RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 OSBPP22059 807 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 PIP4K2BP78356 416 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 TRIM26Q12899 539 aaPredicted RBP5.43□□□□□ -1.54
SORT1-202ENST00000466471 AMHR2Q16671 573 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 NUDT18Q6ZVK8 323 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 ZNF516Q92618 1163 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 PRKD2Q9BZL6 878 aa5.43□□□□□ -1.54
SORT1-202ENST00000466471 RNF17Q9BXT8 1623 aaKnown RBP5.43□□□□□ -1.54
SORT1-202ENST00000466471 A6NJR5 290 aa5.42□□□□□ -1.54
SORT1-202ENST00000466471 RBM26Q5T8P6 1007 aaKnown RBP5.42□□□□□ -1.54
SORT1-202ENST00000466471 IL21Q9HBE4 155 aa5.42□□□□□ -1.54
SORT1-202ENST00000466471 MAGI2Q86UL8 1455 aa5.42□□□□□ -1.54
SORT1-202ENST00000466471 SETBP1Q9Y6X0 1596 aa5.42□□□□□ -1.54
SORT1-202ENST00000466471 SUPT6HQ7KZ85 1726 aaKnown RBP5.41□□□□□ -1.54
SORT1-202ENST00000466471 APLP1P51693 650 aa5.41□□□□□ -1.54
SORT1-202ENST00000466471 HDGFP51858 240 aaKnown RBP5.41□□□□□ -1.54
SORT1-202ENST00000466471 MYT1Q01538 1121 aa5.41□□□□□ -1.54
SORT1-202ENST00000466471 PPP1R18Q6NYC8 613 aa5.41□□□□□ -1.54
SORT1-202ENST00000466471 ABCA8O94911 1581 aa5.41□□□□□ -1.54
SORT1-202ENST00000466471 DENND4BO75064 1496 aaPredicted RBP5.4□□□□□ -1.54
SORT1-202ENST00000466471 CEP350Q5VT06 3117 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 LRRC7Q96NW7 1537 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 ZBTB7CA1YPR0 619 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 LCE2BO14633 110 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 MAP2K5Q13163 448 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 PADI6Q6TGC4 694 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 NPM2Q86SE8 214 aaKnown RBP5.4□□□□□ -1.54
SORT1-202ENST00000466471 NKX2-3Q8TAU0 364 aa5.4□□□□□ -1.54
SORT1-202ENST00000466471 CFAP74Q9C0B2 1584 aa5.4□□□□□ -1.55
SORT1-202ENST00000466471 RAPGEF2Q9Y4G8 1499 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 EP400Q96L91 3159 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 SYNMO15061 1565 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 RAPGEF6Q8TEU7 1601 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 GPR37O15354 613 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 PDIA4P13667 645 aaKnown RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 MLLT3P42568 568 aaPredicted RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 LAPTM4AQ15012 233 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 SWT1Q5T5J6 900 aaKnown RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 TRAF7Q6Q0C0 670 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 NPDC1Q9NQX5 325 aaPredicted RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 CCDC9Q9Y3X0 531 aaKnown RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 POLR1AO95602 1720 aaPredicted RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 TRAPPC8Q9Y2L5 1435 aa5.39□□□□□ -1.55
SORT1-202ENST00000466471 CDK12Q9NYV4 1490 aaPredicted RBP5.39□□□□□ -1.55
SORT1-202ENST00000466471 UGGT2Q9NYU1 1516 aa5.38□□□□□ -1.55
SORT1-202ENST00000466471 HECW1Q76N89 1606 aa5.38□□□□□ -1.55
SORT1-202ENST00000466471 MYO3AQ8NEV4 1616 aa5.38□□□□□ -1.55
SORT1-202ENST00000466471 CEBPAP49715 358 aaPredicted RBP5.38□□□□□ -1.55
SORT1-202ENST00000466471 COPS2P61201 443 aa5.38□□□□□ -1.55
SORT1-202ENST00000466471 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.38□□□□□ -1.55
SORT1-202ENST00000466471 C9orf84Q5VXU9 1444 aa5.38□□□□□ -1.55
SORT1-202ENST00000466471 VWDEQ8N2E2 1590 aa5.38□□□□□ -1.55
SORT1-202ENST00000466471 TTC13Q8NBP0 860 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 FAM117AQ9C073 453 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 C1orf115Q9H7X2 142 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 RBM27Q9P2N5 1060 aaKnown RBP5.37□□□□□ -1.55
SORT1-202ENST00000466471 TTBK1Q5TCY1 1321 aaPredicted RBP5.37□□□□□ -1.55
SORT1-202ENST00000466471 SHANK2Q9UPX8 1470 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 NEURL4Q96JN8 1562 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 REREQ9P2R6 1566 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 MROH2AA6NES4 1674 aa5.37□□□□□ -1.55
SORT1-202ENST00000466471 PLEKHG3A1L390 1219 aa5.36□□□□□ -1.55
SORT1-202ENST00000466471 APBB1O00213 710 aa5.36□□□□□ -1.55
SORT1-202ENST00000466471 IRF6O14896 467 aa5.36□□□□□ -1.55
SORT1-202ENST00000466471 V9GY48 417 aaPredicted RBP5.36□□□□□ -1.55
SORT1-202ENST00000466471 NPATQ14207 1427 aa5.36□□□□□ -1.55
SORT1-202ENST00000466471 CEP170BQ9Y4F5 1589 aaPredicted RBP5.35□□□□□ -1.55
SORT1-202ENST00000466471 AGLP35573 1532 aa5.35□□□□□ -1.55
SORT1-202ENST00000466471 ATP10AO60312 1499 aa5.35□□□□□ -1.55
SORT1-202ENST00000466471 NRG2O14511 850 aaPredicted RBP5.35□□□□□ -1.55
SORT1-202ENST00000466471 HIC1Q14526 733 aa5.35□□□□□ -1.55
SORT1-202ENST00000466471 SLF2Q8IX21 1173 aa5.35□□□□□ -1.55
SORT1-202ENST00000466471 TRAK2O60296 914 aa5.34□□□□□ -1.55
SORT1-202ENST00000466471 ZEB1P37275 1124 aaPredicted RBP5.34□□□□□ -1.55
SORT1-202ENST00000466471 MLECQ14165 292 aa5.34□□□□□ -1.55
SORT1-202ENST00000466471 PARP9Q8IXQ6 854 aa5.34□□□□□ -1.55
SORT1-202ENST00000466471 CCDC102AQ96A19 550 aa5.34□□□□□ -1.55
SORT1-202ENST00000466471 EYA1Q99502 592 aa5.34□□□□□ -1.55
SORT1-202ENST00000466471 PDZRN3Q9UPQ7 1066 aa5.34□□□□□ -1.55
SORT1-202ENST00000466471 STRCP1A6NGW2 1772 aa5.34□□□□□ -1.56
SORT1-202ENST00000466471 NHSL1Q5SYE7 1610 aa5.34□□□□□ -1.56
SORT1-202ENST00000466471 GNPATO15228 680 aa5.33□□□□□ -1.56
SORT1-202ENST00000466471 GGCXP38435 758 aa5.33□□□□□ -1.56
SORT1-202ENST00000466471 KCTD17Q8N5Z5 321 aa5.33□□□□□ -1.56
SORT1-202ENST00000466471 NECTIN2Q92692 538 aa5.33□□□□□ -1.56
SORT1-202ENST00000466471 ZPR1O75312 459 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 FCHSD2O94868 740 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 SLC4A3P48751 1232 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 PCMTD1Q96MG8 357 aaPredicted RBP5.32□□□□□ -1.56
SORT1-202ENST00000466471 ARID3AQ99856 593 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 TRAIPQ9BWF2 469 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 PCDHB3Q9Y5E6 796 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 KDM5CP41229 1560 aa5.32□□□□□ -1.56
SORT1-202ENST00000466471 CDK13Q14004 1512 aaKnown RBP5.32□□□□□ -1.56
SORT1-202ENST00000466471 XIRP1Q702N8 1843 aaKnown RBP5.32□□□□□ -1.56
SORT1-202ENST00000466471 BLOC1S3Q6QNY0 202 aa5.31□□□□□ -1.56
SORT1-202ENST00000466471 SERPINA10Q9UK55 444 aa5.31□□□□□ -1.56
SORT1-202ENST00000466471 CNTLNQ9NXG0 1405 aa5.31□□□□□ -1.56
SORT1-202ENST00000466471 DIP2CQ9Y2E4 1556 aa5.3□□□□□ -1.56
SORT1-202ENST00000466471 FAM161AQ3B820 660 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms