RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 EVA1BQ9NVM1 165 aa10.38□□□□□ -0.75
CD46-211ENST00000464082 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
CD46-211ENST00000464082 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
CD46-211ENST00000464082 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
CD46-211ENST00000464082 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
CD46-211ENST00000464082 WDR4P57081 412 aaKnown RBP10.36□□□□□ -0.75
CD46-211ENST00000464082 SCARF1Q14162 830 aa10.36□□□□□ -0.75
CD46-211ENST00000464082 ZNF511Q8NB15 262 aa10.36□□□□□ -0.75
CD46-211ENST00000464082 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
CD46-211ENST00000464082 GSK3AP49840 483 aa10.35□□□□□ -0.75
CD46-211ENST00000464082 KCNH2Q12809 1159 aa10.35□□□□□ -0.75
CD46-211ENST00000464082 PTPRNQ16849 979 aa10.35□□□□□ -0.75
CD46-211ENST00000464082 PLEKHG3A1L390 1219 aa10.34□□□□□ -0.75
CD46-211ENST00000464082 VARSP26640 1264 aaKnown RBP10.34□□□□□ -0.75
CD46-211ENST00000464082 CLCN1P35523 988 aa10.34□□□□□ -0.75
CD46-211ENST00000464082 KCTD17Q8N5Z5 321 aa10.34□□□□□ -0.75
CD46-211ENST00000464082 NCAPD3P42695 1498 aa10.34□□□□□ -0.75
CD46-211ENST00000464082 ADH1CP00326 375 aa10.33□□□□□ -0.76
CD46-211ENST00000464082 NDUFV2P19404 249 aa10.33□□□□□ -0.76
CD46-211ENST00000464082 MPNDQ8N594 471 aa10.33□□□□□ -0.76
CD46-211ENST00000464082 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
CD46-211ENST00000464082 PEG3Q9GZU2 1588 aa10.32□□□□□ -0.76
CD46-211ENST00000464082 BAZ1AQ9NRL2 1556 aaPredicted RBP10.32□□□□□ -0.76
CD46-211ENST00000464082 KCNMA1Q12791 1236 aa10.31□□□□□ -0.76
CD46-211ENST00000464082 HMGXB3Q12766 1538 aa10.31□□□□□ -0.76
CD46-211ENST00000464082 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
CD46-211ENST00000464082 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
CD46-211ENST00000464082 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
CD46-211ENST00000464082 MROH2BQ7Z745 1585 aa10.3□□□□□ -0.76
CD46-211ENST00000464082 C6orf118Q5T5N4 469 aa10.29□□□□□ -0.76
CD46-211ENST00000464082 SPIRE2Q8WWL2 714 aa10.29□□□□□ -0.76
CD46-211ENST00000464082 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
CD46-211ENST00000464082 MAN1A2O60476 641 aa10.28□□□□□ -0.76
CD46-211ENST00000464082 PPFIA3O75145 1194 aa10.28□□□□□ -0.76
CD46-211ENST00000464082 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
CD46-211ENST00000464082 ZIC2O95409 532 aaPredicted RBP10.26□□□□□ -0.77
CD46-211ENST00000464082 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
CD46-211ENST00000464082 KRI1Q8N9T8 703 aaKnown RBP10.26□□□□□ -0.77
CD46-211ENST00000464082 FOXJ1Q92949 421 aa10.26□□□□□ -0.77
CD46-211ENST00000464082 NR3C2P08235 984 aa10.25□□□□□ -0.77
CD46-211ENST00000464082 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
CD46-211ENST00000464082 CDK15Q96Q40 435 aa10.25□□□□□ -0.77
CD46-211ENST00000464082 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
CD46-211ENST00000464082 CTHP32929 405 aa10.23□□□□□ -0.77
CD46-211ENST00000464082 MTMR2Q13614 643 aa10.23□□□□□ -0.77
CD46-211ENST00000464082 DESI1Q6ICB0 168 aa10.23□□□□□ -0.77
CD46-211ENST00000464082 WIZO95785 1651 aa10.22□□□□□ -0.77
CD46-211ENST00000464082 GRM5P41594 1212 aa10.22□□□□□ -0.77
CD46-211ENST00000464082 KRT76Q01546 638 aa10.22□□□□□ -0.77
CD46-211ENST00000464082 GPR161Q8N6U8 529 aaKnown RBP10.22□□□□□ -0.77
CD46-211ENST00000464082 BMP2P12643 396 aa10.21□□□□□ -0.77
CD46-211ENST00000464082 PLCB2Q00722 1185 aa10.21□□□□□ -0.77
CD46-211ENST00000464082 RASSF7Q02833 373 aa10.21□□□□□ -0.77
CD46-211ENST00000464082 TMEM151AQ8N4L1 468 aa10.21□□□□□ -0.77
CD46-211ENST00000464082 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
CD46-211ENST00000464082 BAZ1BQ9UIG0 1483 aaKnown RBP10.21□□□□□ -0.78
CD46-211ENST00000464082 GDF11O95390 407 aa10.2□□□□□ -0.78
CD46-211ENST00000464082 C4orf48Q5BLP8 95 aa10.2□□□□□ -0.78
CD46-211ENST00000464082 LYPD8Q6UX82 237 aa10.2□□□□□ -0.78
CD46-211ENST00000464082 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
CD46-211ENST00000464082 SOS2Q07890 1332 aaPredicted RBP10.18□□□□□ -0.78
CD46-211ENST00000464082 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
CD46-211ENST00000464082 NR5A1Q13285 461 aa10.18□□□□□ -0.78
CD46-211ENST00000464082 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
CD46-211ENST00000464082 CNTNAP3BQ96NU0 1288 aa10.18□□□□□ -0.78
CD46-211ENST00000464082 CNTNAP3Q9BZ76 1288 aa10.18□□□□□ -0.78
CD46-211ENST00000464082 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
CD46-211ENST00000464082 CFAP99D6REC4 459 aa10.17□□□□□ -0.78
CD46-211ENST00000464082 MEIOBQ8N635 442 aa10.17□□□□□ -0.78
CD46-211ENST00000464082 ADAMTS8Q9UP79 889 aa10.17□□□□□ -0.78
CD46-211ENST00000464082 NESP48681 1621 aa10.16□□□□□ -0.78
CD46-211ENST00000464082 UPP2O95045 317 aa10.15□□□□□ -0.78
CD46-211ENST00000464082 F12P00748 615 aaPredicted RBP10.15□□□□□ -0.78
CD46-211ENST00000464082 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.78
CD46-211ENST00000464082 TULP1O00294 542 aaPredicted RBP10.14□□□□□ -0.79
CD46-211ENST00000464082 AGERQ15109 404 aa10.14□□□□□ -0.79
CD46-211ENST00000464082 SPTLC1O15269 473 aa10.12□□□□□ -0.79
CD46-211ENST00000464082 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
CD46-211ENST00000464082 RNFT1Q5M7Z0 435 aa10.11□□□□□ -0.79
CD46-211ENST00000464082 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
CD46-211ENST00000464082 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
CD46-211ENST00000464082 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
CD46-211ENST00000464082 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
CD46-211ENST00000464082 KIF21AQ7Z4S6 1674 aa10.11□□□□□ -0.79
CD46-211ENST00000464082 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
CD46-211ENST00000464082 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
CD46-211ENST00000464082 PER1O15534 1290 aaPredicted RBP10.1□□□□□ -0.79
CD46-211ENST00000464082 HRCP23327 699 aa10.1□□□□□ -0.79
CD46-211ENST00000464082 PTSQ03393 145 aa10.1□□□□□ -0.79
CD46-211ENST00000464082 ZNF385CQ66K41 422 aaPredicted RBP10.1□□□□□ -0.79
CD46-211ENST00000464082 FSHRP23945 695 aa10.09□□□□□ -0.79
CD46-211ENST00000464082 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
CD46-211ENST00000464082 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
CD46-211ENST00000464082 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
CD46-211ENST00000464082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.08□□□□□ -0.8
CD46-211ENST00000464082 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
CD46-211ENST00000464082 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
CD46-211ENST00000464082 FIGNL2A6NMB9 653 aa10.07□□□□□ -0.8
CD46-211ENST00000464082 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
CD46-211ENST00000464082 GJA5P36382 358 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms