RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 HDGFL2Q7Z4V5 671 aaPredicted RBP11.52□□□□□ -0.57
PLD3-208ENST00000464586 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
PLD3-208ENST00000464586 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.57
PLD3-208ENST00000464586 USP6P35125 1406 aa11.52□□□□□ -0.57
PLD3-208ENST00000464586 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
PLD3-208ENST00000464586 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
PLD3-208ENST00000464586 MYOM1P52179 1685 aa11.51□□□□□ -0.57
PLD3-208ENST00000464586 CPSF1Q10570 1443 aaKnown RBP11.51□□□□□ -0.57
PLD3-208ENST00000464586 NRKQ7Z2Y5 1582 aa11.5□□□□□ -0.57
PLD3-208ENST00000464586 LRP6O75581 1613 aa11.5□□□□□ -0.57
PLD3-208ENST00000464586 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
PLD3-208ENST00000464586 PHF23Q9BUL5 403 aaPredicted RBP11.5□□□□□ -0.57
PLD3-208ENST00000464586 SLC12A5Q9H2X9 1139 aa11.5□□□□□ -0.57
PLD3-208ENST00000464586 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
PLD3-208ENST00000464586 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
PLD3-208ENST00000464586 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
PLD3-208ENST00000464586 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
PLD3-208ENST00000464586 TTC21AQ8NDW8 1320 aa11.48□□□□□ -0.57
PLD3-208ENST00000464586 SSH2Q76I76 1423 aa11.48□□□□□ -0.57
PLD3-208ENST00000464586 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
PLD3-208ENST00000464586 PIK3C2AO00443 1686 aa11.48□□□□□ -0.57
PLD3-208ENST00000464586 KIF20BQ96Q89 1820 aa11.47□□□□□ -0.57
PLD3-208ENST00000464586 TTC21BQ7Z4L5 1316 aa11.47□□□□□ -0.57
PLD3-208ENST00000464586 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
PLD3-208ENST00000464586 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
PLD3-208ENST00000464586 POLR3GLQ9BT43 218 aa11.47□□□□□ -0.57
PLD3-208ENST00000464586 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
PLD3-208ENST00000464586 EDC4Q6P2E9 1401 aaKnown RBP11.46□□□□□ -0.57
PLD3-208ENST00000464586 A0A1W2PP64 1363 aa11.46□□□□□ -0.57
PLD3-208ENST00000464586 ANKRD36BQ8N2N9 1353 aa11.46□□□□□ -0.57
PLD3-208ENST00000464586 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
PLD3-208ENST00000464586 CABLES1Q8TDN4 633 aa11.46□□□□□ -0.57
PLD3-208ENST00000464586 NWD2Q9ULI1 1742 aa11.46□□□□□ -0.58
PLD3-208ENST00000464586 NUTM2GQ5VZR2 741 aa11.45□□□□□ -0.58
PLD3-208ENST00000464586 NGLY1Q96IV0 654 aa11.45□□□□□ -0.58
PLD3-208ENST00000464586 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
PLD3-208ENST00000464586 PLCH1Q4KWH8 1693 aa11.45□□□□□ -0.58
PLD3-208ENST00000464586 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.44□□□□□ -0.58
PLD3-208ENST00000464586 NLRP6P59044 892 aa11.44□□□□□ -0.58
PLD3-208ENST00000464586 C8orf37Q96NL8 207 aa11.44□□□□□ -0.58
PLD3-208ENST00000464586 ZNF772Q68DY9 489 aaPredicted RBP11.43□□□□□ -0.58
PLD3-208ENST00000464586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.58
PLD3-208ENST00000464586 USP19O94966 1318 aa11.42□□□□□ -0.58
PLD3-208ENST00000464586 AFF2P51816 1311 aa11.42□□□□□ -0.58
PLD3-208ENST00000464586 SLIT3O75094 1523 aa11.42□□□□□ -0.58
PLD3-208ENST00000464586 USP31Q70CQ4 1352 aa11.41□□□□□ -0.58
PLD3-208ENST00000464586 LTN1O94822 1766 aa11.41□□□□□ -0.58
PLD3-208ENST00000464586 ANKRD26Q9UPS8 1709 aa11.41□□□□□ -0.58
PLD3-208ENST00000464586 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
PLD3-208ENST00000464586 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
PLD3-208ENST00000464586 RGPD5Q99666 1765 aa11.41□□□□□ -0.58
PLD3-208ENST00000464586 GCP02774 474 aa11.4□□□□□ -0.58
PLD3-208ENST00000464586 NME9Q86XW9 330 aa11.4□□□□□ -0.58
PLD3-208ENST00000464586 FNBP4Q8N3X1 1017 aaPredicted RBP11.4□□□□□ -0.58
PLD3-208ENST00000464586 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.58
PLD3-208ENST00000464586 USP21Q9UK80 565 aa11.4□□□□□ -0.58
PLD3-208ENST00000464586 NRAPQ86VF7 1730 aa11.4□□□□□ -0.58
PLD3-208ENST00000464586 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
PLD3-208ENST00000464586 ZC3H6P61129 1189 aaKnown RBP11.39□□□□□ -0.59
PLD3-208ENST00000464586 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
PLD3-208ENST00000464586 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
PLD3-208ENST00000464586 SLIT2O94813 1529 aa11.39□□□□□ -0.59
PLD3-208ENST00000464586 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
PLD3-208ENST00000464586 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
PLD3-208ENST00000464586 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
PLD3-208ENST00000464586 COG3Q96JB2 828 aa11.38□□□□□ -0.59
PLD3-208ENST00000464586 COL18A1P39060 1754 aa11.38□□□□□ -0.59
PLD3-208ENST00000464586 CPDO75976 1380 aa11.38□□□□□ -0.59
PLD3-208ENST00000464586 KIAA0232Q92628 1395 aa11.38□□□□□ -0.59
PLD3-208ENST00000464586 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
PLD3-208ENST00000464586 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
PLD3-208ENST00000464586 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
PLD3-208ENST00000464586 CARD14Q9BXL6 1004 aa11.37□□□□□ -0.59
PLD3-208ENST00000464586 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
PLD3-208ENST00000464586 PANK3Q9H999 370 aa11.37□□□□□ -0.59
PLD3-208ENST00000464586 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
PLD3-208ENST00000464586 TRPC5Q9UL62 973 aaPredicted RBP11.37□□□□□ -0.59
PLD3-208ENST00000464586 NFAT5O94916 1531 aa11.36□□□□□ -0.59
PLD3-208ENST00000464586 FYB1O15117 783 aa11.36□□□□□ -0.59
PLD3-208ENST00000464586 POTEAQ6S8J7 498 aa11.36□□□□□ -0.59
PLD3-208ENST00000464586 UNC5CLQ8IV45 518 aa11.36□□□□□ -0.59
PLD3-208ENST00000464586 BTG4Q9NY30 223 aa11.36□□□□□ -0.59
PLD3-208ENST00000464586 BCL9LQ86UU0 1499 aa11.36□□□□□ -0.59
PLD3-208ENST00000464586 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 ATRNO75882 1429 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 SOX12O15370 315 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 CHRNA2Q15822 529 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 ABCC6O95255 1503 aa11.35□□□□□ -0.59
PLD3-208ENST00000464586 RXRBP28702 533 aa11.34□□□□□ -0.59
PLD3-208ENST00000464586 RBM6P78332 1123 aaKnown RBP11.34□□□□□ -0.59
PLD3-208ENST00000464586 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
PLD3-208ENST00000464586 KNSTRNQ9Y448 316 aa11.34□□□□□ -0.59
PLD3-208ENST00000464586 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
PLD3-208ENST00000464586 AATKQ6ZMQ8 1374 aa11.33□□□□□ -0.6
PLD3-208ENST00000464586 EVA1CP58658 441 aa11.33□□□□□ -0.6
PLD3-208ENST00000464586 VPS72Q15906 364 aa11.33□□□□□ -0.6
PLD3-208ENST00000464586 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms