RNA–Protein interactions for RNA: ENST00000463752.1

PRKCB-203, Transcript of protein kinase C beta, humanhuman

TSL 5

Gene PRKCB, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-203ENST00000463752 TOPAZ1Q8N9V7 1692 aa8.44□□□□□ -1.06
PRKCB-203ENST00000463752 VPS72Q15906 364 aa8.44□□□□□ -1.06
PRKCB-203ENST00000463752 ZNF692Q9BU19 519 aaPredicted RBP8.44□□□□□ -1.06
PRKCB-203ENST00000463752 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
PRKCB-203ENST00000463752 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
PRKCB-203ENST00000463752 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
PRKCB-203ENST00000463752 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
PRKCB-203ENST00000463752 CCDC9Q9Y3X0 531 aaKnown RBP8.43□□□□□ -1.06
PRKCB-203ENST00000463752 ACEP12821 1306 aa8.43□□□□□ -1.06
PRKCB-203ENST00000463752 PRR36Q9H6K5 1346 aa8.43□□□□□ -1.06
PRKCB-203ENST00000463752 TONSLQ96HA7 1378 aa8.43□□□□□ -1.06
PRKCB-203ENST00000463752 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
PRKCB-203ENST00000463752 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
PRKCB-203ENST00000463752 NBPF1Q3BBV0 1214 aa8.42□□□□□ -1.06
PRKCB-203ENST00000463752 NBPF8Q3BBV2 869 aa8.42□□□□□ -1.06
PRKCB-203ENST00000463752 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
PRKCB-203ENST00000463752 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
PRKCB-203ENST00000463752 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
PRKCB-203ENST00000463752 PPIP5K1Q6PFW1 1433 aa8.41□□□□□ -1.06
PRKCB-203ENST00000463752 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
PRKCB-203ENST00000463752 CABLES1Q8TDN4 633 aa8.41□□□□□ -1.06
PRKCB-203ENST00000463752 SBNO2Q9Y2G9 1366 aa8.4□□□□□ -1.06
PRKCB-203ENST00000463752 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.06
PRKCB-203ENST00000463752 SIN3AQ96ST3 1273 aa8.4□□□□□ -1.06
PRKCB-203ENST00000463752 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
PRKCB-203ENST00000463752 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
PRKCB-203ENST00000463752 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.07
PRKCB-203ENST00000463752 EVA1CP58658 441 aa8.39□□□□□ -1.07
PRKCB-203ENST00000463752 PUS7Q96PZ0 661 aaKnown RBP8.39□□□□□ -1.07
PRKCB-203ENST00000463752 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
PRKCB-203ENST00000463752 PHRF1Q9P1Y6 1649 aaKnown RBP8.39□□□□□ -1.07
PRKCB-203ENST00000463752 GLI3P10071 1580 aa8.39□□□□□ -1.07
PRKCB-203ENST00000463752 CPDO75976 1380 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 NRAPQ86VF7 1730 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 CLSPNQ9HAW4 1339 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 A0A0G2JS52 829 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 MYT1Q01538 1121 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 KRT27Q7Z3Y8 459 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
PRKCB-203ENST00000463752 THRAP3Q9Y2W1 955 aaKnown RBP8.38□□□□□ -1.07
PRKCB-203ENST00000463752 BLMP54132 1417 aaPredicted RBP8.37□□□□□ -1.07
PRKCB-203ENST00000463752 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
PRKCB-203ENST00000463752 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
PRKCB-203ENST00000463752 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
PRKCB-203ENST00000463752 USP6P35125 1406 aa8.37□□□□□ -1.07
PRKCB-203ENST00000463752 KIAA0232Q92628 1395 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 USP19O94966 1318 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 SPATA31A5Q5VU36 1347 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 SPATA31A7Q8IWB4 1347 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 GCP02774 474 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 NLRP6P59044 892 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 TERF2IPQ9NYB0 399 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 BRWD3Q6RI45 1802 aa8.36□□□□□ -1.07
PRKCB-203ENST00000463752 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
PRKCB-203ENST00000463752 AKAP12Q02952 1782 aa8.35□□□□□ -1.07
PRKCB-203ENST00000463752 ZC3H6P61129 1189 aaKnown RBP8.35□□□□□ -1.07
PRKCB-203ENST00000463752 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
PRKCB-203ENST00000463752 HDGFL2Q7Z4V5 671 aaPredicted RBP8.35□□□□□ -1.07
PRKCB-203ENST00000463752 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
PRKCB-203ENST00000463752 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
PRKCB-203ENST00000463752 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
PRKCB-203ENST00000463752 BAG6P46379 1132 aa8.34□□□□□ -1.07
PRKCB-203ENST00000463752 PDE3BQ13370 1112 aa8.34□□□□□ -1.07
PRKCB-203ENST00000463752 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
PRKCB-203ENST00000463752 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
PRKCB-203ENST00000463752 RGPD1P0DJD0 1748 aa8.34□□□□□ -1.07
PRKCB-203ENST00000463752 AATKQ6ZMQ8 1374 aa8.34□□□□□ -1.07
PRKCB-203ENST00000463752 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
PRKCB-203ENST00000463752 NUTM2GQ5VZR2 741 aa8.33□□□□□ -1.08
PRKCB-203ENST00000463752 FAM196AQ6ZSG2 479 aa8.33□□□□□ -1.08
PRKCB-203ENST00000463752 TCP11L2Q8N4U5 519 aa8.33□□□□□ -1.08
PRKCB-203ENST00000463752 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
PRKCB-203ENST00000463752 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
PRKCB-203ENST00000463752 SLIT3O75094 1523 aa8.33□□□□□ -1.08
PRKCB-203ENST00000463752 ABCC6O95255 1503 aa8.33□□□□□ -1.08
PRKCB-203ENST00000463752 CRB1P82279 1406 aa8.32□□□□□ -1.08
PRKCB-203ENST00000463752 SSH2Q76I76 1423 aa8.32□□□□□ -1.08
PRKCB-203ENST00000463752 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
PRKCB-203ENST00000463752 LMO7Q8WWI1 1683 aa8.32□□□□□ -1.08
PRKCB-203ENST00000463752 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
PRKCB-203ENST00000463752 MON2Q7Z3U7 1717 aa8.32□□□□□ -1.08
PRKCB-203ENST00000463752 TTC21BQ7Z4L5 1316 aa8.31□□□□□ -1.08
PRKCB-203ENST00000463752 TMC1Q8TDI8 760 aa8.31□□□□□ -1.08
PRKCB-203ENST00000463752 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
PRKCB-203ENST00000463752 PIK3C2AO00443 1686 aa8.3□□□□□ -1.08
PRKCB-203ENST00000463752 CAMTA1Q9Y6Y1 1673 aa8.3□□□□□ -1.08
PRKCB-203ENST00000463752 EDC4Q6P2E9 1401 aaKnown RBP8.3□□□□□ -1.08
PRKCB-203ENST00000463752 TMF1P82094 1093 aa8.3□□□□□ -1.08
PRKCB-203ENST00000463752 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
PRKCB-203ENST00000463752 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
PRKCB-203ENST00000463752 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
PRKCB-203ENST00000463752 TOM1L2Q6ZVM7 507 aa8.29□□□□□ -1.08
PRKCB-203ENST00000463752 USP35Q9P2H5 1018 aa8.29□□□□□ -1.08
PRKCB-203ENST00000463752 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
PRKCB-203ENST00000463752 DISP2A7MBM2 1401 aa8.29□□□□□ -1.08
PRKCB-203ENST00000463752 WDR17Q8IZU2 1322 aa8.29□□□□□ -1.08
PRKCB-203ENST00000463752 CCDC7Q96M83 1385 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms