RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
LIMD1-203ENST00000465039 TTC21AQ8NDW8 1320 aa19.12■□□□□ 0.65
LIMD1-203ENST00000465039 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
LIMD1-203ENST00000465039 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
LIMD1-203ENST00000465039 ANKRD36BQ8N2N9 1353 aa19.11■□□□□ 0.65
LIMD1-203ENST00000465039 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
LIMD1-203ENST00000465039 HDGFL2Q7Z4V5 671 aaPredicted RBP19.11■□□□□ 0.65
LIMD1-203ENST00000465039 MARF1Q9Y4F3 1742 aaKnown RBP19.11■□□□□ 0.65
LIMD1-203ENST00000465039 KTN1Q86UP2 1357 aaKnown RBP19.1■□□□□ 0.65
LIMD1-203ENST00000465039 MYOM1P52179 1685 aa19.1■□□□□ 0.65
LIMD1-203ENST00000465039 USP54Q70EL1 1684 aa19.1■□□□□ 0.65
LIMD1-203ENST00000465039 A0A1W2PP64 1363 aa19.08■□□□□ 0.65
LIMD1-203ENST00000465039 USP19O94966 1318 aa19.07■□□□□ 0.64
LIMD1-203ENST00000465039 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
LIMD1-203ENST00000465039 PIK3C2AO00443 1686 aa19.07■□□□□ 0.64
LIMD1-203ENST00000465039 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
LIMD1-203ENST00000465039 SLC12A5Q9H2X9 1139 aa19.06■□□□□ 0.64
LIMD1-203ENST00000465039 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
LIMD1-203ENST00000465039 TTC21BQ7Z4L5 1316 aa19.05■□□□□ 0.64
LIMD1-203ENST00000465039 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
LIMD1-203ENST00000465039 SLIT3O75094 1523 aa19.05■□□□□ 0.64
LIMD1-203ENST00000465039 MEX3CQ5U5Q3 659 aaKnown RBP19.04■□□□□ 0.64
LIMD1-203ENST00000465039 ABTB2Q8N961 1025 aa19.04■□□□□ 0.64
LIMD1-203ENST00000465039 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
LIMD1-203ENST00000465039 LMOD2Q6P5Q4 547 aa19.03■□□□□ 0.64
LIMD1-203ENST00000465039 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
LIMD1-203ENST00000465039 NUTM2BA6NNL0 878 aaPredicted RBP19.02■□□□□ 0.64
LIMD1-203ENST00000465039 NUTM2EB1AL46 878 aaPredicted RBP19.02■□□□□ 0.64
LIMD1-203ENST00000465039 NUTM2AQ8IVF1 878 aaPredicted RBP19.02■□□□□ 0.64
LIMD1-203ENST00000465039 CPDO75976 1380 aa19.02■□□□□ 0.64
LIMD1-203ENST00000465039 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.01■□□□□ 0.63
LIMD1-203ENST00000465039 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
LIMD1-203ENST00000465039 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
LIMD1-203ENST00000465039 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
LIMD1-203ENST00000465039 FNBP4Q8N3X1 1017 aaPredicted RBP19■□□□□ 0.63
LIMD1-203ENST00000465039 COL14A1Q05707 1796 aaKnown RBP19■□□□□ 0.63
LIMD1-203ENST00000465039 ABCC6O95255 1503 aa19■□□□□ 0.63
LIMD1-203ENST00000465039 SLIT2O94813 1529 aa18.99■□□□□ 0.63
LIMD1-203ENST00000465039 NLRP6P59044 892 aa18.98■□□□□ 0.63
LIMD1-203ENST00000465039 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
LIMD1-203ENST00000465039 OVOS2A0A0J9YW53 1432 aa18.98■□□□□ 0.63
LIMD1-203ENST00000465039 OVOS2Q6IE36 1432 aa18.98■□□□□ 0.63
LIMD1-203ENST00000465039 ADAMTS2O95450 1211 aa18.97■□□□□ 0.63
LIMD1-203ENST00000465039 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
LIMD1-203ENST00000465039 PLCH1Q4KWH8 1693 aa18.96■□□□□ 0.63
LIMD1-203ENST00000465039 CABLES1Q8TDN4 633 aa18.96■□□□□ 0.63
LIMD1-203ENST00000465039 NGLY1Q96IV0 654 aa18.96■□□□□ 0.63
LIMD1-203ENST00000465039 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
LIMD1-203ENST00000465039 AFF2P51816 1311 aa18.96■□□□□ 0.63
LIMD1-203ENST00000465039 NFAT5O94916 1531 aa18.95■□□□□ 0.62
LIMD1-203ENST00000465039 CCDC7Q96M83 1385 aa18.94■□□□□ 0.62
LIMD1-203ENST00000465039 GCP02774 474 aa18.94■□□□□ 0.62
LIMD1-203ENST00000465039 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
LIMD1-203ENST00000465039 BCL9LQ86UU0 1499 aa18.93■□□□□ 0.62
LIMD1-203ENST00000465039 C11orf95C9JLR9 678 aaPredicted RBP18.93■□□□□ 0.62
LIMD1-203ENST00000465039 RGS17Q9UGC6 210 aaPredicted RBP18.93■□□□□ 0.62
LIMD1-203ENST00000465039 NSD2O96028 1365 aa18.93■□□□□ 0.62
LIMD1-203ENST00000465039 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
LIMD1-203ENST00000465039 NSD3Q9BZ95 1437 aa18.92■□□□□ 0.62
LIMD1-203ENST00000465039 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
LIMD1-203ENST00000465039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
LIMD1-203ENST00000465039 PRDM11Q9NQV5 511 aa18.92■□□□□ 0.62
LIMD1-203ENST00000465039 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
LIMD1-203ENST00000465039 NRAPQ86VF7 1730 aa18.91■□□□□ 0.62
LIMD1-203ENST00000465039 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
LIMD1-203ENST00000465039 NME9Q86XW9 330 aa18.91■□□□□ 0.62
LIMD1-203ENST00000465039 AATKQ6ZMQ8 1374 aa18.91■□□□□ 0.62
LIMD1-203ENST00000465039 ATRNO75882 1429 aa18.91■□□□□ 0.62
LIMD1-203ENST00000465039 NUTM2GQ5VZR2 741 aa18.9■□□□□ 0.62
LIMD1-203ENST00000465039 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
LIMD1-203ENST00000465039 USP21Q9UK80 565 aa18.9■□□□□ 0.62
LIMD1-203ENST00000465039 FAM83GA6ND36 823 aa18.89■□□□□ 0.61
LIMD1-203ENST00000465039 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.61
LIMD1-203ENST00000465039 COG3Q96JB2 828 aa18.89■□□□□ 0.61
LIMD1-203ENST00000465039 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
LIMD1-203ENST00000465039 WASHC2AQ641Q2 1341 aa18.89■□□□□ 0.61
LIMD1-203ENST00000465039 ANKRD26Q9UPS8 1709 aa18.88■□□□□ 0.61
LIMD1-203ENST00000465039 FYB1O15117 783 aa18.88■□□□□ 0.61
LIMD1-203ENST00000465039 ARHGEF25Q86VW2 580 aa18.87■□□□□ 0.61
LIMD1-203ENST00000465039 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
LIMD1-203ENST00000465039 KIF24Q5T7B8 1368 aa18.86■□□□□ 0.61
LIMD1-203ENST00000465039 PANK3Q9H999 370 aa18.86■□□□□ 0.61
LIMD1-203ENST00000465039 COL18A1P39060 1754 aa18.86■□□□□ 0.61
LIMD1-203ENST00000465039 VPS72Q15906 364 aa18.85■□□□□ 0.61
LIMD1-203ENST00000465039 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
LIMD1-203ENST00000465039 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
LIMD1-203ENST00000465039 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
LIMD1-203ENST00000465039 RBM6P78332 1123 aaKnown RBP18.84■□□□□ 0.61
LIMD1-203ENST00000465039 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
LIMD1-203ENST00000465039 LTN1O94822 1766 aa18.83■□□□□ 0.61
LIMD1-203ENST00000465039 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
LIMD1-203ENST00000465039 QTRT2Q9H974 415 aaKnown RBP18.83■□□□□ 0.6
LIMD1-203ENST00000465039 BTG4Q9NY30 223 aa18.83■□□□□ 0.6
LIMD1-203ENST00000465039 COL5A2P05997 1499 aaPredicted RBP18.83■□□□□ 0.6
LIMD1-203ENST00000465039 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.6
LIMD1-203ENST00000465039 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
LIMD1-203ENST00000465039 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
LIMD1-203ENST00000465039 RXRBP28702 533 aa18.81■□□□□ 0.6
LIMD1-203ENST00000465039 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
LIMD1-203ENST00000465039 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms