RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 AFF2P51816 1311 aa14.91□□□□□ -0.02
NPHP3-203ENST00000465756 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
NPHP3-203ENST00000465756 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
NPHP3-203ENST00000465756 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
NPHP3-203ENST00000465756 USP21Q9UK80 565 aa14.9□□□□□ -0.02
NPHP3-203ENST00000465756 ST20-MTHFSA0A0A6YYL1 179 aa14.9□□□□□ -0.02
NPHP3-203ENST00000465756 PXDNQ92626 1479 aa14.9□□□□□ -0.02
NPHP3-203ENST00000465756 POLR3AO14802 1390 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-203ENST00000465756 RBM6P78332 1123 aaKnown RBP14.89□□□□□ -0.03
NPHP3-203ENST00000465756 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
NPHP3-203ENST00000465756 KTN1Q86UP2 1357 aaKnown RBP14.89□□□□□ -0.03
NPHP3-203ENST00000465756 POLR3GLQ9BT43 218 aa14.89□□□□□ -0.03
NPHP3-203ENST00000465756 EVA1CP58658 441 aa14.88□□□□□ -0.03
NPHP3-203ENST00000465756 NLRP6P59044 892 aa14.88□□□□□ -0.03
NPHP3-203ENST00000465756 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
NPHP3-203ENST00000465756 A0A0G2JS52 829 aa14.86□□□□□ -0.03
NPHP3-203ENST00000465756 MYT1Q01538 1121 aa14.86□□□□□ -0.03
NPHP3-203ENST00000465756 QTRT2Q9H974 415 aaKnown RBP14.86□□□□□ -0.03
NPHP3-203ENST00000465756 UNC5CLQ8IV45 518 aa14.83□□□□□ -0.03
NPHP3-203ENST00000465756 COL22A1Q8NFW1 1626 aaPredicted RBP14.83□□□□□ -0.04
NPHP3-203ENST00000465756 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
NPHP3-203ENST00000465756 COG3Q96JB2 828 aa14.83□□□□□ -0.04
NPHP3-203ENST00000465756 USP6P35125 1406 aa14.83□□□□□ -0.04
NPHP3-203ENST00000465756 TTC21BQ7Z4L5 1316 aa14.82□□□□□ -0.04
NPHP3-203ENST00000465756 C11orf95C9JLR9 678 aaPredicted RBP14.82□□□□□ -0.04
NPHP3-203ENST00000465756 FNBP4Q8N3X1 1017 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-203ENST00000465756 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
NPHP3-203ENST00000465756 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
NPHP3-203ENST00000465756 SOCS7O14512 581 aa14.79□□□□□ -0.04
NPHP3-203ENST00000465756 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
NPHP3-203ENST00000465756 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
NPHP3-203ENST00000465756 CGNL1Q0VF96 1302 aa14.78□□□□□ -0.04
NPHP3-203ENST00000465756 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
NPHP3-203ENST00000465756 USP32Q8NFA0 1604 aa14.78□□□□□ -0.04
NPHP3-203ENST00000465756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
NPHP3-203ENST00000465756 HSPA5P11021 654 aaKnown RBP14.77□□□□□ -0.04
NPHP3-203ENST00000465756 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.04
NPHP3-203ENST00000465756 VPS72Q15906 364 aa14.77□□□□□ -0.04
NPHP3-203ENST00000465756 RGPD8O14715 1765 aaPredicted RBP14.77□□□□□ -0.05
NPHP3-203ENST00000465756 LRP6O75581 1613 aa14.77□□□□□ -0.05
NPHP3-203ENST00000465756 NUTM2GQ5VZR2 741 aa14.77□□□□□ -0.05
NPHP3-203ENST00000465756 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
NPHP3-203ENST00000465756 CDCA7Q9BWT1 371 aaPredicted RBP14.77□□□□□ -0.05
NPHP3-203ENST00000465756 GCP02774 474 aa14.76□□□□□ -0.05
NPHP3-203ENST00000465756 ZC3H6P61129 1189 aaKnown RBP14.76□□□□□ -0.05
NPHP3-203ENST00000465756 TESK2Q96S53 571 aa14.76□□□□□ -0.05
NPHP3-203ENST00000465756 SLC12A5Q9H2X9 1139 aa14.75□□□□□ -0.05
NPHP3-203ENST00000465756 USP19O94966 1318 aa14.75□□□□□ -0.05
NPHP3-203ENST00000465756 GJD4Q96KN9 370 aaPredicted RBP14.75□□□□□ -0.05
NPHP3-203ENST00000465756 BTG4Q9NY30 223 aa14.75□□□□□ -0.05
NPHP3-203ENST00000465756 CPDO75976 1380 aa14.74□□□□□ -0.05
NPHP3-203ENST00000465756 KNSTRNQ9Y448 316 aa14.74□□□□□ -0.05
NPHP3-203ENST00000465756 STRN4Q9NRL3 753 aa14.74□□□□□ -0.05
NPHP3-203ENST00000465756 AMPHP49418 695 aa14.73□□□□□ -0.05
NPHP3-203ENST00000465756 POTEAQ6S8J7 498 aa14.73□□□□□ -0.05
NPHP3-203ENST00000465756 COL14A1Q05707 1796 aaKnown RBP14.73□□□□□ -0.05
NPHP3-203ENST00000465756 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
NPHP3-203ENST00000465756 CPSF1Q10570 1443 aaKnown RBP14.73□□□□□ -0.05
NPHP3-203ENST00000465756 KIAA0232Q92628 1395 aa14.72□□□□□ -0.05
NPHP3-203ENST00000465756 THRAP3Q9Y2W1 955 aaKnown RBP14.72□□□□□ -0.05
NPHP3-203ENST00000465756 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
NPHP3-203ENST00000465756 ATRNO75882 1429 aa14.71□□□□□ -0.05
NPHP3-203ENST00000465756 CCDC125Q86Z20 511 aa14.71□□□□□ -0.05
NPHP3-203ENST00000465756 TRPM3Q9HCF6 1732 aaPredicted RBP14.71□□□□□ -0.05
NPHP3-203ENST00000465756 SOX12O15370 315 aa14.71□□□□□ -0.05
NPHP3-203ENST00000465756 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
NPHP3-203ENST00000465756 TOM1L2Q6ZVM7 507 aa14.71□□□□□ -0.05
NPHP3-203ENST00000465756 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.06
NPHP3-203ENST00000465756 PDE3BQ13370 1112 aa14.7□□□□□ -0.06
NPHP3-203ENST00000465756 A0A1W2PP64 1363 aa14.7□□□□□ -0.06
NPHP3-203ENST00000465756 NSD2O96028 1365 aa14.7□□□□□ -0.06
NPHP3-203ENST00000465756 ALS2Q96Q42 1657 aa14.7□□□□□ -0.06
NPHP3-203ENST00000465756 SLIT2O94813 1529 aa14.7□□□□□ -0.06
NPHP3-203ENST00000465756 NWD2Q9ULI1 1742 aa14.69□□□□□ -0.06
NPHP3-203ENST00000465756 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
NPHP3-203ENST00000465756 MARF1Q9Y4F3 1742 aaKnown RBP14.69□□□□□ -0.06
NPHP3-203ENST00000465756 FAM83GA6ND36 823 aa14.69□□□□□ -0.06
NPHP3-203ENST00000465756 CCDC7Q96M83 1385 aa14.68□□□□□ -0.06
NPHP3-203ENST00000465756 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
NPHP3-203ENST00000465756 TCP11L2Q8N4U5 519 aa14.68□□□□□ -0.06
NPHP3-203ENST00000465756 NME9Q86XW9 330 aa14.67□□□□□ -0.06
NPHP3-203ENST00000465756 ABCC6O95255 1503 aa14.67□□□□□ -0.06
NPHP3-203ENST00000465756 AKAP12Q02952 1782 aa14.67□□□□□ -0.06
NPHP3-203ENST00000465756 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.66□□□□□ -0.06
NPHP3-203ENST00000465756 RGS17Q9UGC6 210 aaPredicted RBP14.66□□□□□ -0.06
NPHP3-203ENST00000465756 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
NPHP3-203ENST00000465756 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
NPHP3-203ENST00000465756 NLRP2Q9NX02 1062 aa14.65□□□□□ -0.06
NPHP3-203ENST00000465756 RTL1A6NKG5 1358 aa14.65□□□□□ -0.06
NPHP3-203ENST00000465756 ILDR2Q71H61 639 aa14.65□□□□□ -0.06
NPHP3-203ENST00000465756 KRT27Q7Z3Y8 459 aa14.65□□□□□ -0.06
NPHP3-203ENST00000465756 SEPT12Q8IYM1 358 aa14.65□□□□□ -0.06
NPHP3-203ENST00000465756 SPATA31A5Q5VU36 1347 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 SPATA31A7Q8IWB4 1347 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 NSD3Q9BZ95 1437 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 MON2Q7Z3U7 1717 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 SLIT3O75094 1523 aa14.64□□□□□ -0.07
NPHP3-203ENST00000465756 BARGINQ6ZT62 677 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms