RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 TOPAZ1Q8N9V7 1692 aa28.16■■■□□ 2.1
MCF2L2-206ENST00000464626 NBPF1Q3BBV0 1214 aa28.16■■■□□ 2.1
MCF2L2-206ENST00000464626 SEPT12Q8IYM1 358 aa28.15■■■□□ 2.1
MCF2L2-206ENST00000464626 POLR3AO14802 1390 aaPredicted RBP28.14■■■□□ 2.1
MCF2L2-206ENST00000464626 PAK3O75914 559 aaPredicted RBP28.13■■■□□ 2.09
MCF2L2-206ENST00000464626 CCDC61Q9Y6R9 512 aa28.13■■■□□ 2.09
MCF2L2-206ENST00000464626 BTG4Q9NY30 223 aa28.12■■■□□ 2.09
MCF2L2-206ENST00000464626 CCDC9Q9Y3X0 531 aaKnown RBP28.12■■■□□ 2.09
MCF2L2-206ENST00000464626 BLMP54132 1417 aaPredicted RBP28.11■■■□□ 2.09
MCF2L2-206ENST00000464626 PLEKHG3A1L390 1219 aa28.11■■■□□ 2.09
MCF2L2-206ENST00000464626 ACEP12821 1306 aa28.08■■■□□ 2.09
MCF2L2-206ENST00000464626 NBPF8Q3BBV2 869 aa28.07■■■□□ 2.08
MCF2L2-206ENST00000464626 CENPJQ9HC77 1338 aaPredicted RBP28.07■■■□□ 2.08
MCF2L2-206ENST00000464626 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
MCF2L2-206ENST00000464626 PHRF1Q9P1Y6 1649 aaKnown RBP28.06■■■□□ 2.08
MCF2L2-206ENST00000464626 L3MBTL2Q969R5 705 aa28.05■■■□□ 2.08
MCF2L2-206ENST00000464626 PRDM11Q9NQV5 511 aa28.05■■■□□ 2.08
MCF2L2-206ENST00000464626 ZRANB1Q9UGI0 708 aa28.04■■■□□ 2.08
MCF2L2-206ENST00000464626 SPATA31A5Q5VU36 1347 aa28.03■■■□□ 2.08
MCF2L2-206ENST00000464626 SPATA31A7Q8IWB4 1347 aa28.03■■■□□ 2.08
MCF2L2-206ENST00000464626 QRICH2Q9H0J4 1663 aa28.02■■■□□ 2.08
MCF2L2-206ENST00000464626 KIAA0232Q92628 1395 aa28.01■■■□□ 2.07
MCF2L2-206ENST00000464626 FAM98CQ17RN3 349 aaKnown RBP28.01■■■□□ 2.07
MCF2L2-206ENST00000464626 SRCAPQ6ZRS2 3230 aa27.99■■■□□ 2.07
MCF2L2-206ENST00000464626 SRPK2P78362 688 aaKnown RBP27.99■■■□□ 2.07
MCF2L2-206ENST00000464626 PPIP5K1Q6PFW1 1433 aa27.99■■■□□ 2.07
MCF2L2-206ENST00000464626 BRD4O60885 1362 aaPredicted RBP27.99■■■□□ 2.07
MCF2L2-206ENST00000464626 TRPM1Q7Z4N2 1603 aa27.98■■■□□ 2.07
MCF2L2-206ENST00000464626 THSD7AQ9UPZ6 1657 aa27.97■■■□□ 2.07
MCF2L2-206ENST00000464626 SF3B2Q13435 895 aaKnown RBP27.97■■■□□ 2.07
MCF2L2-206ENST00000464626 SIN3AQ96ST3 1273 aa27.97■■■□□ 2.07
MCF2L2-206ENST00000464626 A0A0G2JS52 829 aa27.96■■■□□ 2.07
MCF2L2-206ENST00000464626 MYT1Q01538 1121 aa27.96■■■□□ 2.07
MCF2L2-206ENST00000464626 ABTB2Q8N961 1025 aa27.96■■■□□ 2.07
MCF2L2-206ENST00000464626 CABP2Q9NPB3 220 aa27.96■■■□□ 2.07
MCF2L2-206ENST00000464626 USP19O94966 1318 aa27.95■■■□□ 2.07
MCF2L2-206ENST00000464626 NRKQ7Z2Y5 1582 aa27.95■■■□□ 2.07
MCF2L2-206ENST00000464626 NUTM2GQ5VZR2 741 aa27.95■■■□□ 2.06
MCF2L2-206ENST00000464626 ZC3H6P61129 1189 aaKnown RBP27.94■■■□□ 2.06
MCF2L2-206ENST00000464626 CHRNA2Q15822 529 aa27.94■■■□□ 2.06
MCF2L2-206ENST00000464626 DEFB132Q7Z7B7 95 aa27.94■■■□□ 2.06
MCF2L2-206ENST00000464626 CPDO75976 1380 aa27.94■■■□□ 2.06
MCF2L2-206ENST00000464626 SPATA31A1Q5TZJ5 1347 aa27.93■■■□□ 2.06
MCF2L2-206ENST00000464626 NLRP13Q86W25 1043 aa27.91■■■□□ 2.06
MCF2L2-206ENST00000464626 CABP1Q9NZU7 370 aa27.89■■■□□ 2.06
MCF2L2-206ENST00000464626 EVC2Q86UK5 1308 aa27.89■■■□□ 2.05
MCF2L2-206ENST00000464626 LMO7Q8WWI1 1683 aa27.88■■■□□ 2.05
MCF2L2-206ENST00000464626 USP6P35125 1406 aa27.88■■■□□ 2.05
MCF2L2-206ENST00000464626 NEUROD1Q13562 356 aa27.88■■■□□ 2.05
MCF2L2-206ENST00000464626 ROCK2O75116 1388 aaKnown RBP27.87■■■□□ 2.05
MCF2L2-206ENST00000464626 SSH2Q76I76 1423 aa27.87■■■□□ 2.05
MCF2L2-206ENST00000464626 STRN4Q9NRL3 753 aa27.87■■■□□ 2.05
MCF2L2-206ENST00000464626 CAMTA1Q9Y6Y1 1673 aa27.87■■■□□ 2.05
MCF2L2-206ENST00000464626 RGPD1P0DJD0 1748 aa27.87■■■□□ 2.05
MCF2L2-206ENST00000464626 GCP02774 474 aa27.85■■■□□ 2.05
MCF2L2-206ENST00000464626 BAG6P46379 1132 aa27.85■■■□□ 2.05
MCF2L2-206ENST00000464626 EVA1CP58658 441 aa27.84■■■□□ 2.05
MCF2L2-206ENST00000464626 BARGINQ6ZT62 677 aa27.84■■■□□ 2.05
MCF2L2-206ENST00000464626 SLIT3O75094 1523 aa27.82■■■□□ 2.04
MCF2L2-206ENST00000464626 FAM182BQ5T319 152 aa27.8■■■□□ 2.04
MCF2L2-206ENST00000464626 DISP2A7MBM2 1401 aa27.8■■■□□ 2.04
MCF2L2-206ENST00000464626 LARP1Q6PKG0 1096 aaKnown RBP27.79■■■□□ 2.04
MCF2L2-206ENST00000464626 NLRP6P59044 892 aa27.78■■■□□ 2.04
MCF2L2-206ENST00000464626 ZNF692Q9BU19 519 aaPredicted RBP27.78■■■□□ 2.04
MCF2L2-206ENST00000464626 TNS1Q9HBL0 1735 aaKnown RBP27.78■■■□□ 2.04
MCF2L2-206ENST00000464626 PIK3C2AO00443 1686 aa27.78■■■□□ 2.04
MCF2L2-206ENST00000464626 COL5A2P05997 1499 aaPredicted RBP27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 SBNO2Q9Y2G9 1366 aa27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 FAM196AQ6ZSG2 479 aa27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 TCP11L2Q8N4U5 519 aa27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 USP35Q9P2H5 1018 aa27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 THRAP3Q9Y2W1 955 aaKnown RBP27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 AKAP12Q02952 1782 aa27.77■■■□□ 2.04
MCF2L2-206ENST00000464626 AATKQ6ZMQ8 1374 aa27.75■■■□□ 2.03
MCF2L2-206ENST00000464626 EN1Q05925 392 aaPredicted RBP27.73■■■□□ 2.03
MCF2L2-206ENST00000464626 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
MCF2L2-206ENST00000464626 TTC21BQ7Z4L5 1316 aa27.72■■■□□ 2.03
MCF2L2-206ENST00000464626 COL18A1P39060 1754 aa27.71■■■□□ 2.03
MCF2L2-206ENST00000464626 CRB1P82279 1406 aa27.71■■■□□ 2.03
MCF2L2-206ENST00000464626 PDE3BQ13370 1112 aa27.71■■■□□ 2.03
MCF2L2-206ENST00000464626 PARP4Q9UKK3 1724 aaKnown RBP27.71■■■□□ 2.03
MCF2L2-206ENST00000464626 TTC21AQ8NDW8 1320 aa27.7■■■□□ 2.03
MCF2L2-206ENST00000464626 LRP5O75197 1615 aa27.68■■■□□ 2.02
MCF2L2-206ENST00000464626 TRIM37O94972 964 aa27.68■■■□□ 2.02
MCF2L2-206ENST00000464626 KCNH5Q8NCM2 988 aa27.67■■■□□ 2.02
MCF2L2-206ENST00000464626 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
MCF2L2-206ENST00000464626 PARD3Q8TEW0 1356 aa27.66■■■□□ 2.02
MCF2L2-206ENST00000464626 MON2Q7Z3U7 1717 aa27.66■■■□□ 2.02
MCF2L2-206ENST00000464626 KTN1Q86UP2 1357 aaKnown RBP27.65■■■□□ 2.02
MCF2L2-206ENST00000464626 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
MCF2L2-206ENST00000464626 ARHGEF25Q86VW2 580 aa27.65■■■□□ 2.02
MCF2L2-206ENST00000464626 CAMKK2Q96RR4 588 aa27.65■■■□□ 2.02
MCF2L2-206ENST00000464626 ZBTB7CA1YPR0 619 aa27.64■■■□□ 2.02
MCF2L2-206ENST00000464626 C11orf95C9JLR9 678 aaPredicted RBP27.64■■■□□ 2.02
MCF2L2-206ENST00000464626 EZH2Q15910 746 aaKnown RBP27.63■■■□□ 2.01
MCF2L2-206ENST00000464626 PSDA5PKW4 1024 aaPredicted RBP27.62■■■□□ 2.01
MCF2L2-206ENST00000464626 AXIN2Q9Y2T1 843 aa27.62■■■□□ 2.01
MCF2L2-206ENST00000464626 WDR17Q8IZU2 1322 aa27.62■■■□□ 2.01
MCF2L2-206ENST00000464626 APBA3O96018 575 aa27.61■■■□□ 2.01
MCF2L2-206ENST00000464626 NFAT5O94916 1531 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms