RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
CTDSP1-206ENST00000464255 GLI3P10071 1580 aa18.82■□□□□ 0.6
CTDSP1-206ENST00000464255 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
CTDSP1-206ENST00000464255 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
CTDSP1-206ENST00000464255 VPS72Q15906 364 aa18.81■□□□□ 0.6
CTDSP1-206ENST00000464255 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
CTDSP1-206ENST00000464255 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
CTDSP1-206ENST00000464255 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-206ENST00000464255 SRPK2P78362 688 aaKnown RBP18.79■□□□□ 0.6
CTDSP1-206ENST00000464255 PLCH1Q4KWH8 1693 aa18.78■□□□□ 0.6
CTDSP1-206ENST00000464255 ROCK2O75116 1388 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-206ENST00000464255 NWD2Q9ULI1 1742 aa18.77■□□□□ 0.6
CTDSP1-206ENST00000464255 QRICH2Q9H0J4 1663 aa18.77■□□□□ 0.6
CTDSP1-206ENST00000464255 BTG4Q9NY30 223 aa18.77■□□□□ 0.6
CTDSP1-206ENST00000464255 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
CTDSP1-206ENST00000464255 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
CTDSP1-206ENST00000464255 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
CTDSP1-206ENST00000464255 CABP1Q9NZU7 370 aa18.76■□□□□ 0.59
CTDSP1-206ENST00000464255 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
CTDSP1-206ENST00000464255 KIAA0232Q92628 1395 aa18.73■□□□□ 0.59
CTDSP1-206ENST00000464255 NRAPQ86VF7 1730 aa18.73■□□□□ 0.59
CTDSP1-206ENST00000464255 COL14A1Q05707 1796 aaKnown RBP18.72■□□□□ 0.59
CTDSP1-206ENST00000464255 SSH2Q76I76 1423 aa18.72■□□□□ 0.59
CTDSP1-206ENST00000464255 USP19O94966 1318 aa18.72■□□□□ 0.59
CTDSP1-206ENST00000464255 EVC2Q86UK5 1308 aa18.72■□□□□ 0.59
CTDSP1-206ENST00000464255 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
CTDSP1-206ENST00000464255 ABTB2Q8N961 1025 aa18.71■□□□□ 0.59
CTDSP1-206ENST00000464255 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
CTDSP1-206ENST00000464255 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
CTDSP1-206ENST00000464255 ZC3H6P61129 1189 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-206ENST00000464255 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-206ENST00000464255 SPATA31A5Q5VU36 1347 aa18.7■□□□□ 0.58
CTDSP1-206ENST00000464255 SPATA31A7Q8IWB4 1347 aa18.7■□□□□ 0.58
CTDSP1-206ENST00000464255 USP6P35125 1406 aa18.69■□□□□ 0.58
CTDSP1-206ENST00000464255 PHRF1Q9P1Y6 1649 aaKnown RBP18.69■□□□□ 0.58
CTDSP1-206ENST00000464255 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
CTDSP1-206ENST00000464255 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
CTDSP1-206ENST00000464255 CARD11Q9BXL7 1154 aa18.68■□□□□ 0.58
CTDSP1-206ENST00000464255 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
CTDSP1-206ENST00000464255 GCP02774 474 aa18.67■□□□□ 0.58
CTDSP1-206ENST00000464255 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-206ENST00000464255 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
CTDSP1-206ENST00000464255 CPDO75976 1380 aa18.66■□□□□ 0.58
CTDSP1-206ENST00000464255 NRKQ7Z2Y5 1582 aa18.65■□□□□ 0.58
CTDSP1-206ENST00000464255 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
CTDSP1-206ENST00000464255 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
CTDSP1-206ENST00000464255 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
CTDSP1-206ENST00000464255 SPATA31A1Q5TZJ5 1347 aa18.64■□□□□ 0.57
CTDSP1-206ENST00000464255 CPSF1Q10570 1443 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-206ENST00000464255 CAMTA1Q9Y6Y1 1673 aa18.63■□□□□ 0.57
CTDSP1-206ENST00000464255 NLRP6P59044 892 aa18.62■□□□□ 0.57
CTDSP1-206ENST00000464255 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
CTDSP1-206ENST00000464255 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
CTDSP1-206ENST00000464255 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
CTDSP1-206ENST00000464255 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
CTDSP1-206ENST00000464255 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
CTDSP1-206ENST00000464255 TESK2Q96S53 571 aa18.6■□□□□ 0.57
CTDSP1-206ENST00000464255 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
CTDSP1-206ENST00000464255 SLIT3O75094 1523 aa18.59■□□□□ 0.57
CTDSP1-206ENST00000464255 BLMP54132 1417 aaPredicted RBP18.59■□□□□ 0.57
CTDSP1-206ENST00000464255 THSD7AQ9UPZ6 1657 aa18.59■□□□□ 0.57
CTDSP1-206ENST00000464255 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.57
CTDSP1-206ENST00000464255 FAM182BQ5T319 152 aa18.58■□□□□ 0.56
CTDSP1-206ENST00000464255 AKAP12Q02952 1782 aa18.58■□□□□ 0.56
CTDSP1-206ENST00000464255 DEFB132Q7Z7B7 95 aa18.57■□□□□ 0.56
CTDSP1-206ENST00000464255 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
CTDSP1-206ENST00000464255 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
CTDSP1-206ENST00000464255 A0A0G2JS52 829 aa18.56■□□□□ 0.56
CTDSP1-206ENST00000464255 EVA1CP58658 441 aa18.56■□□□□ 0.56
CTDSP1-206ENST00000464255 MYT1Q01538 1121 aa18.56■□□□□ 0.56
CTDSP1-206ENST00000464255 BARGINQ6ZT62 677 aa18.56■□□□□ 0.56
CTDSP1-206ENST00000464255 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
CTDSP1-206ENST00000464255 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
CTDSP1-206ENST00000464255 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
CTDSP1-206ENST00000464255 TTC21AQ8NDW8 1320 aa18.55■□□□□ 0.56
CTDSP1-206ENST00000464255 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
CTDSP1-206ENST00000464255 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
CTDSP1-206ENST00000464255 COL5A2P05997 1499 aaPredicted RBP18.54■□□□□ 0.56
CTDSP1-206ENST00000464255 ARHGEF25Q86VW2 580 aa18.54■□□□□ 0.56
CTDSP1-206ENST00000464255 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
CTDSP1-206ENST00000464255 COL18A1P39060 1754 aa18.53■□□□□ 0.56
CTDSP1-206ENST00000464255 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.56
CTDSP1-206ENST00000464255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTDSP1-206ENST00000464255 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
CTDSP1-206ENST00000464255 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
CTDSP1-206ENST00000464255 MON2Q7Z3U7 1717 aa18.51■□□□□ 0.55
CTDSP1-206ENST00000464255 NME9Q86XW9 330 aa18.5■□□□□ 0.55
CTDSP1-206ENST00000464255 NFAT5O94916 1531 aa18.49■□□□□ 0.55
CTDSP1-206ENST00000464255 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
CTDSP1-206ENST00000464255 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
CTDSP1-206ENST00000464255 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
CTDSP1-206ENST00000464255 A0A1W2PP64 1363 aa18.48■□□□□ 0.55
CTDSP1-206ENST00000464255 SOX12O15370 315 aa18.48■□□□□ 0.55
CTDSP1-206ENST00000464255 CRB1P82279 1406 aa18.48■□□□□ 0.55
CTDSP1-206ENST00000464255 SF3B2Q13435 895 aaKnown RBP18.47■□□□□ 0.55
CTDSP1-206ENST00000464255 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
CTDSP1-206ENST00000464255 FAM196AQ6ZSG2 479 aa18.46■□□□□ 0.55
CTDSP1-206ENST00000464255 HDGFL2Q7Z4V5 671 aaPredicted RBP18.46■□□□□ 0.55
CTDSP1-206ENST00000464255 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.55
CTDSP1-206ENST00000464255 USP47Q96K76 1375 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms