RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 TSPY10P0CW01 314 aa9.07□□□□□ -0.96
SSBP1-204ENST00000465167 CLCN1P35523 988 aa9.07□□□□□ -0.96
SSBP1-204ENST00000465167 PRSS12P56730 875 aa9.07□□□□□ -0.96
SSBP1-204ENST00000465167 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
SSBP1-204ENST00000465167 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
SSBP1-204ENST00000465167 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
SSBP1-204ENST00000465167 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
SSBP1-204ENST00000465167 VPS8Q8N3P4 1428 aa9.06□□□□□ -0.96
SSBP1-204ENST00000465167 KDM5DQ9BY66 1539 aa9.06□□□□□ -0.96
SSBP1-204ENST00000465167 KIF3BO15066 747 aa9.06□□□□□ -0.96
SSBP1-204ENST00000465167 MS4A1P11836 297 aa9.06□□□□□ -0.96
SSBP1-204ENST00000465167 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
SSBP1-204ENST00000465167 GPCPD1Q9NPB8 672 aa9.06□□□□□ -0.96
SSBP1-204ENST00000465167 DHX29Q7Z478 1369 aaKnown RBP9.06□□□□□ -0.96
SSBP1-204ENST00000465167 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
SSBP1-204ENST00000465167 ARHGEF5Q12774 1597 aa9.05□□□□□ -0.96
SSBP1-204ENST00000465167 PLA2R1Q13018 1463 aa9.05□□□□□ -0.96
SSBP1-204ENST00000465167 IQSEC2Q5JU85 1478 aa9.05□□□□□ -0.96
SSBP1-204ENST00000465167 COL9A1P20849 921 aa9.05□□□□□ -0.96
SSBP1-204ENST00000465167 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
SSBP1-204ENST00000465167 PTPRKQ15262 1439 aa9.05□□□□□ -0.96
SSBP1-204ENST00000465167 POLR1AO95602 1720 aaPredicted RBP9.04□□□□□ -0.96
SSBP1-204ENST00000465167 WASHC2CQ9Y4E1 1318 aa9.04□□□□□ -0.96
SSBP1-204ENST00000465167 A2ML1A8K2U0 1454 aa9.03□□□□□ -0.96
SSBP1-204ENST00000465167 LRRC9Q6ZRR7 1453 aa9.03□□□□□ -0.96
SSBP1-204ENST00000465167 PTPREP23469 700 aa9.03□□□□□ -0.96
SSBP1-204ENST00000465167 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
SSBP1-204ENST00000465167 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
SSBP1-204ENST00000465167 ZC3H13Q5T200 1668 aaKnown RBP9.03□□□□□ -0.96
SSBP1-204ENST00000465167 TNRQ92752 1358 aa9.02□□□□□ -0.97
SSBP1-204ENST00000465167 PPP1R3GB7ZBB8 358 aa9.02□□□□□ -0.97
SSBP1-204ENST00000465167 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
SSBP1-204ENST00000465167 PZPP20742 1482 aa9.02□□□□□ -0.97
SSBP1-204ENST00000465167 EIF2AK4Q9P2K8 1649 aaKnown RBP9.02□□□□□ -0.97
SSBP1-204ENST00000465167 MAP3K1Q13233 1512 aa9.01□□□□□ -0.97
SSBP1-204ENST00000465167 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
SSBP1-204ENST00000465167 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
SSBP1-204ENST00000465167 GOPCQ9HD26 462 aa9.01□□□□□ -0.97
SSBP1-204ENST00000465167 MAST1Q9Y2H9 1570 aa9.01□□□□□ -0.97
SSBP1-204ENST00000465167 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
SSBP1-204ENST00000465167 LTBP4Q8N2S1 1624 aa9.01□□□□□ -0.97
SSBP1-204ENST00000465167 MIA2Q96PC5 1412 aa9□□□□□ -0.97
SSBP1-204ENST00000465167 TSKSQ9UJT2 592 aa9□□□□□ -0.97
SSBP1-204ENST00000465167 DISP3Q9P2K9 1392 aa8.99□□□□□ -0.97
SSBP1-204ENST00000465167 MYOM3Q5VTT5 1437 aa8.99□□□□□ -0.97
SSBP1-204ENST00000465167 RNF17Q9BXT8 1623 aaKnown RBP8.99□□□□□ -0.97
SSBP1-204ENST00000465167 LHX8Q68G74 356 aa8.99□□□□□ -0.97
SSBP1-204ENST00000465167 EYA1Q99502 592 aa8.99□□□□□ -0.97
SSBP1-204ENST00000465167 FAM217BQ9NTX9 383 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-204ENST00000465167 TCOF1Q13428 1488 aaKnown RBP8.99□□□□□ -0.97
SSBP1-204ENST00000465167 NLRP1Q9C000 1473 aa8.99□□□□□ -0.97
SSBP1-204ENST00000465167 ZNF335Q9H4Z2 1342 aaPredicted RBP8.99□□□□□ -0.97
SSBP1-204ENST00000465167 LOC105371045A0A1W2PR82 267 aa8.98□□□□□ -0.97
SSBP1-204ENST00000465167 UBAP1LF5GYI3 381 aa8.98□□□□□ -0.97
SSBP1-204ENST00000465167 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
SSBP1-204ENST00000465167 THEMISQ8N1K5 641 aaPredicted RBP8.98□□□□□ -0.97
SSBP1-204ENST00000465167 DUOX2Q9NRD8 1548 aa8.98□□□□□ -0.97
SSBP1-204ENST00000465167 SPATA31D1Q6ZQQ2 1576 aa8.98□□□□□ -0.97
SSBP1-204ENST00000465167 UGGT1Q9NYU2 1555 aa8.98□□□□□ -0.97
SSBP1-204ENST00000465167 CROCC2H7BZ55 1655 aa8.97□□□□□ -0.97
SSBP1-204ENST00000465167 CEP152O94986 1710 aa8.97□□□□□ -0.97
SSBP1-204ENST00000465167 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
SSBP1-204ENST00000465167 PTPN23Q9H3S7 1636 aa8.97□□□□□ -0.97
SSBP1-204ENST00000465167 ABCC3O15438 1527 aa8.96□□□□□ -0.97
SSBP1-204ENST00000465167 CPS1P31327 1500 aa8.96□□□□□ -0.97
SSBP1-204ENST00000465167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.98
SSBP1-204ENST00000465167 RCCD1A6NED2 376 aa8.96□□□□□ -0.98
SSBP1-204ENST00000465167 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
SSBP1-204ENST00000465167 BEGAINQ9BUH8 593 aa8.96□□□□□ -0.98
SSBP1-204ENST00000465167 KANK1Q14678 1352 aa8.96□□□□□ -0.98
SSBP1-204ENST00000465167 CFAP65Q6ZU64 1925 aaKnown RBP8.95□□□□□ -0.98
SSBP1-204ENST00000465167 DEPDC5O75140 1603 aa8.95□□□□□ -0.98
SSBP1-204ENST00000465167 C3orf80F5H4A9 247 aa8.95□□□□□ -0.98
SSBP1-204ENST00000465167 ONECUT3O60422 494 aaPredicted RBP8.95□□□□□ -0.98
SSBP1-204ENST00000465167 SH3D19Q5HYK7 790 aa8.95□□□□□ -0.98
SSBP1-204ENST00000465167 NUDT18Q6ZVK8 323 aa8.95□□□□□ -0.98
SSBP1-204ENST00000465167 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
SSBP1-204ENST00000465167 SHANK2Q9UPX8 1470 aa8.95□□□□□ -0.98
SSBP1-204ENST00000465167 IQGAP1P46940 1657 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 TOM1O60784 492 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 KANK4Q5T7N3 995 aaPredicted RBP8.94□□□□□ -0.98
SSBP1-204ENST00000465167 PACS2Q86VP3 889 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 TATDN2Q93075 761 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.94□□□□□ -0.98
SSBP1-204ENST00000465167 KIF15Q9NS87 1388 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 ERBINQ96RT1 1412 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 ERVK-7P63135 1459 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 NEURL4Q96JN8 1562 aa8.94□□□□□ -0.98
SSBP1-204ENST00000465167 NBPF26B4DH59 902 aa8.93□□□□□ -0.98
SSBP1-204ENST00000465167 PROX2Q3B8N5 592 aa8.93□□□□□ -0.98
SSBP1-204ENST00000465167 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
SSBP1-204ENST00000465167 PNMA3Q9UL41 463 aa8.93□□□□□ -0.98
SSBP1-204ENST00000465167 NPHP4O75161 1426 aaPredicted RBP8.93□□□□□ -0.98
SSBP1-204ENST00000465167 PRDM15P57071 1507 aaPredicted RBP8.92□□□□□ -0.98
SSBP1-204ENST00000465167 ANKRD30AQ9BXX3 1397 aa8.92□□□□□ -0.98
SSBP1-204ENST00000465167 ERBB3P21860 1342 aa8.92□□□□□ -0.98
SSBP1-204ENST00000465167 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
SSBP1-204ENST00000465167 RRP7BPQ9NSQ0 103 aa8.92□□□□□ -0.98
SSBP1-204ENST00000465167 MROH1Q8NDA8 1641 aa8.91□□□□□ -0.98
SSBP1-204ENST00000465167 DAPK1P53355 1430 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms