RNA–Protein interactions for RNA: ENST00000463728.1

LRP11-203, Transcript of LDL receptor related protein 11, humanhuman

TSL 2

Gene LRP11, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-203ENST00000463728 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
LRP11-203ENST00000463728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
LRP11-203ENST00000463728 POLR3AO14802 1390 aaPredicted RBP12.29□□□□□ -0.44
LRP11-203ENST00000463728 USP6P35125 1406 aa12.28□□□□□ -0.44
LRP11-203ENST00000463728 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
LRP11-203ENST00000463728 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
LRP11-203ENST00000463728 XPCQ01831 940 aaPredicted RBP12.27□□□□□ -0.45
LRP11-203ENST00000463728 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
LRP11-203ENST00000463728 FOXO3O43524 673 aa12.26□□□□□ -0.45
LRP11-203ENST00000463728 NME9Q86XW9 330 aa12.26□□□□□ -0.45
LRP11-203ENST00000463728 DDX17Q92841 729 aaKnown RBP12.26□□□□□ -0.45
LRP11-203ENST00000463728 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
LRP11-203ENST00000463728 BRINP3Q76B58 766 aa12.25□□□□□ -0.45
LRP11-203ENST00000463728 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
LRP11-203ENST00000463728 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
LRP11-203ENST00000463728 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
LRP11-203ENST00000463728 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
LRP11-203ENST00000463728 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
LRP11-203ENST00000463728 TTC21BQ7Z4L5 1316 aa12.25□□□□□ -0.45
LRP11-203ENST00000463728 PIK3C2AO00443 1686 aa12.24□□□□□ -0.45
LRP11-203ENST00000463728 SSH2Q76I76 1423 aa12.24□□□□□ -0.45
LRP11-203ENST00000463728 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
LRP11-203ENST00000463728 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
LRP11-203ENST00000463728 PARD3Q8TEW0 1356 aa12.23□□□□□ -0.45
LRP11-203ENST00000463728 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
LRP11-203ENST00000463728 FYB1O15117 783 aa12.23□□□□□ -0.45
LRP11-203ENST00000463728 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
LRP11-203ENST00000463728 PSME1Q06323 249 aa12.23□□□□□ -0.45
LRP11-203ENST00000463728 C1QBPQ07021 282 aaKnown RBP12.23□□□□□ -0.45
LRP11-203ENST00000463728 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
LRP11-203ENST00000463728 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
LRP11-203ENST00000463728 CERKQ8TCT0 537 aa12.22□□□□□ -0.45
LRP11-203ENST00000463728 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
LRP11-203ENST00000463728 NSD2O96028 1365 aa12.21□□□□□ -0.45
LRP11-203ENST00000463728 MARF1Q9Y4F3 1742 aaKnown RBP12.21□□□□□ -0.45
LRP11-203ENST00000463728 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.45
LRP11-203ENST00000463728 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
LRP11-203ENST00000463728 NHSL1Q5SYE7 1610 aa12.21□□□□□ -0.46
LRP11-203ENST00000463728 PXDNQ92626 1479 aa12.21□□□□□ -0.46
LRP11-203ENST00000463728 TTC21AQ8NDW8 1320 aa12.2□□□□□ -0.46
LRP11-203ENST00000463728 UBAP1LF5GYI3 381 aa12.2□□□□□ -0.46
LRP11-203ENST00000463728 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
LRP11-203ENST00000463728 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
LRP11-203ENST00000463728 RALBP1Q15311 655 aa12.2□□□□□ -0.46
LRP11-203ENST00000463728 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
LRP11-203ENST00000463728 NPHP3Q7Z494 1330 aa12.19□□□□□ -0.46
LRP11-203ENST00000463728 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
LRP11-203ENST00000463728 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
LRP11-203ENST00000463728 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
LRP11-203ENST00000463728 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
LRP11-203ENST00000463728 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
LRP11-203ENST00000463728 PPP2R1AP30153 589 aa12.18□□□□□ -0.46
LRP11-203ENST00000463728 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
LRP11-203ENST00000463728 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
LRP11-203ENST00000463728 SOX12O15370 315 aa12.17□□□□□ -0.46
LRP11-203ENST00000463728 TOM1O60784 492 aa12.17□□□□□ -0.46
LRP11-203ENST00000463728 FBLN1P23142 703 aa12.17□□□□□ -0.46
LRP11-203ENST00000463728 ABTB2Q8N961 1025 aa12.17□□□□□ -0.46
LRP11-203ENST00000463728 COG3Q96JB2 828 aa12.17□□□□□ -0.46
LRP11-203ENST00000463728 BRD4O60885 1362 aaPredicted RBP12.17□□□□□ -0.46
LRP11-203ENST00000463728 NLRP6P59044 892 aa12.16□□□□□ -0.46
LRP11-203ENST00000463728 TNS3Q68CZ2 1445 aa12.16□□□□□ -0.46
LRP11-203ENST00000463728 SBNO1A3KN83 1393 aa12.16□□□□□ -0.46
LRP11-203ENST00000463728 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
LRP11-203ENST00000463728 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.46
LRP11-203ENST00000463728 PHLPP1O60346 1717 aa12.15□□□□□ -0.46
LRP11-203ENST00000463728 SOS2Q07890 1332 aaPredicted RBP12.14□□□□□ -0.47
LRP11-203ENST00000463728 SPATA31A3Q5VYP0 1347 aa12.14□□□□□ -0.47
LRP11-203ENST00000463728 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
LRP11-203ENST00000463728 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
LRP11-203ENST00000463728 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
LRP11-203ENST00000463728 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
LRP11-203ENST00000463728 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
LRP11-203ENST00000463728 PHRF1Q9P1Y6 1649 aaKnown RBP12.13□□□□□ -0.47
LRP11-203ENST00000463728 CRYBG1Q9Y4K1 1723 aa12.13□□□□□ -0.47
LRP11-203ENST00000463728 COL16A1Q07092 1604 aaPredicted RBP12.12□□□□□ -0.47
LRP11-203ENST00000463728 MTHFSP49914 203 aa12.12□□□□□ -0.47
LRP11-203ENST00000463728 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
LRP11-203ENST00000463728 SLIT3O75094 1523 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 NFAT5O94916 1531 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
LRP11-203ENST00000463728 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 USP19O94966 1318 aa12.11□□□□□ -0.47
LRP11-203ENST00000463728 LTN1O94822 1766 aa12.1□□□□□ -0.47
LRP11-203ENST00000463728 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
LRP11-203ENST00000463728 ZBTB7CA1YPR0 619 aa12.1□□□□□ -0.47
LRP11-203ENST00000463728 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
LRP11-203ENST00000463728 AATKQ6ZMQ8 1374 aa12.09□□□□□ -0.47
LRP11-203ENST00000463728 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
LRP11-203ENST00000463728 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
LRP11-203ENST00000463728 MAP3K19Q56UN5 1328 aa12.09□□□□□ -0.47
LRP11-203ENST00000463728 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
LRP11-203ENST00000463728 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
LRP11-203ENST00000463728 GCP02774 474 aa12.07□□□□□ -0.48
LRP11-203ENST00000463728 FAM9BQ8IZU0 186 aa12.07□□□□□ -0.48
LRP11-203ENST00000463728 PNPLA6Q8IY17 1366 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms