RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-205ENST00000466260 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
RTFDC1-205ENST00000466260 AFF2P51816 1311 aa13.8□□□□□ -0.2
RTFDC1-205ENST00000466260 CABLES1Q8TDN4 633 aa13.79□□□□□ -0.2
RTFDC1-205ENST00000466260 EVC2Q86UK5 1308 aa13.79□□□□□ -0.2
RTFDC1-205ENST00000466260 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
RTFDC1-205ENST00000466260 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-205ENST00000466260 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
RTFDC1-205ENST00000466260 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
RTFDC1-205ENST00000466260 AKAP12Q02952 1782 aa13.78□□□□□ -0.2
RTFDC1-205ENST00000466260 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
RTFDC1-205ENST00000466260 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
RTFDC1-205ENST00000466260 ACEP12821 1306 aa13.78□□□□□ -0.2
RTFDC1-205ENST00000466260 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
RTFDC1-205ENST00000466260 ARHGEF10O15013 1369 aa13.76□□□□□ -0.21
RTFDC1-205ENST00000466260 NUTM2GQ5VZR2 741 aa13.76□□□□□ -0.21
RTFDC1-205ENST00000466260 ZNF772Q68DY9 489 aaPredicted RBP13.76□□□□□ -0.21
RTFDC1-205ENST00000466260 POLR3AO14802 1390 aaPredicted RBP13.74□□□□□ -0.21
RTFDC1-205ENST00000466260 USP47Q96K76 1375 aa13.74□□□□□ -0.21
RTFDC1-205ENST00000466260 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
RTFDC1-205ENST00000466260 MON2Q7Z3U7 1717 aa13.73□□□□□ -0.21
RTFDC1-205ENST00000466260 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
RTFDC1-205ENST00000466260 USP21Q9UK80 565 aa13.73□□□□□ -0.21
RTFDC1-205ENST00000466260 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.73□□□□□ -0.21
RTFDC1-205ENST00000466260 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
RTFDC1-205ENST00000466260 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-205ENST00000466260 PIK3C2AO00443 1686 aa13.72□□□□□ -0.21
RTFDC1-205ENST00000466260 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
RTFDC1-205ENST00000466260 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.21
RTFDC1-205ENST00000466260 NRKQ7Z2Y5 1582 aa13.71□□□□□ -0.21
RTFDC1-205ENST00000466260 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.21
RTFDC1-205ENST00000466260 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
RTFDC1-205ENST00000466260 USP6P35125 1406 aa13.71□□□□□ -0.22
RTFDC1-205ENST00000466260 SOCS7O14512 581 aa13.7□□□□□ -0.22
RTFDC1-205ENST00000466260 QTRT2Q9H974 415 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-205ENST00000466260 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
RTFDC1-205ENST00000466260 COL14A1Q05707 1796 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-205ENST00000466260 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
RTFDC1-205ENST00000466260 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
RTFDC1-205ENST00000466260 RXRBP28702 533 aa13.69□□□□□ -0.22
RTFDC1-205ENST00000466260 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
RTFDC1-205ENST00000466260 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
RTFDC1-205ENST00000466260 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
RTFDC1-205ENST00000466260 ZEB1P37275 1124 aaPredicted RBP13.68□□□□□ -0.22
RTFDC1-205ENST00000466260 SLIT2O94813 1529 aa13.67□□□□□ -0.22
RTFDC1-205ENST00000466260 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-205ENST00000466260 RGS12O14924 1447 aa13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 FNBP4Q8N3X1 1017 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 TESK2Q96S53 571 aa13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
RTFDC1-205ENST00000466260 ATRNO75882 1429 aa13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 SOX12O15370 315 aa13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 GLI3P10071 1580 aa13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 MYOM1P52179 1685 aa13.65□□□□□ -0.22
RTFDC1-205ENST00000466260 RGPD5Q99666 1765 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 NLRP6P59044 892 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 TMF1P82094 1093 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
RTFDC1-205ENST00000466260 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
RTFDC1-205ENST00000466260 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-205ENST00000466260 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
RTFDC1-205ENST00000466260 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
RTFDC1-205ENST00000466260 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
RTFDC1-205ENST00000466260 A0A1W2PP64 1363 aa13.62□□□□□ -0.23
RTFDC1-205ENST00000466260 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
RTFDC1-205ENST00000466260 LTN1O94822 1766 aa13.62□□□□□ -0.23
RTFDC1-205ENST00000466260 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
RTFDC1-205ENST00000466260 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
RTFDC1-205ENST00000466260 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
RTFDC1-205ENST00000466260 SLIT3O75094 1523 aa13.61□□□□□ -0.23
RTFDC1-205ENST00000466260 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
RTFDC1-205ENST00000466260 USP19O94966 1318 aa13.61□□□□□ -0.23
RTFDC1-205ENST00000466260 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
RTFDC1-205ENST00000466260 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
RTFDC1-205ENST00000466260 A0A0G2JS52 829 aa13.6□□□□□ -0.23
RTFDC1-205ENST00000466260 MYT1Q01538 1121 aa13.6□□□□□ -0.23
RTFDC1-205ENST00000466260 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
RTFDC1-205ENST00000466260 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
RTFDC1-205ENST00000466260 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
RTFDC1-205ENST00000466260 GCP02774 474 aa13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 EIF4G2P78344 907 aaKnown RBP eCLIP13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 NME9Q86XW9 330 aa13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
RTFDC1-205ENST00000466260 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms