.45■■□□□ 1.82
CCDC78-207ENST00000466708 NWD1Q149M9 1564 aa26.44■■□□□ 1.82
CCDC78-207ENST00000466708 SBNO1A3KN83 1393 aa26.44■■□□□ 1.82
CCDC78-207ENST00000466708 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
CCDC78-207ENST00000466708 PHF8Q9UPP1 1060 aa26.44■■□□□ 1.82
CCDC78-207ENST00000466708 AAMPQ13685 434 aa26.43■■□□□ 1.82
CCDC78-207ENST00000466708 FLT4P35916 1363 aa26.42■■□□□ 1.82
CCDC78-207ENST00000466708 CENPQQ7L2Z9 268 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms