RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
COL11A1-207ENST00000465209 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
COL11A1-207ENST00000465209 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
COL11A1-207ENST00000465209 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
COL11A1-207ENST00000465209 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
COL11A1-207ENST00000465209 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
COL11A1-207ENST00000465209 BTG4Q9NY30 223 aa16.13■□□□□ 0.17
COL11A1-207ENST00000465209 FAM98CQ17RN3 349 aaKnown RBP16.11■□□□□ 0.17
COL11A1-207ENST00000465209 STAC3Q96MF2 364 aa16.11■□□□□ 0.17
COL11A1-207ENST00000465209 KDM2AQ9Y2K7 1162 aa16.11■□□□□ 0.17
COL11A1-207ENST00000465209 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
COL11A1-207ENST00000465209 NRKQ7Z2Y5 1582 aa16.11■□□□□ 0.17
COL11A1-207ENST00000465209 SPATA31A5Q5VU36 1347 aa16.11■□□□□ 0.17
COL11A1-207ENST00000465209 SPATA31A7Q8IWB4 1347 aa16.11■□□□□ 0.17
COL11A1-207ENST00000465209 POLR3AO14802 1390 aaPredicted RBP16.1■□□□□ 0.17
COL11A1-207ENST00000465209 DISP2A7MBM2 1401 aa16.1■□□□□ 0.17
COL11A1-207ENST00000465209 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
COL11A1-207ENST00000465209 HRCP23327 699 aa16.09■□□□□ 0.17
COL11A1-207ENST00000465209 SF3B2Q13435 895 aaKnown RBP16.07■□□□□ 0.16
COL11A1-207ENST00000465209 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
COL11A1-207ENST00000465209 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
COL11A1-207ENST00000465209 KIAA0232Q92628 1395 aa16.07■□□□□ 0.16
COL11A1-207ENST00000465209 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
COL11A1-207ENST00000465209 PRDM11Q9NQV5 511 aa16.05■□□□□ 0.16
COL11A1-207ENST00000465209 BAG6P46379 1132 aa16.04■□□□□ 0.16
COL11A1-207ENST00000465209 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
COL11A1-207ENST00000465209 RREB1Q92766 1687 aa16.04■□□□□ 0.16
COL11A1-207ENST00000465209 CAMTA1Q9Y6Y1 1673 aa16.03■□□□□ 0.16
COL11A1-207ENST00000465209 A0A0G2JS52 829 aa16.03■□□□□ 0.16
COL11A1-207ENST00000465209 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
COL11A1-207ENST00000465209 MYT1Q01538 1121 aa16.03■□□□□ 0.16
COL11A1-207ENST00000465209 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
COL11A1-207ENST00000465209 ACEP12821 1306 aa16.02■□□□□ 0.16
COL11A1-207ENST00000465209 SSH2Q76I76 1423 aa16.02■□□□□ 0.15
COL11A1-207ENST00000465209 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.15
COL11A1-207ENST00000465209 USP19O94966 1318 aa16.01■□□□□ 0.15
COL11A1-207ENST00000465209 PLEKHG3A1L390 1219 aa16.01■□□□□ 0.15
COL11A1-207ENST00000465209 EN1Q05925 392 aaPredicted RBP16.01■□□□□ 0.15
COL11A1-207ENST00000465209 CHRNA2Q15822 529 aa16.01■□□□□ 0.15
COL11A1-207ENST00000465209 CPDO75976 1380 aa16■□□□□ 0.15
COL11A1-207ENST00000465209 NUP188Q5SRE5 1749 aa16■□□□□ 0.15
COL11A1-207ENST00000465209 PARP4Q9UKK3 1724 aaKnown RBP16■□□□□ 0.15
COL11A1-207ENST00000465209 PSDA5PKW4 1024 aaPredicted RBP16■□□□□ 0.15
COL11A1-207ENST00000465209 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
COL11A1-207ENST00000465209 NBPF8Q3BBV2 869 aa15.99■□□□□ 0.15
COL11A1-207ENST00000465209 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
COL11A1-207ENST00000465209 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
COL11A1-207ENST00000465209 PEAK1Q9H792 1746 aa15.97■□□□□ 0.15
COL11A1-207ENST00000465209 PPIP5K1Q6PFW1 1433 aa15.97■□□□□ 0.15
COL11A1-207ENST00000465209 ZC3H6P61129 1189 aaKnown RBP15.97■□□□□ 0.15
COL11A1-207ENST00000465209 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
COL11A1-207ENST00000465209 SLIT3O75094 1523 aa15.97■□□□□ 0.15
COL11A1-207ENST00000465209 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
COL11A1-207ENST00000465209 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
COL11A1-207ENST00000465209 PIK3C2AO00443 1686 aa15.96■□□□□ 0.15
COL11A1-207ENST00000465209 COL18A1P39060 1754 aa15.96■□□□□ 0.15
COL11A1-207ENST00000465209 EZH2Q15910 746 aaKnown RBP15.96■□□□□ 0.15
COL11A1-207ENST00000465209 CAMKK2Q96RR4 588 aa15.96■□□□□ 0.15
COL11A1-207ENST00000465209 STRN4Q9NRL3 753 aa15.96■□□□□ 0.15
COL11A1-207ENST00000465209 LRRC37A3O60309 1634 aa15.94■□□□□ 0.14
COL11A1-207ENST00000465209 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
COL11A1-207ENST00000465209 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
COL11A1-207ENST00000465209 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
COL11A1-207ENST00000465209 PARD3Q8TEW0 1356 aa15.94■□□□□ 0.14
COL11A1-207ENST00000465209 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
COL11A1-207ENST00000465209 USP6P35125 1406 aa15.94■□□□□ 0.14
COL11A1-207ENST00000465209 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
COL11A1-207ENST00000465209 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
COL11A1-207ENST00000465209 BRD4O60885 1362 aaPredicted RBP15.93■□□□□ 0.14
COL11A1-207ENST00000465209 TRIM37O94972 964 aa15.93■□□□□ 0.14
COL11A1-207ENST00000465209 R3HDM1Q15032 1099 aaKnown RBP15.93■□□□□ 0.14
COL11A1-207ENST00000465209 ABTB2Q8N961 1025 aa15.93■□□□□ 0.14
COL11A1-207ENST00000465209 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
COL11A1-207ENST00000465209 AKAP12Q02952 1782 aa15.92■□□□□ 0.14
COL11A1-207ENST00000465209 USP35Q9P2H5 1018 aa15.91■□□□□ 0.14
COL11A1-207ENST00000465209 GCP02774 474 aa15.9■□□□□ 0.14
COL11A1-207ENST00000465209 TCP11L2Q8N4U5 519 aa15.9■□□□□ 0.14
COL11A1-207ENST00000465209 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
COL11A1-207ENST00000465209 CRB1P82279 1406 aa15.89■□□□□ 0.13
COL11A1-207ENST00000465209 THRAP3Q9Y2W1 955 aaKnown RBP15.89■□□□□ 0.13
COL11A1-207ENST00000465209 RGPD5Q99666 1765 aa15.88■□□□□ 0.13
COL11A1-207ENST00000465209 SRPK2P78362 688 aaKnown RBP15.88■□□□□ 0.13
COL11A1-207ENST00000465209 NLRP13Q86W25 1043 aa15.88■□□□□ 0.13
COL11A1-207ENST00000465209 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
COL11A1-207ENST00000465209 APBA3O96018 575 aa15.87■□□□□ 0.13
COL11A1-207ENST00000465209 EVA1CP58658 441 aa15.87■□□□□ 0.13
COL11A1-207ENST00000465209 NFAT5O94916 1531 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 PDE3BQ13370 1112 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 CABP1Q9NZU7 370 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 USP54Q70EL1 1684 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 MON2Q7Z3U7 1717 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 CASZ1Q86V15 1759 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
COL11A1-207ENST00000465209 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
COL11A1-207ENST00000465209 L3MBTL2Q969R5 705 aa15.84■□□□□ 0.13
COL11A1-207ENST00000465209 UTRNP46939 3433 aa15.83■□□□□ 0.12
COL11A1-207ENST00000465209 NLRP6P59044 892 aa15.82■□□□□ 0.12
COL11A1-207ENST00000465209 BCL9O00512 1426 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms