RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 ICE2Q659A1 982 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 SAMD9Q5K651 1589 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 WDR7Q9Y4E6 1490 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 GOLIM4O00461 696 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 DHX16O60231 1041 aaKnown RBP8.72□□□□□ -1.01
CDKL5-203ENST00000463994 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 MAPK8IP3Q9UPT6 1336 aa8.72□□□□□ -1.01
CDKL5-203ENST00000463994 TCOF1Q13428 1488 aaKnown RBP8.72□□□□□ -1.01
CDKL5-203ENST00000463994 LRPPRCP42704 1394 aaKnown RBP8.72□□□□□ -1.01
CDKL5-203ENST00000463994 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.01
CDKL5-203ENST00000463994 ZNF445P59923 1031 aa8.71□□□□□ -1.01
CDKL5-203ENST00000463994 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.01
CDKL5-203ENST00000463994 MAP2K1Q02750 393 aaPredicted RBP8.71□□□□□ -1.02
CDKL5-203ENST00000463994 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.02
CDKL5-203ENST00000463994 RAI14Q9P0K7 980 aa8.71□□□□□ -1.02
CDKL5-203ENST00000463994 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
CDKL5-203ENST00000463994 SH3BP1Q9Y3L3 701 aa8.71□□□□□ -1.02
CDKL5-203ENST00000463994 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
CDKL5-203ENST00000463994 GOLGA6L22H0YM25 854 aa8.7□□□□□ -1.02
CDKL5-203ENST00000463994 IRF6O14896 467 aa8.7□□□□□ -1.02
CDKL5-203ENST00000463994 CWC22Q9HCG8 908 aaKnown RBP8.7□□□□□ -1.02
CDKL5-203ENST00000463994 POLR1AO95602 1720 aaPredicted RBP8.7□□□□□ -1.02
CDKL5-203ENST00000463994 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
CDKL5-203ENST00000463994 KLHL40Q2TBA0 621 aa8.7□□□□□ -1.02
CDKL5-203ENST00000463994 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
CDKL5-203ENST00000463994 APBB1O00213 710 aa8.69□□□□□ -1.02
CDKL5-203ENST00000463994 OS9Q13438 667 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-203ENST00000463994 DIAPH3Q9NSV4 1193 aa8.69□□□□□ -1.02
CDKL5-203ENST00000463994 MORC2Q9Y6X9 1032 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-203ENST00000463994 SETQ01105 290 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-203ENST00000463994 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-203ENST00000463994 DONSONQ9NYP3 566 aa8.69□□□□□ -1.02
CDKL5-203ENST00000463994 DDX41Q9UJV9 622 aaKnown RBP8.69□□□□□ -1.02
CDKL5-203ENST00000463994 KIF16BQ96L93 1317 aa8.69□□□□□ -1.02
CDKL5-203ENST00000463994 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
CDKL5-203ENST00000463994 ERICH4A6NGS2 130 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 KIF1CO43896 1103 aaKnown RBP8.68□□□□□ -1.02
CDKL5-203ENST00000463994 RAD51AP2Q09MP3 1159 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 SEMA3FQ13275 785 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 FAM177BA6PVY3 158 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 PIBF1Q8WXW3 757 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 CTNNA3Q9UI47 895 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 CFAP74Q9C0B2 1584 aa8.68□□□□□ -1.02
CDKL5-203ENST00000463994 DDIT3P35638 169 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 CHAF1AQ13111 956 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 HSCBQ8IWL3 235 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 KRT222Q8N1A0 295 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 KIF7Q2M1P5 1343 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 DHX29Q7Z478 1369 aaKnown RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 GOLGA6L6A8MZA4 724 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 DENND4BO75064 1496 aaPredicted RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 NOLC1Q14978 699 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 MNS1Q8NEH6 495 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 DDX49Q9Y6V7 483 aaKnown RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 ROCK2O75116 1388 aaKnown RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 CTIFO43310 598 aaKnown RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 HNRNPH2P55795 449 aaKnown RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 SYCP1Q15431 976 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 GPATCH11Q8N954 259 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
CDKL5-203ENST00000463994 RBM28Q9NW13 759 aaKnown RBP8.67□□□□□ -1.02
CDKL5-203ENST00000463994 NCOA3Q9Y6Q9 1424 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 RAD50Q92878 1312 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 TDO2P48775 406 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-203ENST00000463994 ABCA9Q8IUA7 1624 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 ARAP3Q8WWN8 1544 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 KIAA1107Q9UPP5 1409 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 ZMYM3Q14202 1370 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 TTC36A6NLP5 189 aa8.66□□□□□ -1.02
CDKL5-203ENST00000463994 FKBP5Q13451 457 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-203ENST00000463994 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-203ENST00000463994 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDKL5-203ENST00000463994 MIA2Q96PC5 1412 aa8.65□□□□□ -1.02
CDKL5-203ENST00000463994 BRD4O60885 1362 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-203ENST00000463994 CASQ1P31415 396 aa8.65□□□□□ -1.02
CDKL5-203ENST00000463994 NBPF9Q3BBW0 867 aa8.65□□□□□ -1.02
CDKL5-203ENST00000463994 PSMD1Q99460 953 aa8.65□□□□□ -1.02
CDKL5-203ENST00000463994 ZNF853P0CG23 659 aa8.65□□□□□ -1.03
CDKL5-203ENST00000463994 SSR1P43307 286 aaKnown RBP8.65□□□□□ -1.03
CDKL5-203ENST00000463994 TMX1Q9H3N1 280 aa8.65□□□□□ -1.03
CDKL5-203ENST00000463994 MED4Q9NPJ6 270 aa8.65□□□□□ -1.03
CDKL5-203ENST00000463994 TSPOAP1O95153 1857 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 NPC1L1Q9UHC9 1359 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 SPTLC3Q9NUV7 552 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 NEO1Q92859 1461 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
CDKL5-203ENST00000463994 CYP2C19P33261 490 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 SMC5Q8IY18 1101 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 GOLGA6L1Q8N7Z2 621 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 CDCA7LQ96GN5 454 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 STK26Q9P289 416 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 RAPGEF6Q8TEU7 1601 aa8.64□□□□□ -1.03
CDKL5-203ENST00000463994 SPATA31E1Q6ZUB1 1445 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms