RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
VCP-204ENST00000466100 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
VCP-204ENST00000466100 FOXO3O43524 673 aa15.36■□□□□ 0.05
VCP-204ENST00000466100 NPHP3Q7Z494 1330 aa15.36■□□□□ 0.05
VCP-204ENST00000466100 DDX17Q92841 729 aaKnown RBP15.35■□□□□ 0.05
VCP-204ENST00000466100 SOS2Q07890 1332 aaPredicted RBP15.35■□□□□ 0.05
VCP-204ENST00000466100 TTC21BQ7Z4L5 1316 aa15.34■□□□□ 0.05
VCP-204ENST00000466100 SBNO1A3KN83 1393 aa15.34■□□□□ 0.05
VCP-204ENST00000466100 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
VCP-204ENST00000466100 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
VCP-204ENST00000466100 ABCA3Q99758 1704 aa15.33■□□□□ 0.04
VCP-204ENST00000466100 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
VCP-204ENST00000466100 TTC21AQ8NDW8 1320 aa15.32■□□□□ 0.04
VCP-204ENST00000466100 OVOS2A0A0J9YW53 1432 aa15.32■□□□□ 0.04
VCP-204ENST00000466100 TNS3Q68CZ2 1445 aa15.32■□□□□ 0.04
VCP-204ENST00000466100 OVOS2Q6IE36 1432 aa15.32■□□□□ 0.04
VCP-204ENST00000466100 COL22A1Q8NFW1 1626 aaPredicted RBP15.32■□□□□ 0.04
VCP-204ENST00000466100 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
VCP-204ENST00000466100 XPCQ01831 940 aaPredicted RBP15.31■□□□□ 0.04
VCP-204ENST00000466100 PSME1Q06323 249 aa15.31■□□□□ 0.04
VCP-204ENST00000466100 KRT28Q7Z3Y7 464 aa15.31■□□□□ 0.04
VCP-204ENST00000466100 PHRF1Q9P1Y6 1649 aaKnown RBP15.31■□□□□ 0.04
VCP-204ENST00000466100 NSD2O96028 1365 aa15.3■□□□□ 0.04
VCP-204ENST00000466100 CGNL1Q0VF96 1302 aa15.3■□□□□ 0.04
VCP-204ENST00000466100 SHPRHQ149N8 1683 aa15.29■□□□□ 0.04
VCP-204ENST00000466100 USP31Q70CQ4 1352 aa15.29■□□□□ 0.04
VCP-204ENST00000466100 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
VCP-204ENST00000466100 SLIT3O75094 1523 aa15.28■□□□□ 0.04
VCP-204ENST00000466100 SPATA31A3Q5VYP0 1347 aa15.28■□□□□ 0.04
VCP-204ENST00000466100 FYB1O15117 783 aa15.28■□□□□ 0.04
VCP-204ENST00000466100 NME9Q86XW9 330 aa15.28■□□□□ 0.04
VCP-204ENST00000466100 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.28■□□□□ 0.04
VCP-204ENST00000466100 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
VCP-204ENST00000466100 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
VCP-204ENST00000466100 NFAT5O94916 1531 aa15.26■□□□□ 0.03
VCP-204ENST00000466100 ARHGEF10O15013 1369 aa15.25■□□□□ 0.03
VCP-204ENST00000466100 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
VCP-204ENST00000466100 USP19O94966 1318 aa15.25■□□□□ 0.03
VCP-204ENST00000466100 MAP2P11137 1827 aaKnown RBP15.25■□□□□ 0.03
VCP-204ENST00000466100 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
VCP-204ENST00000466100 PAK3O75914 559 aaPredicted RBP15.24■□□□□ 0.03
VCP-204ENST00000466100 LTN1O94822 1766 aa15.24■□□□□ 0.03
VCP-204ENST00000466100 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
VCP-204ENST00000466100 CC2D1BQ5T0F9 858 aaKnown RBP15.23■□□□□ 0.03
VCP-204ENST00000466100 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
VCP-204ENST00000466100 ABTB2Q8N961 1025 aa15.23■□□□□ 0.03
VCP-204ENST00000466100 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
VCP-204ENST00000466100 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
VCP-204ENST00000466100 HSPA1LP34931 641 aa15.2■□□□□ 0.02
VCP-204ENST00000466100 NLRP6P59044 892 aa15.2■□□□□ 0.02
VCP-204ENST00000466100 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
VCP-204ENST00000466100 COG3Q96JB2 828 aa15.2■□□□□ 0.02
VCP-204ENST00000466100 PRKRIP1Q9H875 184 aaPredicted RBP15.2■□□□□ 0.02
VCP-204ENST00000466100 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
VCP-204ENST00000466100 NLRP13Q86W25 1043 aa15.19■□□□□ 0.02
VCP-204ENST00000466100 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
VCP-204ENST00000466100 COL18A1P39060 1754 aa15.19■□□□□ 0.02
VCP-204ENST00000466100 FBXO41Q8TF61 875 aa15.18■□□□□ 0.02
VCP-204ENST00000466100 JCADQ9P266 1359 aa15.17■□□□□ 0.02
VCP-204ENST00000466100 RALBP1Q15311 655 aa15.17■□□□□ 0.02
VCP-204ENST00000466100 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
VCP-204ENST00000466100 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
VCP-204ENST00000466100 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
VCP-204ENST00000466100 ABCC6O95255 1503 aa15.16■□□□□ 0.02
VCP-204ENST00000466100 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
VCP-204ENST00000466100 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
VCP-204ENST00000466100 ANP32CO43423 234 aa15.15■□□□□ 0.02
VCP-204ENST00000466100 CABLES1Q8TDN4 633 aa15.15■□□□□ 0.02
VCP-204ENST00000466100 GCP02774 474 aa15.14■□□□□ 0.01
VCP-204ENST00000466100 FBLN1P23142 703 aa15.14■□□□□ 0.01
VCP-204ENST00000466100 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
VCP-204ENST00000466100 COL3A1P02461 1466 aaPredicted RBP15.14■□□□□ 0.01
VCP-204ENST00000466100 CDK12Q9NYV4 1490 aaPredicted RBP15.14■□□□□ 0.01
VCP-204ENST00000466100 CPDO75976 1380 aa15.13■□□□□ 0.01
VCP-204ENST00000466100 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
VCP-204ENST00000466100 LRP6O75581 1613 aa15.13■□□□□ 0.01
VCP-204ENST00000466100 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
VCP-204ENST00000466100 PLCH1Q4KWH8 1693 aa15.12■□□□□ 0.01
VCP-204ENST00000466100 COL14A1Q05707 1796 aaKnown RBP15.12■□□□□ 0.01
VCP-204ENST00000466100 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
VCP-204ENST00000466100 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
VCP-204ENST00000466100 ARHGEF25Q86VW2 580 aa15.11■□□□□ 0.01
VCP-204ENST00000466100 POLKQ9UBT6 870 aa15.11■□□□□ 0.01
VCP-204ENST00000466100 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
VCP-204ENST00000466100 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
VCP-204ENST00000466100 NRAPQ86VF7 1730 aa15.1■□□□□ 0.01
VCP-204ENST00000466100 SOX12O15370 315 aa15.1■□□□□ 0.01
VCP-204ENST00000466100 RRS1Q15050 365 aaKnown RBP15.1■□□□□ 0.01
VCP-204ENST00000466100 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
VCP-204ENST00000466100 SPATA31A6Q5VVP1 1343 aa15.1■□□□□ 0.01
VCP-204ENST00000466100 INSRP06213 1382 aa15.1■□□□□ 0.01
VCP-204ENST00000466100 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
VCP-204ENST00000466100 NWD2Q9ULI1 1742 aa15.09■□□□□ 0.01
VCP-204ENST00000466100 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
VCP-204ENST00000466100 MIER1Q8N108 512 aa15.09■□□□□ 0.01
VCP-204ENST00000466100 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
VCP-204ENST00000466100 FAM208AQ9UK61 1670 aaKnown RBP15.08■□□□□ 0
VCP-204ENST00000466100 FLT4P35916 1363 aa15.08■□□□□ 0
VCP-204ENST00000466100 RGPD2P0DJD1 1756 aa15.08■□□□□ 0
VCP-204ENST00000466100 CAMTA1Q9Y6Y1 1673 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms