RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 GPAT2Q6NUI2 795 aa9.18□□□□□ -0.94
PTPN12-210ENST00000464313 SLC24A3Q9HC58 644 aa9.18□□□□□ -0.94
PTPN12-210ENST00000464313 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
PTPN12-210ENST00000464313 CCNYL3P0C7X3 344 aa9.17□□□□□ -0.94
PTPN12-210ENST00000464313 KRI1Q8N9T8 703 aaKnown RBP9.17□□□□□ -0.94
PTPN12-210ENST00000464313 ADAMTS8Q9UP79 889 aa9.17□□□□□ -0.94
PTPN12-210ENST00000464313 TLL2Q9Y6L7 1015 aa9.17□□□□□ -0.94
PTPN12-210ENST00000464313 IGHA1P01876 353 aa9.16□□□□□ -0.94
PTPN12-210ENST00000464313 NDUFV2P19404 249 aa9.16□□□□□ -0.94
PTPN12-210ENST00000464313 BAP1Q92560 729 aa9.16□□□□□ -0.94
PTPN12-210ENST00000464313 MRPL14Q6P1L8 145 aaKnown RBP9.15□□□□□ -0.94
PTPN12-210ENST00000464313 BARGINQ6ZT62 677 aa9.15□□□□□ -0.94
PTPN12-210ENST00000464313 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
PTPN12-210ENST00000464313 SCARF1Q14162 830 aa9.14□□□□□ -0.95
PTPN12-210ENST00000464313 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
PTPN12-210ENST00000464313 PURBQ96QR8 312 aaKnown RBP9.14□□□□□ -0.95
PTPN12-210ENST00000464313 DNMT3AQ9Y6K1 912 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-210ENST00000464313 MOXD2PA6NHM9 499 aa9.13□□□□□ -0.95
PTPN12-210ENST00000464313 SSTR3P32745 418 aaPredicted RBP9.13□□□□□ -0.95
PTPN12-210ENST00000464313 PTPRNQ16849 979 aa9.13□□□□□ -0.95
PTPN12-210ENST00000464313 EVA1BQ9NVM1 165 aa9.13□□□□□ -0.95
PTPN12-210ENST00000464313 PRR7Q8TB68 274 aa9.12□□□□□ -0.95
PTPN12-210ENST00000464313 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
PTPN12-210ENST00000464313 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
PTPN12-210ENST00000464313 PPFIA3O75145 1194 aa9.1□□□□□ -0.95
PTPN12-210ENST00000464313 NNTQ13423 1086 aa9.1□□□□□ -0.95
PTPN12-210ENST00000464313 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
PTPN12-210ENST00000464313 FOXK2Q01167 660 aa9.08□□□□□ -0.96
PTPN12-210ENST00000464313 VARSP26640 1264 aaKnown RBP9.07□□□□□ -0.96
PTPN12-210ENST00000464313 IRS1P35568 1242 aa9.07□□□□□ -0.96
PTPN12-210ENST00000464313 KRT76Q01546 638 aa9.07□□□□□ -0.96
PTPN12-210ENST00000464313 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
PTPN12-210ENST00000464313 MAN1A2O60476 641 aa9.06□□□□□ -0.96
PTPN12-210ENST00000464313 TIMP2P16035 220 aa9.06□□□□□ -0.96
PTPN12-210ENST00000464313 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
PTPN12-210ENST00000464313 MTMR2Q13614 643 aa9.06□□□□□ -0.96
PTPN12-210ENST00000464313 TTLL12Q14166 644 aaPredicted RBP9.06□□□□□ -0.96
PTPN12-210ENST00000464313 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
PTPN12-210ENST00000464313 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
PTPN12-210ENST00000464313 CTHP32929 405 aa9.05□□□□□ -0.96
PTPN12-210ENST00000464313 AK7Q96M32 723 aa9.04□□□□□ -0.96
PTPN12-210ENST00000464313 ADH1CP00326 375 aa9.03□□□□□ -0.96
PTPN12-210ENST00000464313 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
PTPN12-210ENST00000464313 DESI1Q6ICB0 168 aa9.03□□□□□ -0.96
PTPN12-210ENST00000464313 GIGYF2Q6Y7W6 1299 aaKnown RBP9.03□□□□□ -0.96
PTPN12-210ENST00000464313 MPNDQ8N594 471 aa9.03□□□□□ -0.96
PTPN12-210ENST00000464313 FOXJ1Q92949 421 aa9.03□□□□□ -0.96
PTPN12-210ENST00000464313 TRIM66O15016 1216 aa9.02□□□□□ -0.97
PTPN12-210ENST00000464313 ARID5BQ14865 1188 aa9.02□□□□□ -0.97
PTPN12-210ENST00000464313 ZNF385CQ66K41 422 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-210ENST00000464313 KANK3Q6NY19 840 aa9.02□□□□□ -0.97
PTPN12-210ENST00000464313 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
PTPN12-210ENST00000464313 BEGAINQ9BUH8 593 aa9.02□□□□□ -0.97
PTPN12-210ENST00000464313 KLF16Q9BXK1 252 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-210ENST00000464313 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
PTPN12-210ENST00000464313 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 CFAP99D6REC4 459 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 ADAM23O75077 832 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 LYPD8Q6UX82 237 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 FAM174AQ8TBP5 190 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 ZFAND3Q9H8U3 227 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 MAP10Q9P2G4 905 aa9.01□□□□□ -0.97
PTPN12-210ENST00000464313 AMHR2Q16671 573 aa9□□□□□ -0.97
PTPN12-210ENST00000464313 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
PTPN12-210ENST00000464313 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
PTPN12-210ENST00000464313 C6orf118Q5T5N4 469 aa8.99□□□□□ -0.97
PTPN12-210ENST00000464313 RSBN1LQ6PCB5 846 aaPredicted RBP8.99□□□□□ -0.97
PTPN12-210ENST00000464313 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-210ENST00000464313 NR3C2P08235 984 aa8.98□□□□□ -0.97
PTPN12-210ENST00000464313 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
PTPN12-210ENST00000464313 GPBP1L1Q9HC44 474 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-210ENST00000464313 F12P00748 615 aaPredicted RBP8.97□□□□□ -0.97
PTPN12-210ENST00000464313 PDE4DQ08499 809 aa8.97□□□□□ -0.97
PTPN12-210ENST00000464313 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
PTPN12-210ENST00000464313 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
PTPN12-210ENST00000464313 PSMG3-AS1Q96PY0 264 aa8.97□□□□□ -0.97
PTPN12-210ENST00000464313 CDK15Q96Q40 435 aa8.97□□□□□ -0.97
PTPN12-210ENST00000464313 ARHGEF15O94989 841 aa8.96□□□□□ -0.98
PTPN12-210ENST00000464313 HRCP23327 699 aa8.96□□□□□ -0.98
PTPN12-210ENST00000464313 MARSP56192 900 aaKnown RBP8.96□□□□□ -0.98
PTPN12-210ENST00000464313 COL25A1Q9BXS0 654 aaPredicted RBP8.96□□□□□ -0.98
PTPN12-210ENST00000464313 KRTAP9-2Q9BYQ4 174 aa8.96□□□□□ -0.98
PTPN12-210ENST00000464313 AGERQ15109 404 aa8.95□□□□□ -0.98
PTPN12-210ENST00000464313 SPTLC1O15269 473 aa8.94□□□□□ -0.98
PTPN12-210ENST00000464313 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-210ENST00000464313 GJA5P36382 358 aa8.94□□□□□ -0.98
PTPN12-210ENST00000464313 GRM5P41594 1212 aa8.94□□□□□ -0.98
PTPN12-210ENST00000464313 CSPP1Q1MSJ5 1256 aa8.94□□□□□ -0.98
PTPN12-210ENST00000464313 WHAMMQ8TF30 809 aa8.94□□□□□ -0.98
PTPN12-210ENST00000464313 SCARF2Q96GP6 870 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-210ENST00000464313 ZBTB3Q9H5J0 574 aa8.94□□□□□ -0.98
PTPN12-210ENST00000464313 MSTNO14793 375 aa8.93□□□□□ -0.98
PTPN12-210ENST00000464313 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
PTPN12-210ENST00000464313 KRTAP9-6A0A140TA67 174 aa8.92□□□□□ -0.98
PTPN12-210ENST00000464313 BMP2P12643 396 aa8.92□□□□□ -0.98
PTPN12-210ENST00000464313 NR5A1Q13285 461 aa8.92□□□□□ -0.98
PTPN12-210ENST00000464313 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
PTPN12-210ENST00000464313 DNMT3LQ9UJW3 386 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms