RNA–Protein interactions for RNA: ENST00000464398.1

SMYD3-208, Transcript of SET and MYND domain containing 3, human

TSL 3

Gene SMYD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMYD3-208	ENST00000464398	SLC12A5	Q9H2X9	1139 aa		11.28	□□□□□ -0.6
SMYD3-208	ENST00000464398	CABP1	Q9NZU7	370 aa		11.28	□□□□□ -0.6
SMYD3-208	ENST00000464398	ACE	P12821	1306 aa		11.28	□□□□□ -0.6
SMYD3-208	ENST00000464398	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.27	□□□□□ -0.6
SMYD3-208	ENST00000464398	SHPRH	Q149N8	1683 aa		11.27	□□□□□ -0.6
SMYD3-208	ENST00000464398	TOM1	O60784	492 aa		11.27	□□□□□ -0.61
SMYD3-208	ENST00000464398	RGS17	Q9UGC6	210 aa	Predicted RBP	11.27	□□□□□ -0.61
SMYD3-208	ENST00000464398	EDC4	Q6P2E9	1401 aa	Known RBP	11.26	□□□□□ -0.61
SMYD3-208	ENST00000464398	NSD3	Q9BZ95	1437 aa		11.26	□□□□□ -0.61
SMYD3-208	ENST00000464398	TMC1	Q8TDI8	760 aa		11.26	□□□□□ -0.61
SMYD3-208	ENST00000464398	DDX17	Q92841	729 aa	Known RBP	11.26	□□□□□ -0.61
SMYD3-208	ENST00000464398	KTN1	Q86UP2	1357 aa	Known RBP	11.26	□□□□□ -0.61
SMYD3-208	ENST00000464398	PIP4K2B	P78356	416 aa		11.25	□□□□□ -0.61
SMYD3-208	ENST00000464398	TNS3	Q68CZ2	1445 aa		11.25	□□□□□ -0.61
SMYD3-208	ENST00000464398	NPHP3	Q7Z494	1330 aa		11.24	□□□□□ -0.61
SMYD3-208	ENST00000464398	FOXO3	O43524	673 aa		11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	XPC	Q01831	940 aa	Predicted RBP	11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	NGDN	Q8NEJ9	315 aa	Known RBP	11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	CARD14	Q9BXL6	1004 aa		11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	TERF2IP	Q9NYB0	399 aa		11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	SOS2	Q07890	1332 aa	Predicted RBP	11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	SCAF1	Q9H7N4	1312 aa	Known RBP	11.23	□□□□□ -0.61
SMYD3-208	ENST00000464398	SBNO1	A3KN83	1393 aa		11.22	□□□□□ -0.61
SMYD3-208	ENST00000464398	BRD4	O60885	1362 aa	Predicted RBP	11.22	□□□□□ -0.61
SMYD3-208	ENST00000464398	SLIT3	O75094	1523 aa		11.22	□□□□□ -0.61
SMYD3-208	ENST00000464398	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.22	□□□□□ -0.61
SMYD3-208	ENST00000464398	LTN1	O94822	1766 aa		11.21	□□□□□ -0.61
SMYD3-208	ENST00000464398	OVOS2	A0A0J9YW53	1432 aa		11.21	□□□□□ -0.61
SMYD3-208	ENST00000464398	OVOS2	Q6IE36	1432 aa		11.21	□□□□□ -0.61
SMYD3-208	ENST00000464398	PANK3	Q9H999	370 aa		11.21	□□□□□ -0.61
SMYD3-208	ENST00000464398	TTC21B	Q7Z4L5	1316 aa		11.2	□□□□□ -0.62
SMYD3-208	ENST00000464398	KRT28	Q7Z3Y7	464 aa		11.2	□□□□□ -0.62
SMYD3-208	ENST00000464398	NFAT5	O94916	1531 aa		11.19	□□□□□ -0.62
SMYD3-208	ENST00000464398	SPATA31A3	Q5VYP0	1347 aa		11.19	□□□□□ -0.62
SMYD3-208	ENST00000464398	TTC21A	Q8NDW8	1320 aa		11.19	□□□□□ -0.62
SMYD3-208	ENST00000464398	PSME1	Q06323	249 aa		11.19	□□□□□ -0.62
SMYD3-208	ENST00000464398	DDX10	Q13206	875 aa	Known RBP	11.19	□□□□□ -0.62
SMYD3-208	ENST00000464398	ZNF692	Q9BU19	519 aa	Predicted RBP	11.19	□□□□□ -0.62
SMYD3-208	ENST00000464398	PNPLA6	Q8IY17	1366 aa		11.18	□□□□□ -0.62
SMYD3-208	ENST00000464398	PER1	O15534	1290 aa	Predicted RBP	11.18	□□□□□ -0.62
SMYD3-208	ENST00000464398	ARHGEF10	O15013	1369 aa		11.17	□□□□□ -0.62
SMYD3-208	ENST00000464398	USP31	Q70CQ4	1352 aa		11.17	□□□□□ -0.62
SMYD3-208	ENST00000464398	NME9	Q86XW9	330 aa		11.17	□□□□□ -0.62
SMYD3-208	ENST00000464398	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	4e-6	■■□□□ 11.7
SMYD3-208	ENST00000464398	PEAK1	Q9H792	1746 aa		11.17	□□□□□ -0.62
SMYD3-208	ENST00000464398	PLCH1	Q4KWH8	1693 aa		11.17	□□□□□ -0.62
SMYD3-208	ENST00000464398	NSD2	O96028	1365 aa		11.16	□□□□□ -0.62
SMYD3-208	ENST00000464398	NPC1L1	Q9UHC9	1359 aa		11.16	□□□□□ -0.62
SMYD3-208	ENST00000464398	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.16	□□□□□ -0.62
SMYD3-208	ENST00000464398	PPP4R3CP	Q6ZMV5	832 aa		11.16	□□□□□ -0.62
SMYD3-208	ENST00000464398	ZRANB1	Q9UGI0	708 aa		11.16	□□□□□ -0.62
SMYD3-208	ENST00000464398	MAP2	P11137	1827 aa	Known RBP	11.16	□□□□□ -0.62
SMYD3-208	ENST00000464398	USP19	O94966	1318 aa		11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	CGNL1	Q0VF96	1302 aa		11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	LMO7	Q8WWI1	1683 aa		11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	PAK3	O75914	559 aa	Predicted RBP	11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	LRP6	O75581	1613 aa		11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	COL18A1	P39060	1754 aa		11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	RGPD5	Q99666	1765 aa		11.15	□□□□□ -0.62
SMYD3-208	ENST00000464398	FYB1	O15117	783 aa		11.14	□□□□□ -0.63
SMYD3-208	ENST00000464398	POTEA	Q6S8J7	498 aa		11.14	□□□□□ -0.63
SMYD3-208	ENST00000464398	KNSTRN	Q9Y448	316 aa		11.14	□□□□□ -0.63
SMYD3-208	ENST00000464398	JCAD	Q9P266	1359 aa		11.14	□□□□□ -0.63
SMYD3-208	ENST00000464398	NRAP	Q86VF7	1730 aa		11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	NUTM2G	Q5VZR2	741 aa		11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	ABTB2	Q8N961	1025 aa		11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	LRRC59	Q96AG4	307 aa	Known RBP	11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	GGNBP2	Q9H3C7	697 aa		11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	PARD3	Q8TEW0	1356 aa		11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	COL14A1	Q05707	1796 aa	Known RBP	11.13	□□□□□ -0.63
SMYD3-208	ENST00000464398	SMG6	Q86US8	1419 aa	Known RBP	11.12	□□□□□ -0.63
SMYD3-208	ENST00000464398	LMOD2	Q6P5Q4	547 aa		11.12	□□□□□ -0.63
SMYD3-208	ENST00000464398	ABCC6	O95255	1503 aa		11.12	□□□□□ -0.63
SMYD3-208	ENST00000464398	CC2D1B	Q5T0F9	858 aa	Known RBP	11.11	□□□□□ -0.63
SMYD3-208	ENST00000464398	NWD2	Q9ULI1	1742 aa		11.11	□□□□□ -0.63
SMYD3-208	ENST00000464398	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.1	□□□□□ -0.63
SMYD3-208	ENST00000464398	NLRP6	P59044	892 aa		11.1	□□□□□ -0.63
SMYD3-208	ENST00000464398	IFFO2	Q5TF58	517 aa		11.1	□□□□□ -0.63
SMYD3-208	ENST00000464398	CABLES1	Q8TDN4	633 aa		11.1	□□□□□ -0.63
SMYD3-208	ENST00000464398	FAM208A	Q9UK61	1670 aa	Known RBP	11.09	□□□□□ -0.63
SMYD3-208	ENST00000464398	NCBP3	Q53F19	620 aa	Known RBP	11.09	□□□□□ -0.63
SMYD3-208	ENST00000464398	NLRP13	Q86W25	1043 aa		11.09	□□□□□ -0.63
SMYD3-208	ENST00000464398	COG3	Q96JB2	828 aa		11.09	□□□□□ -0.63
SMYD3-208	ENST00000464398	RGPD2	P0DJD1	1756 aa		11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	CAMTA1	Q9Y6Y1	1673 aa		11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	CPD	O75976	1380 aa		11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	AATK	Q6ZMQ8	1374 aa		11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	WNK3	Q9BYP7	1800 aa		11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	PLEKHG5	O94827	1062 aa		11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	CNGB1	Q14028	1251 aa	Predicted RBP	11.08	□□□□□ -0.64
SMYD3-208	ENST00000464398	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.08	□□□□□ -0.64	1e-7	■■□□□ 13.1
SMYD3-208	ENST00000464398	COL3A1	P02461	1466 aa	Predicted RBP	11.07	□□□□□ -0.64
SMYD3-208	ENST00000464398	RGPD1	P0DJD0	1748 aa		11.07	□□□□□ -0.64
SMYD3-208	ENST00000464398	SPATA31A6	Q5VVP1	1343 aa		11.07	□□□□□ -0.64
SMYD3-208	ENST00000464398	KIAA0232	Q92628	1395 aa		11.06	□□□□□ -0.64
SMYD3-208	ENST00000464398	SOX12	O15370	315 aa		11.06	□□□□□ -0.64
SMYD3-208	ENST00000464398	GC	P02774	474 aa		11.06	□□□□□ -0.64
SMYD3-208	ENST00000464398	FBLN1	P23142	703 aa		11.06	□□□□□ -0.64
SMYD3-208	ENST00000464398	MORC1	Q86VD1	984 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms