RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
CLK1-208ENST00000464454 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
CLK1-208ENST00000464454 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
CLK1-208ENST00000464454 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
CLK1-208ENST00000464454 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.05
CLK1-208ENST00000464454 WNT7BP56706 349 aa8.51□□□□□ -1.05
CLK1-208ENST00000464454 SPRYD7Q5W111 196 aa8.51□□□□□ -1.05
CLK1-208ENST00000464454 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
CLK1-208ENST00000464454 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
CLK1-208ENST00000464454 EMID1Q96A84 441 aaPredicted RBP8.5□□□□□ -1.05
CLK1-208ENST00000464454 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
CLK1-208ENST00000464454 BAP1Q92560 729 aa8.49□□□□□ -1.05
CLK1-208ENST00000464454 GFRA3O60609 400 aa8.48□□□□□ -1.05
CLK1-208ENST00000464454 UBTFP17480 764 aaKnown RBP8.48□□□□□ -1.05
CLK1-208ENST00000464454 ZNF697Q5TEC3 545 aa8.48□□□□□ -1.05
CLK1-208ENST00000464454 EPS8L1Q8TE68 723 aa8.48□□□□□ -1.05
CLK1-208ENST00000464454 NRG2O14511 850 aaPredicted RBP8.47□□□□□ -1.05
CLK1-208ENST00000464454 RAD21O60216 631 aa8.47□□□□□ -1.05
CLK1-208ENST00000464454 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
CLK1-208ENST00000464454 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
CLK1-208ENST00000464454 TRAF7Q6Q0C0 670 aa8.47□□□□□ -1.05
CLK1-208ENST00000464454 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
CLK1-208ENST00000464454 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
CLK1-208ENST00000464454 GPSM3Q9Y4H4 160 aa8.47□□□□□ -1.05
CLK1-208ENST00000464454 SH3BP2P78314 561 aa8.46□□□□□ -1.06
CLK1-208ENST00000464454 PTK2Q05397 1052 aa8.45□□□□□ -1.06
CLK1-208ENST00000464454 AGERQ15109 404 aa8.45□□□□□ -1.06
CLK1-208ENST00000464454 WWC1Q8IX03 1113 aa8.45□□□□□ -1.06
CLK1-208ENST00000464454 WNT7AO00755 349 aa8.44□□□□□ -1.06
CLK1-208ENST00000464454 SKOR1P84550 965 aa8.44□□□□□ -1.06
CLK1-208ENST00000464454 EHBP1Q8NDI1 1231 aa8.44□□□□□ -1.06
CLK1-208ENST00000464454 TBC1D2BQ9UPU7 963 aa8.44□□□□□ -1.06
CLK1-208ENST00000464454 VARSP26640 1264 aaKnown RBP8.43□□□□□ -1.06
CLK1-208ENST00000464454 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
CLK1-208ENST00000464454 SH3BP5LQ7L8J4 393 aa8.43□□□□□ -1.06
CLK1-208ENST00000464454 ARHGAP9Q9BRR9 750 aa8.43□□□□□ -1.06
CLK1-208ENST00000464454 COG6Q9Y2V7 657 aa8.43□□□□□ -1.06
CLK1-208ENST00000464454 SH3RF1Q7Z6J0 888 aa8.42□□□□□ -1.06
CLK1-208ENST00000464454 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
CLK1-208ENST00000464454 GDPD2Q9HCC8 539 aa8.42□□□□□ -1.06
CLK1-208ENST00000464454 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
CLK1-208ENST00000464454 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 ABL2P42684 1182 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 PRR20EP86478 221 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 PRR20CP86479 221 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 PRR20DP86480 221 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 PRR20BP86481 221 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 PRR20AP86496 221 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 FOXJ1Q92949 421 aa8.41□□□□□ -1.06
CLK1-208ENST00000464454 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
CLK1-208ENST00000464454 FOXC1Q12948 553 aa8.4□□□□□ -1.06
CLK1-208ENST00000464454 WASHC4Q2M389 1173 aa8.4□□□□□ -1.06
CLK1-208ENST00000464454 ZBTB33Q86T24 672 aa8.4□□□□□ -1.06
CLK1-208ENST00000464454 GDF9O60383 454 aa8.39□□□□□ -1.07
CLK1-208ENST00000464454 GPR37L1O60883 481 aa8.39□□□□□ -1.07
CLK1-208ENST00000464454 NR1H3Q13133 447 aa8.39□□□□□ -1.07
CLK1-208ENST00000464454 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
CLK1-208ENST00000464454 CARD14Q9BXL6 1004 aa8.39□□□□□ -1.07
CLK1-208ENST00000464454 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
CLK1-208ENST00000464454 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
CLK1-208ENST00000464454 MPNDQ8N594 471 aa8.38□□□□□ -1.07
CLK1-208ENST00000464454 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
CLK1-208ENST00000464454 CDV3Q9UKY7 258 aaKnown RBP8.38□□□□□ -1.07
CLK1-208ENST00000464454 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
CLK1-208ENST00000464454 A6NJR5 290 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 FBXO45P0C2W1 286 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
CLK1-208ENST00000464454 C4orf48Q5BLP8 95 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 CYP4X1Q8N118 509 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 SNIP1Q8TAD8 396 aaKnown RBP8.37□□□□□ -1.07
CLK1-208ENST00000464454 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 PDZRN3Q9UPQ7 1066 aa8.37□□□□□ -1.07
CLK1-208ENST00000464454 TNFRSF10AO00220 468 aa8.36□□□□□ -1.07
CLK1-208ENST00000464454 IRF5Q13568 498 aa8.36□□□□□ -1.07
CLK1-208ENST00000464454 ERFEQ4G0M1 354 aa8.36□□□□□ -1.07
CLK1-208ENST00000464454 PROSER2Q86WR7 435 aaPredicted RBP8.36□□□□□ -1.07
CLK1-208ENST00000464454 TTC24A2A3L6 582 aaPredicted RBP8.35□□□□□ -1.07
CLK1-208ENST00000464454 SIAH2O43255 324 aa8.35□□□□□ -1.07
CLK1-208ENST00000464454 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLK1-208ENST00000464454 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
CLK1-208ENST00000464454 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
CLK1-208ENST00000464454 OCSTAMPQ9BR26 566 aa8.35□□□□□ -1.07
CLK1-208ENST00000464454 MAP4K5Q9Y4K4 846 aa8.35□□□□□ -1.07
CLK1-208ENST00000464454 SOX11P35716 441 aa8.34□□□□□ -1.07
CLK1-208ENST00000464454 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
CLK1-208ENST00000464454 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
CLK1-208ENST00000464454 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
CLK1-208ENST00000464454 CDK15Q96Q40 435 aa8.33□□□□□ -1.08
CLK1-208ENST00000464454 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
CLK1-208ENST00000464454 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
CLK1-208ENST00000464454 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
CLK1-208ENST00000464454 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
CLK1-208ENST00000464454 ARID5BQ14865 1188 aa8.32□□□□□ -1.08
CLK1-208ENST00000464454 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
CLK1-208ENST00000464454 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
CLK1-208ENST00000464454 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
CLK1-208ENST00000464454 ADH1CP00326 375 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms