RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 EVC2Q86UK5 1308 aa22.14■■□□□ 1.14
SCAP-209ENST00000465628 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.13
SCAP-209ENST00000465628 ATRNO75882 1429 aa22.14■■□□□ 1.13
SCAP-209ENST00000465628 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
SCAP-209ENST00000465628 POLR3AO14802 1390 aaPredicted RBP22.12■■□□□ 1.13
SCAP-209ENST00000465628 BCL9LQ86UU0 1499 aa22.11■■□□□ 1.13
SCAP-209ENST00000465628 NWD2Q9ULI1 1742 aa22.1■■□□□ 1.13
SCAP-209ENST00000465628 SLIT2O94813 1529 aa22.1■■□□□ 1.13
SCAP-209ENST00000465628 UNC5CLQ8IV45 518 aa22.09■■□□□ 1.13
SCAP-209ENST00000465628 CCDC9Q9Y3X0 531 aaKnown RBP22.09■■□□□ 1.13
SCAP-209ENST00000465628 CRYBG1Q9Y4K1 1723 aa22.09■■□□□ 1.13
SCAP-209ENST00000465628 PLEKHG3A1L390 1219 aa22.08■■□□□ 1.13
SCAP-209ENST00000465628 NUTM2GQ5VZR2 741 aa22.08■■□□□ 1.13
SCAP-209ENST00000465628 PHRF1Q9P1Y6 1649 aaKnown RBP22.08■■□□□ 1.13
SCAP-209ENST00000465628 COL14A1Q05707 1796 aaKnown RBP22.07■■□□□ 1.12
SCAP-209ENST00000465628 CABP1Q9NZU7 370 aa22.05■■□□□ 1.12
SCAP-209ENST00000465628 ATAD2Q6PL18 1390 aa22.04■■□□□ 1.12
SCAP-209ENST00000465628 ABTB2Q8N961 1025 aa22.04■■□□□ 1.12
SCAP-209ENST00000465628 GJD4Q96KN9 370 aaPredicted RBP22.04■■□□□ 1.12
SCAP-209ENST00000465628 PRDM11Q9NQV5 511 aa22.04■■□□□ 1.12
SCAP-209ENST00000465628 NRAPQ86VF7 1730 aa22.02■■□□□ 1.12
SCAP-209ENST00000465628 SBNO2Q9Y2G9 1366 aa22.01■■□□□ 1.11
SCAP-209ENST00000465628 GLI3P10071 1580 aa22.01■■□□□ 1.11
SCAP-209ENST00000465628 USP6P35125 1406 aa22.01■■□□□ 1.11
SCAP-209ENST00000465628 FAM83GA6ND36 823 aa22.01■■□□□ 1.11
SCAP-209ENST00000465628 NRKQ7Z2Y5 1582 aa22■■□□□ 1.11
SCAP-209ENST00000465628 A0A0G2JS52 829 aa22■■□□□ 1.11
SCAP-209ENST00000465628 MYT1Q01538 1121 aa22■■□□□ 1.11
SCAP-209ENST00000465628 BTG4Q9NY30 223 aa22■■□□□ 1.11
SCAP-209ENST00000465628 KIAA0232Q92628 1395 aa21.99■■□□□ 1.11
SCAP-209ENST00000465628 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
SCAP-209ENST00000465628 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
SCAP-209ENST00000465628 VPS72Q15906 364 aa21.98■■□□□ 1.11
SCAP-209ENST00000465628 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
SCAP-209ENST00000465628 ZC3H6P61129 1189 aaKnown RBP21.97■■□□□ 1.11
SCAP-209ENST00000465628 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
SCAP-209ENST00000465628 NLRP13Q86W25 1043 aa21.96■■□□□ 1.11
SCAP-209ENST00000465628 TMC1Q8TDI8 760 aa21.96■■□□□ 1.11
SCAP-209ENST00000465628 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
SCAP-209ENST00000465628 ZBTB7CA1YPR0 619 aa21.95■■□□□ 1.1
SCAP-209ENST00000465628 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
SCAP-209ENST00000465628 PIK3C2AO00443 1686 aa21.95■■□□□ 1.1
SCAP-209ENST00000465628 USP19O94966 1318 aa21.93■■□□□ 1.1
SCAP-209ENST00000465628 NLRP6P59044 892 aa21.93■■□□□ 1.1
SCAP-209ENST00000465628 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
SCAP-209ENST00000465628 MON2Q7Z3U7 1717 aa21.92■■□□□ 1.1
SCAP-209ENST00000465628 USP47Q96K76 1375 aa21.92■■□□□ 1.1
SCAP-209ENST00000465628 STRN4Q9NRL3 753 aa21.92■■□□□ 1.1
SCAP-209ENST00000465628 ST20-MTHFSA0A0A6YYL1 179 aa21.91■■□□□ 1.1
SCAP-209ENST00000465628 ZNF692Q9BU19 519 aaPredicted RBP21.91■■□□□ 1.1
SCAP-209ENST00000465628 BRWD3Q6RI45 1802 aa21.91■■□□□ 1.1
SCAP-209ENST00000465628 SEPT12Q8IYM1 358 aa21.9■■□□□ 1.1
SCAP-209ENST00000465628 TTC21BQ7Z4L5 1316 aa21.89■■□□□ 1.1
SCAP-209ENST00000465628 FAM98CQ17RN3 349 aaKnown RBP21.89■■□□□ 1.09
SCAP-209ENST00000465628 GCP02774 474 aa21.88■■□□□ 1.09
SCAP-209ENST00000465628 EVA1CP58658 441 aa21.88■■□□□ 1.09
SCAP-209ENST00000465628 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
SCAP-209ENST00000465628 SSH2Q76I76 1423 aa21.88■■□□□ 1.09
SCAP-209ENST00000465628 CPDO75976 1380 aa21.87■■□□□ 1.09
SCAP-209ENST00000465628 TTC21AQ8NDW8 1320 aa21.87■■□□□ 1.09
SCAP-209ENST00000465628 SLIT3O75094 1523 aa21.87■■□□□ 1.09
SCAP-209ENST00000465628 SOX12O15370 315 aa21.87■■□□□ 1.09
SCAP-209ENST00000465628 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
SCAP-209ENST00000465628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.09
SCAP-209ENST00000465628 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
SCAP-209ENST00000465628 SPATA31A5Q5VU36 1347 aa21.85■■□□□ 1.09
SCAP-209ENST00000465628 SPATA31A7Q8IWB4 1347 aa21.85■■□□□ 1.09
SCAP-209ENST00000465628 SLC24A1O60721 1099 aa21.85■■□□□ 1.09
SCAP-209ENST00000465628 TERF2IPQ9NYB0 399 aa21.85■■□□□ 1.09
SCAP-209ENST00000465628 LMO7Q8WWI1 1683 aa21.85■■□□□ 1.09
SCAP-209ENST00000465628 USP35Q9P2H5 1018 aa21.84■■□□□ 1.09
SCAP-209ENST00000465628 EP400Q96L91 3159 aa21.84■■□□□ 1.09
SCAP-209ENST00000465628 TESK2Q96S53 571 aa21.83■■□□□ 1.09
SCAP-209ENST00000465628 SLC12A5Q9H2X9 1139 aa21.83■■□□□ 1.09
SCAP-209ENST00000465628 CAMTA1Q9Y6Y1 1673 aa21.82■■□□□ 1.08
SCAP-209ENST00000465628 TMF1P82094 1093 aa21.82■■□□□ 1.08
SCAP-209ENST00000465628 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
SCAP-209ENST00000465628 A0A1W2PP64 1363 aa21.82■■□□□ 1.08
SCAP-209ENST00000465628 NINLQ9Y2I6 1382 aa21.82■■□□□ 1.08
SCAP-209ENST00000465628 CD163L1Q9NR16 1453 aa21.82■■□□□ 1.08
SCAP-209ENST00000465628 SPATA31A1Q5TZJ5 1347 aa21.8■■□□□ 1.08
SCAP-209ENST00000465628 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
SCAP-209ENST00000465628 THSD7AQ9UPZ6 1657 aa21.8■■□□□ 1.08
SCAP-209ENST00000465628 COL5A2P05997 1499 aaPredicted RBP21.8■■□□□ 1.08
SCAP-209ENST00000465628 KCNH5Q8NCM2 988 aa21.8■■□□□ 1.08
SCAP-209ENST00000465628 PUS7Q96PZ0 661 aaKnown RBP21.79■■□□□ 1.08
SCAP-209ENST00000465628 LARP1Q6PKG0 1096 aaKnown RBP21.78■■□□□ 1.08
SCAP-209ENST00000465628 AATKQ6ZMQ8 1374 aa21.77■■□□□ 1.08
SCAP-209ENST00000465628 ONECUT3O60422 494 aaPredicted RBP21.77■■□□□ 1.08
SCAP-209ENST00000465628 SF3B2Q13435 895 aaKnown RBP21.77■■□□□ 1.08
SCAP-209ENST00000465628 NME9Q86XW9 330 aa21.77■■□□□ 1.08
SCAP-209ENST00000465628 NFAT5O94916 1531 aa21.76■■□□□ 1.07
SCAP-209ENST00000465628 USP54Q70EL1 1684 aa21.75■■□□□ 1.07
SCAP-209ENST00000465628 BLMP54132 1417 aaPredicted RBP21.75■■□□□ 1.07
SCAP-209ENST00000465628 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
SCAP-209ENST00000465628 CSB-PGBD3P0DP91 1061 aa21.74■■□□□ 1.07
SCAP-209ENST00000465628 CCDC125Q86Z20 511 aa21.74■■□□□ 1.07
SCAP-209ENST00000465628 TCP11L2Q8N4U5 519 aa21.74■■□□□ 1.07
SCAP-209ENST00000465628 ZRANB1Q9UGI0 708 aa21.74■■□□□ 1.07
SCAP-209ENST00000465628 CRB1P82279 1406 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms