RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
SPTA1-203ENST00000465741 MYT1Q01538 1121 aa11.34□□□□□ -0.59
SPTA1-203ENST00000465741 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
SPTA1-203ENST00000465741 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
SPTA1-203ENST00000465741 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
SPTA1-203ENST00000465741 CTDSPL2Q05D32 466 aa11.33□□□□□ -0.6
SPTA1-203ENST00000465741 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
SPTA1-203ENST00000465741 SCUBE3Q8IX30 993 aa11.33□□□□□ -0.6
SPTA1-203ENST00000465741 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
SPTA1-203ENST00000465741 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
SPTA1-203ENST00000465741 USB1Q9BQ65 265 aaKnown RBP11.32□□□□□ -0.6
SPTA1-203ENST00000465741 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
SPTA1-203ENST00000465741 RNF19BQ6ZMZ0 732 aa11.31□□□□□ -0.6
SPTA1-203ENST00000465741 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
SPTA1-203ENST00000465741 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
SPTA1-203ENST00000465741 S1PR4O95977 384 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 PRR20EP86478 221 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 PRR20CP86479 221 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 PRR20DP86480 221 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 PRR20BP86481 221 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 PRR20AP86496 221 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
SPTA1-203ENST00000465741 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
SPTA1-203ENST00000465741 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
SPTA1-203ENST00000465741 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
SPTA1-203ENST00000465741 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
SPTA1-203ENST00000465741 THAP11Q96EK4 314 aa11.28□□□□□ -0.6
SPTA1-203ENST00000465741 GDF9O60383 454 aa11.27□□□□□ -0.61
SPTA1-203ENST00000465741 DGAT1O75907 488 aa11.27□□□□□ -0.61
SPTA1-203ENST00000465741 ABL2P42684 1182 aa11.27□□□□□ -0.61
SPTA1-203ENST00000465741 PLA2G2CQ5R387 149 aa11.27□□□□□ -0.61
SPTA1-203ENST00000465741 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
SPTA1-203ENST00000465741 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
SPTA1-203ENST00000465741 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
SPTA1-203ENST00000465741 PKDCCQ504Y2 493 aa11.26□□□□□ -0.61
SPTA1-203ENST00000465741 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
SPTA1-203ENST00000465741 HMX1Q9NP08 348 aaPredicted RBP11.26□□□□□ -0.61
SPTA1-203ENST00000465741 TBC1D2BQ9UPU7 963 aa11.26□□□□□ -0.61
SPTA1-203ENST00000465741 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
SPTA1-203ENST00000465741 ZNF697Q5TEC3 545 aa11.25□□□□□ -0.61
SPTA1-203ENST00000465741 ZNF330Q9Y3S2 320 aaPredicted RBP11.25□□□□□ -0.61
SPTA1-203ENST00000465741 JUNDP17535 347 aa11.24□□□□□ -0.61
SPTA1-203ENST00000465741 LYPD8Q6UX82 237 aa11.24□□□□□ -0.61
SPTA1-203ENST00000465741 ARXQ96QS3 562 aa11.24□□□□□ -0.61
SPTA1-203ENST00000465741 SPSB2Q99619 263 aa11.24□□□□□ -0.61
SPTA1-203ENST00000465741 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
SPTA1-203ENST00000465741 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
SPTA1-203ENST00000465741 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
SPTA1-203ENST00000465741 HMGXB3Q12766 1538 aa11.21□□□□□ -0.61
SPTA1-203ENST00000465741 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
SPTA1-203ENST00000465741 ADH1BP00325 375 aa11.21□□□□□ -0.61
SPTA1-203ENST00000465741 PTPRNQ16849 979 aa11.21□□□□□ -0.61
SPTA1-203ENST00000465741 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
SPTA1-203ENST00000465741 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
SPTA1-203ENST00000465741 FAM187AA6NFU0 413 aa11.2□□□□□ -0.62
SPTA1-203ENST00000465741 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
SPTA1-203ENST00000465741 ST8SIA5O15466 376 aa11.19□□□□□ -0.62
SPTA1-203ENST00000465741 NR6A1Q15406 480 aa11.19□□□□□ -0.62
SPTA1-203ENST00000465741 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
SPTA1-203ENST00000465741 DXOO77932 396 aaKnown RBP11.17□□□□□ -0.62
SPTA1-203ENST00000465741 MMP16P51512 607 aa11.17□□□□□ -0.62
SPTA1-203ENST00000465741 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
SPTA1-203ENST00000465741 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
SPTA1-203ENST00000465741 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
SPTA1-203ENST00000465741 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
SPTA1-203ENST00000465741 PKD2L1Q9P0L9 805 aa11.16□□□□□ -0.62
SPTA1-203ENST00000465741 F12P00748 615 aaPredicted RBP11.15□□□□□ -0.62
SPTA1-203ENST00000465741 IRF5Q13568 498 aa11.15□□□□□ -0.62
SPTA1-203ENST00000465741 CCDC97Q96F63 343 aaPredicted RBP11.15□□□□□ -0.62
SPTA1-203ENST00000465741 ARID3AQ99856 593 aa11.15□□□□□ -0.62
SPTA1-203ENST00000465741 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
SPTA1-203ENST00000465741 SLC6A16Q9GZN6 736 aa11.15□□□□□ -0.62
SPTA1-203ENST00000465741 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
SPTA1-203ENST00000465741 CTHP32929 405 aa11.14□□□□□ -0.63
SPTA1-203ENST00000465741 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
SPTA1-203ENST00000465741 CCDC82Q8N4S0 544 aa11.14□□□□□ -0.63
SPTA1-203ENST00000465741 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
SPTA1-203ENST00000465741 GPR37L1O60883 481 aa11.12□□□□□ -0.63
SPTA1-203ENST00000465741 ARMC2Q8NEN0 867 aa11.12□□□□□ -0.63
SPTA1-203ENST00000465741 PRDM9Q9NQV7 894 aa11.12□□□□□ -0.63
SPTA1-203ENST00000465741 EVA1BQ9NVM1 165 aa11.12□□□□□ -0.63
SPTA1-203ENST00000465741 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
SPTA1-203ENST00000465741 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
SPTA1-203ENST00000465741 MAP10Q9P2G4 905 aa11.11□□□□□ -0.63
SPTA1-203ENST00000465741 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
SPTA1-203ENST00000465741 CADPSQ9ULU8 1353 aa11.11□□□□□ -0.63
SPTA1-203ENST00000465741 SOX11P35716 441 aa11.1□□□□□ -0.63
SPTA1-203ENST00000465741 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
SPTA1-203ENST00000465741 TREML4Q6UXN2 200 aa11.1□□□□□ -0.63
SPTA1-203ENST00000465741 VAC14Q08AM6 782 aa11.09□□□□□ -0.63
SPTA1-203ENST00000465741 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
SPTA1-203ENST00000465741 GLMNQ92990 594 aa11.09□□□□□ -0.63
SPTA1-203ENST00000465741 POM121CA8CG34 1229 aa11.08□□□□□ -0.64
SPTA1-203ENST00000465741 FOXC1Q12948 553 aa11.08□□□□□ -0.64
SPTA1-203ENST00000465741 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
SPTA1-203ENST00000465741 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
SPTA1-203ENST00000465741 NR1H3Q13133 447 aa11.06□□□□□ -0.64
SPTA1-203ENST00000465741 CRIPAKQ8N1N5 446 aa11.06□□□□□ -0.64
SPTA1-203ENST00000465741 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
SPTA1-203ENST00000465741 TOR4AQ9NXH8 423 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms