RNA–Protein interactions for RNA: ENST00000465366.1

PCNP-203, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 771 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-203ENST00000465366 FOXD4L4Q8WXT5 416 aaPredicted RBP8.81□□□□□ -1
PCNP-203ENST00000465366 ZNF428Q96B54 188 aa8.81□□□□□ -1
PCNP-203ENST00000465366 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
PCNP-203ENST00000465366 WIPF1O43516 503 aa8.8□□□□□ -1
PCNP-203ENST00000465366 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
PCNP-203ENST00000465366 RBM25P49756 843 aaKnown RBP8.8□□□□□ -1
PCNP-203ENST00000465366 GRIPAP1Q4V328 841 aa8.8□□□□□ -1
PCNP-203ENST00000465366 RETREG2Q8NC44 543 aa8.8□□□□□ -1
PCNP-203ENST00000465366 CD46P15529 392 aa8.78□□□□□ -1
PCNP-203ENST00000465366 IRF5Q13568 498 aa8.78□□□□□ -1
PCNP-203ENST00000465366 Q3C1V9 767 aa8.78□□□□□ -1
PCNP-203ENST00000465366 HPS1Q92902 700 aa8.78□□□□□ -1
PCNP-203ENST00000465366 STK17AQ9UEE5 414 aa8.78□□□□□ -1
PCNP-203ENST00000465366 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
PCNP-203ENST00000465366 HLA-CQ95604 372 aa8.77□□□□□ -1.01
PCNP-203ENST00000465366 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
PCNP-203ENST00000465366 MS4A1P11836 297 aa8.76□□□□□ -1.01
PCNP-203ENST00000465366 PCMTD1Q96MG8 357 aaPredicted RBP8.76□□□□□ -1.01
PCNP-203ENST00000465366 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
PCNP-203ENST00000465366 TERTO14746 1132 aaKnown RBP8.75□□□□□ -1.01
PCNP-203ENST00000465366 SKOR1P84550 965 aa8.75□□□□□ -1.01
PCNP-203ENST00000465366 INSM1Q01101 510 aaPredicted RBP8.75□□□□□ -1.01
PCNP-203ENST00000465366 BEGAINQ9BUH8 593 aa8.75□□□□□ -1.01
PCNP-203ENST00000465366 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
PCNP-203ENST00000465366 SENP2Q9HC62 589 aa8.74□□□□□ -1.01
PCNP-203ENST00000465366 E9PSI1 815 aa8.73□□□□□ -1.01
PCNP-203ENST00000465366 KDM4AO75164 1064 aa8.73□□□□□ -1.01
PCNP-203ENST00000465366 HMGB1P09429 215 aaKnown RBP8.73□□□□□ -1.01
PCNP-203ENST00000465366 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
PCNP-203ENST00000465366 NUTM1Q86Y26 1132 aa8.73□□□□□ -1.01
PCNP-203ENST00000465366 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
PCNP-203ENST00000465366 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
PCNP-203ENST00000465366 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
PCNP-203ENST00000465366 HOXA2O43364 376 aa8.69□□□□□ -1.02
PCNP-203ENST00000465366 WNT7BP56706 349 aa8.69□□□□□ -1.02
PCNP-203ENST00000465366 TTBK1Q5TCY1 1321 aaPredicted RBP8.69□□□□□ -1.02
PCNP-203ENST00000465366 ALDH1A1P00352 501 aa8.68□□□□□ -1.02
PCNP-203ENST00000465366 HSP90B1P14625 803 aaKnown RBP8.68□□□□□ -1.02
PCNP-203ENST00000465366 USP46P62068 366 aa8.68□□□□□ -1.02
PCNP-203ENST00000465366 SH3D19Q5HYK7 790 aa8.68□□□□□ -1.02
PCNP-203ENST00000465366 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
PCNP-203ENST00000465366 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
PCNP-203ENST00000465366 JUNDP17535 347 aa8.67□□□□□ -1.02
PCNP-203ENST00000465366 SYMPKQ92797 1274 aaKnown RBP8.67□□□□□ -1.02
PCNP-203ENST00000465366 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
PCNP-203ENST00000465366 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
PCNP-203ENST00000465366 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
PCNP-203ENST00000465366 BMP1P13497 986 aa8.66□□□□□ -1.02
PCNP-203ENST00000465366 PDE4CQ08493 712 aa8.65□□□□□ -1.02
PCNP-203ENST00000465366 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
PCNP-203ENST00000465366 MOXD2PA6NHM9 499 aa8.64□□□□□ -1.03
PCNP-203ENST00000465366 NDUFV2P19404 249 aa8.64□□□□□ -1.03
PCNP-203ENST00000465366 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
PCNP-203ENST00000465366 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
PCNP-203ENST00000465366 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
PCNP-203ENST00000465366 SIAH2O43255 324 aa8.63□□□□□ -1.03
PCNP-203ENST00000465366 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
PCNP-203ENST00000465366 EHBP1Q8NDI1 1231 aa8.63□□□□□ -1.03
PCNP-203ENST00000465366 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
PCNP-203ENST00000465366 CDK11AQ9UQ88 783 aaPredicted RBP8.63□□□□□ -1.03
PCNP-203ENST00000465366 COG6Q9Y2V7 657 aa8.63□□□□□ -1.03
PCNP-203ENST00000465366 FDX1P10109 184 aa8.62□□□□□ -1.03
PCNP-203ENST00000465366 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
PCNP-203ENST00000465366 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
PCNP-203ENST00000465366 SPDYE5A6NIY4 337 aa8.61□□□□□ -1.03
PCNP-203ENST00000465366 GMPRP36959 345 aa8.61□□□□□ -1.03
PCNP-203ENST00000465366 VEGFBP49765 207 aa8.61□□□□□ -1.03
PCNP-203ENST00000465366 KCNA1Q09470 495 aa8.61□□□□□ -1.03
PCNP-203ENST00000465366 MYSM1Q5VVJ2 828 aa8.61□□□□□ -1.03
PCNP-203ENST00000465366 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
PCNP-203ENST00000465366 CAPN5O15484 640 aaPredicted RBP8.6□□□□□ -1.03
PCNP-203ENST00000465366 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
PCNP-203ENST00000465366 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
PCNP-203ENST00000465366 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
PCNP-203ENST00000465366 RETREG3Q86VR2 466 aa8.6□□□□□ -1.03
PCNP-203ENST00000465366 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
PCNP-203ENST00000465366 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
PCNP-203ENST00000465366 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
PCNP-203ENST00000465366 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
PCNP-203ENST00000465366 CSPP1Q1MSJ5 1256 aa8.59□□□□□ -1.03
PCNP-203ENST00000465366 RSBN1LQ6PCB5 846 aaPredicted RBP8.59□□□□□ -1.03
PCNP-203ENST00000465366 C6orf229H3BNL8 230 aa8.58□□□□□ -1.04
PCNP-203ENST00000465366 SH3BP2P78314 561 aa8.58□□□□□ -1.04
PCNP-203ENST00000465366 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
PCNP-203ENST00000465366 SPTLC1O15269 473 aa8.57□□□□□ -1.04
PCNP-203ENST00000465366 BRD1O95696 1058 aa8.57□□□□□ -1.04
PCNP-203ENST00000465366 LIMD1Q9UGP4 676 aa8.57□□□□□ -1.04
PCNP-203ENST00000465366 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
PCNP-203ENST00000465366 CLK2P49760 499 aaKnown RBP8.56□□□□□ -1.04
PCNP-203ENST00000465366 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
PCNP-203ENST00000465366 ERBB4Q15303 1308 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 H3BM21 787 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
PCNP-203ENST00000465366 CCNYL3P0C7X3 344 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 GJA5P36382 358 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 IRF7Q92985 503 aa8.55□□□□□ -1.04
PCNP-203ENST00000465366 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
PCNP-203ENST00000465366 NPAS3Q8IXF0 933 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms