RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 EP400Q96L91 3159 aa25.27■■□□□ 1.64
COL5A1-204ENST00000463925 PAK3O75914 559 aaPredicted RBP25.26■■□□□ 1.63
COL5A1-204ENST00000463925 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
COL5A1-204ENST00000463925 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
COL5A1-204ENST00000463925 CCDC125Q86Z20 511 aa25.25■■□□□ 1.63
COL5A1-204ENST00000463925 PLEKHG3A1L390 1219 aa25.24■■□□□ 1.63
COL5A1-204ENST00000463925 ONECUT3O60422 494 aaPredicted RBP25.24■■□□□ 1.63
COL5A1-204ENST00000463925 BRWD3Q6RI45 1802 aa25.23■■□□□ 1.63
COL5A1-204ENST00000463925 CCDC9Q9Y3X0 531 aaKnown RBP25.23■■□□□ 1.63
COL5A1-204ENST00000463925 ACEP12821 1306 aa25.22■■□□□ 1.63
COL5A1-204ENST00000463925 SEPT12Q8IYM1 358 aa25.22■■□□□ 1.63
COL5A1-204ENST00000463925 BTG4Q9NY30 223 aa25.22■■□□□ 1.63
COL5A1-204ENST00000463925 QRICH2Q9H0J4 1663 aa25.22■■□□□ 1.63
COL5A1-204ENST00000463925 TRPM1Q7Z4N2 1603 aa25.22■■□□□ 1.63
COL5A1-204ENST00000463925 PHRF1Q9P1Y6 1649 aaKnown RBP25.22■■□□□ 1.63
COL5A1-204ENST00000463925 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
COL5A1-204ENST00000463925 NBPF8Q3BBV2 869 aa25.2■■□□□ 1.62
COL5A1-204ENST00000463925 BLMP54132 1417 aaPredicted RBP25.19■■□□□ 1.62
COL5A1-204ENST00000463925 SRPK2P78362 688 aaKnown RBP25.18■■□□□ 1.62
COL5A1-204ENST00000463925 PRDM11Q9NQV5 511 aa25.18■■□□□ 1.62
COL5A1-204ENST00000463925 PPIP5K1Q6PFW1 1433 aa25.18■■□□□ 1.62
COL5A1-204ENST00000463925 KIAA0232Q92628 1395 aa25.16■■□□□ 1.62
COL5A1-204ENST00000463925 KRT27Q7Z3Y8 459 aa25.14■■□□□ 1.62
COL5A1-204ENST00000463925 CABP2Q9NPB3 220 aa25.14■■□□□ 1.62
COL5A1-204ENST00000463925 BRD4O60885 1362 aaPredicted RBP25.14■■□□□ 1.61
COL5A1-204ENST00000463925 NRKQ7Z2Y5 1582 aa25.14■■□□□ 1.61
COL5A1-204ENST00000463925 SPATA31A5Q5VU36 1347 aa25.13■■□□□ 1.61
COL5A1-204ENST00000463925 SPATA31A7Q8IWB4 1347 aa25.13■■□□□ 1.61
COL5A1-204ENST00000463925 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
COL5A1-204ENST00000463925 ROCK2O75116 1388 aaKnown RBP25.13■■□□□ 1.61
COL5A1-204ENST00000463925 FAM98CQ17RN3 349 aaKnown RBP25.12■■□□□ 1.61
COL5A1-204ENST00000463925 USP19O94966 1318 aa25.12■■□□□ 1.61
COL5A1-204ENST00000463925 NUTM2GQ5VZR2 741 aa25.11■■□□□ 1.61
COL5A1-204ENST00000463925 ABTB2Q8N961 1025 aa25.1■■□□□ 1.61
COL5A1-204ENST00000463925 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
COL5A1-204ENST00000463925 A0A0G2JS52 829 aa25.09■■□□□ 1.61
COL5A1-204ENST00000463925 MYT1Q01538 1121 aa25.09■■□□□ 1.61
COL5A1-204ENST00000463925 EVC2Q86UK5 1308 aa25.09■■□□□ 1.61
COL5A1-204ENST00000463925 CPDO75976 1380 aa25.08■■□□□ 1.61
COL5A1-204ENST00000463925 ZC3H6P61129 1189 aaKnown RBP25.08■■□□□ 1.61
COL5A1-204ENST00000463925 CHRNA2Q15822 529 aa25.08■■□□□ 1.61
COL5A1-204ENST00000463925 USP6P35125 1406 aa25.08■■□□□ 1.61
COL5A1-204ENST00000463925 NLRP13Q86W25 1043 aa25.06■■□□□ 1.6
COL5A1-204ENST00000463925 CABP1Q9NZU7 370 aa25.06■■□□□ 1.6
COL5A1-204ENST00000463925 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
COL5A1-204ENST00000463925 SPATA31A1Q5TZJ5 1347 aa25.06■■□□□ 1.6
COL5A1-204ENST00000463925 LMO7Q8WWI1 1683 aa25.05■■□□□ 1.6
COL5A1-204ENST00000463925 SF3B2Q13435 895 aaKnown RBP25.05■■□□□ 1.6
COL5A1-204ENST00000463925 SSH2Q76I76 1423 aa25.03■■□□□ 1.6
COL5A1-204ENST00000463925 CAMTA1Q9Y6Y1 1673 aa25.02■■□□□ 1.6
COL5A1-204ENST00000463925 STRN4Q9NRL3 753 aa25.02■■□□□ 1.6
COL5A1-204ENST00000463925 GCP02774 474 aa25.01■■□□□ 1.59
COL5A1-204ENST00000463925 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
COL5A1-204ENST00000463925 SBNO2Q9Y2G9 1366 aa25.01■■□□□ 1.59
COL5A1-204ENST00000463925 SLIT3O75094 1523 aa25.01■■□□□ 1.59
COL5A1-204ENST00000463925 PIK3C2AO00443 1686 aa24.98■■□□□ 1.59
COL5A1-204ENST00000463925 AKAP12Q02952 1782 aa24.97■■□□□ 1.59
COL5A1-204ENST00000463925 RGPD1P0DJD0 1748 aa24.97■■□□□ 1.59
COL5A1-204ENST00000463925 TONSLQ96HA7 1378 aa24.96■■□□□ 1.59
COL5A1-204ENST00000463925 EVA1CP58658 441 aa24.96■■□□□ 1.59
COL5A1-204ENST00000463925 NLRP6P59044 892 aa24.96■■□□□ 1.59
COL5A1-204ENST00000463925 BARGINQ6ZT62 677 aa24.96■■□□□ 1.59
COL5A1-204ENST00000463925 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
COL5A1-204ENST00000463925 BAG6P46379 1132 aa24.95■■□□□ 1.58
COL5A1-204ENST00000463925 ZNF692Q9BU19 519 aaPredicted RBP24.95■■□□□ 1.58
COL5A1-204ENST00000463925 LARP1Q6PKG0 1096 aaKnown RBP24.94■■□□□ 1.58
COL5A1-204ENST00000463925 CPSF1Q10570 1443 aaKnown RBP24.94■■□□□ 1.58
COL5A1-204ENST00000463925 CARD11Q9BXL7 1154 aa24.93■■□□□ 1.58
COL5A1-204ENST00000463925 DISP2A7MBM2 1401 aa24.93■■□□□ 1.58
COL5A1-204ENST00000463925 SRCAPQ6ZRS2 3230 aa24.92■■□□□ 1.58
COL5A1-204ENST00000463925 FAM182BQ5T319 152 aa24.92■■□□□ 1.58
COL5A1-204ENST00000463925 TCP11L2Q8N4U5 519 aa24.92■■□□□ 1.58
COL5A1-204ENST00000463925 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
COL5A1-204ENST00000463925 AATKQ6ZMQ8 1374 aa24.92■■□□□ 1.58
COL5A1-204ENST00000463925 TTC21BQ7Z4L5 1316 aa24.91■■□□□ 1.58
COL5A1-204ENST00000463925 THRAP3Q9Y2W1 955 aaKnown RBP24.91■■□□□ 1.58
COL5A1-204ENST00000463925 TNS1Q9HBL0 1735 aaKnown RBP24.91■■□□□ 1.58
COL5A1-204ENST00000463925 TTC21AQ8NDW8 1320 aa24.9■■□□□ 1.58
COL5A1-204ENST00000463925 CRB1P82279 1406 aa24.88■■□□□ 1.57
COL5A1-204ENST00000463925 FAM196AQ6ZSG2 479 aa24.88■■□□□ 1.57
COL5A1-204ENST00000463925 MON2Q7Z3U7 1717 aa24.88■■□□□ 1.57
COL5A1-204ENST00000463925 COL18A1P39060 1754 aa24.88■■□□□ 1.57
COL5A1-204ENST00000463925 TRIM26Q12899 539 aaPredicted RBP24.87■■□□□ 1.57
COL5A1-204ENST00000463925 KTN1Q86UP2 1357 aaKnown RBP24.87■■□□□ 1.57
COL5A1-204ENST00000463925 PARP4Q9UKK3 1724 aaKnown RBP24.86■■□□□ 1.57
COL5A1-204ENST00000463925 KCNH5Q8NCM2 988 aa24.85■■□□□ 1.57
COL5A1-204ENST00000463925 ZBTB7CA1YPR0 619 aa24.84■■□□□ 1.57
COL5A1-204ENST00000463925 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
COL5A1-204ENST00000463925 CD163L1Q9NR16 1453 aa24.83■■□□□ 1.57
COL5A1-204ENST00000463925 NFAT5O94916 1531 aa24.83■■□□□ 1.57
COL5A1-204ENST00000463925 EN1Q05925 392 aaPredicted RBP24.83■■□□□ 1.57
COL5A1-204ENST00000463925 ARHGEF25Q86VW2 580 aa24.83■■□□□ 1.57
COL5A1-204ENST00000463925 USP54Q70EL1 1684 aa24.82■■□□□ 1.56
COL5A1-204ENST00000463925 ABCC6O95255 1503 aa24.81■■□□□ 1.56
COL5A1-204ENST00000463925 TRIM37O94972 964 aa24.8■■□□□ 1.56
COL5A1-204ENST00000463925 PUS7Q96PZ0 661 aaKnown RBP24.8■■□□□ 1.56
COL5A1-204ENST00000463925 WDR17Q8IZU2 1322 aa24.8■■□□□ 1.56
COL5A1-204ENST00000463925 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
COL5A1-204ENST00000463925 AXIN2Q9Y2T1 843 aa24.79■■□□□ 1.56
COL5A1-204ENST00000463925 PARD3Q8TEW0 1356 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms