RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TIMP2P16035 220 aa10.63□□□□□ -0.71
LRCH3-211ENST00000466054 SUZ12Q15022 739 aaKnown RBP10.63□□□□□ -0.71
LRCH3-211ENST00000466054 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
LRCH3-211ENST00000466054 UPP2O95045 317 aa10.62□□□□□ -0.71
LRCH3-211ENST00000466054 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
LRCH3-211ENST00000466054 MPNDQ8N594 471 aa10.62□□□□□ -0.71
LRCH3-211ENST00000466054 PCDHGC3Q9UN70 934 aa10.62□□□□□ -0.71
LRCH3-211ENST00000466054 VSIG8P0DPA2 414 aa10.61□□□□□ -0.71
LRCH3-211ENST00000466054 CTHP32929 405 aa10.61□□□□□ -0.71
LRCH3-211ENST00000466054 C6orf118Q5T5N4 469 aa10.61□□□□□ -0.71
LRCH3-211ENST00000466054 PRR7Q8TB68 274 aa10.61□□□□□ -0.71
LRCH3-211ENST00000466054 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
LRCH3-211ENST00000466054 ZIC2O95409 532 aaPredicted RBP10.58□□□□□ -0.72
LRCH3-211ENST00000466054 MTMR2Q13614 643 aa10.58□□□□□ -0.72
LRCH3-211ENST00000466054 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
LRCH3-211ENST00000466054 SPDYE5A6NIY4 337 aa10.57□□□□□ -0.72
LRCH3-211ENST00000466054 BMP2P12643 396 aa10.57□□□□□ -0.72
LRCH3-211ENST00000466054 KCNMA1Q12791 1236 aa10.57□□□□□ -0.72
LRCH3-211ENST00000466054 AGERQ15109 404 aa10.57□□□□□ -0.72
LRCH3-211ENST00000466054 NDUFV2P19404 249 aa10.56□□□□□ -0.72
LRCH3-211ENST00000466054 RNF225M0QZC1 329 aaPredicted RBP10.55□□□□□ -0.72
LRCH3-211ENST00000466054 TMEM151AQ8N4L1 468 aa10.55□□□□□ -0.72
LRCH3-211ENST00000466054 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
LRCH3-211ENST00000466054 PPFIA3O75145 1194 aa10.54□□□□□ -0.72
LRCH3-211ENST00000466054 SSTR3P32745 418 aaPredicted RBP10.54□□□□□ -0.72
LRCH3-211ENST00000466054 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
LRCH3-211ENST00000466054 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
LRCH3-211ENST00000466054 NR5A1Q13285 461 aa10.53□□□□□ -0.72
LRCH3-211ENST00000466054 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
LRCH3-211ENST00000466054 MOXD2PA6NHM9 499 aa10.52□□□□□ -0.73
LRCH3-211ENST00000466054 GDF11O95390 407 aa10.52□□□□□ -0.73
LRCH3-211ENST00000466054 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-211ENST00000466054 SPTLC1O15269 473 aa10.51□□□□□ -0.73
LRCH3-211ENST00000466054 KLF16Q9BXK1 252 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-211ENST00000466054 LINC00528Q8N1L1 170 aa10.5□□□□□ -0.73
LRCH3-211ENST00000466054 FOXJ1Q92949 421 aa10.5□□□□□ -0.73
LRCH3-211ENST00000466054 CDK15Q96Q40 435 aa10.5□□□□□ -0.73
LRCH3-211ENST00000466054 RASSF7Q02833 373 aa10.49□□□□□ -0.73
LRCH3-211ENST00000466054 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
LRCH3-211ENST00000466054 BPHLQ86WA6 291 aaPredicted RBP10.47□□□□□ -0.73
LRCH3-211ENST00000466054 NR3C2P08235 984 aa10.46□□□□□ -0.73
LRCH3-211ENST00000466054 CNTNAP3BQ96NU0 1288 aa10.46□□□□□ -0.73
LRCH3-211ENST00000466054 CNTNAP3Q9BZ76 1288 aa10.46□□□□□ -0.73
LRCH3-211ENST00000466054 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
LRCH3-211ENST00000466054 MAP10Q9P2G4 905 aa10.45□□□□□ -0.74
LRCH3-211ENST00000466054 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.74
LRCH3-211ENST00000466054 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
LRCH3-211ENST00000466054 ADAMTS8Q9UP79 889 aa10.44□□□□□ -0.74
LRCH3-211ENST00000466054 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
LRCH3-211ENST00000466054 SVOPQ8N4V2 548 aa10.43□□□□□ -0.74
LRCH3-211ENST00000466054 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
LRCH3-211ENST00000466054 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
LRCH3-211ENST00000466054 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-211ENST00000466054 FSHRP23945 695 aa10.42□□□□□ -0.74
LRCH3-211ENST00000466054 GSK3AP49840 483 aa10.42□□□□□ -0.74
LRCH3-211ENST00000466054 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
LRCH3-211ENST00000466054 GRM5P41594 1212 aa10.41□□□□□ -0.74
LRCH3-211ENST00000466054 TSC1Q92574 1164 aa10.41□□□□□ -0.74
LRCH3-211ENST00000466054 ZBTB3Q9H5J0 574 aa10.41□□□□□ -0.74
LRCH3-211ENST00000466054 TTLL8A6PVC2 850 aa10.4□□□□□ -0.74
LRCH3-211ENST00000466054 VASH1Q7L8A9 365 aaPredicted RBP10.4□□□□□ -0.74
LRCH3-211ENST00000466054 CFAP99D6REC4 459 aa10.39□□□□□ -0.75
LRCH3-211ENST00000466054 GJA5P36382 358 aa10.39□□□□□ -0.75
LRCH3-211ENST00000466054 GPAT2Q6NUI2 795 aa10.39□□□□□ -0.75
LRCH3-211ENST00000466054 ARMC2Q8NEN0 867 aa10.39□□□□□ -0.75
LRCH3-211ENST00000466054 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
LRCH3-211ENST00000466054 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
LRCH3-211ENST00000466054 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
LRCH3-211ENST00000466054 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-211ENST00000466054 PTSQ03393 145 aa10.38□□□□□ -0.75
LRCH3-211ENST00000466054 RSBN1LQ6PCB5 846 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-211ENST00000466054 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
LRCH3-211ENST00000466054 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
LRCH3-211ENST00000466054 KRT76Q01546 638 aa10.37□□□□□ -0.75
LRCH3-211ENST00000466054 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
LRCH3-211ENST00000466054 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
LRCH3-211ENST00000466054 MAGEB6P1A0A0J9YX57 407 aa10.36□□□□□ -0.75
LRCH3-211ENST00000466054 FIGNL2A6NMB9 653 aa10.36□□□□□ -0.75
LRCH3-211ENST00000466054 IRS1P35568 1242 aa10.36□□□□□ -0.75
LRCH3-211ENST00000466054 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
LRCH3-211ENST00000466054 PCDHB15Q9Y5E8 787 aa10.36□□□□□ -0.75
LRCH3-211ENST00000466054 HRCP23327 699 aa10.35□□□□□ -0.75
LRCH3-211ENST00000466054 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
LRCH3-211ENST00000466054 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
LRCH3-211ENST00000466054 DNMT3AQ9Y6K1 912 aaPredicted RBP10.34□□□□□ -0.75
LRCH3-211ENST00000466054 CDC14CA4D256 554 aa10.33□□□□□ -0.76
LRCH3-211ENST00000466054 IGHA1P01876 353 aa10.33□□□□□ -0.76
LRCH3-211ENST00000466054 ZNF385CQ66K41 422 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-211ENST00000466054 CCDC155Q8N6L0 562 aa10.33□□□□□ -0.76
LRCH3-211ENST00000466054 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
LRCH3-211ENST00000466054 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
LRCH3-211ENST00000466054 NUTM2BA6NNL0 878 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-211ENST00000466054 NUTM2EB1AL46 878 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-211ENST00000466054 AMHR2Q16671 573 aa10.32□□□□□ -0.76
LRCH3-211ENST00000466054 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-211ENST00000466054 PRPF38BQ5VTL8 546 aaKnown RBP10.32□□□□□ -0.76
LRCH3-211ENST00000466054 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-211ENST00000466054 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
LRCH3-211ENST00000466054 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
LRCH3-211ENST00000466054 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms