RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 CCDC61Q9Y6R9 512 aa26.6■■□□□ 1.85
GCOM1-204ENST00000463717 PNPLA6Q8IY17 1366 aa26.6■■□□□ 1.85
GCOM1-204ENST00000463717 PTPRUQ92729 1446 aa26.6■■□□□ 1.85
GCOM1-204ENST00000463717 CCDC27Q2M243 656 aa26.6■■□□□ 1.85
GCOM1-204ENST00000463717 PIK3R4Q99570 1358 aa26.58■■□□□ 1.85
GCOM1-204ENST00000463717 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.57■■□□□ 1.84
GCOM1-204ENST00000463717 PHF23Q9BUL5 403 aaPredicted RBP26.57■■□□□ 1.84
GCOM1-204ENST00000463717 CDK12Q9NYV4 1490 aaPredicted RBP26.56■■□□□ 1.84
GCOM1-204ENST00000463717 WWC1Q8IX03 1113 aa26.55■■□□□ 1.84
GCOM1-204ENST00000463717 ZNF692Q9BU19 519 aaPredicted RBP26.55■■□□□ 1.84
GCOM1-204ENST00000463717 AATKQ6ZMQ8 1374 aa26.55■■□□□ 1.84
GCOM1-204ENST00000463717 U2AF1L5P0DN76 240 aaPredicted RBP26.54■■□□□ 1.84
GCOM1-204ENST00000463717 U2AF1Q01081 240 aaKnown RBP eCLIP26.54■■□□□ 1.84
GCOM1-204ENST00000463717 TCP11L2Q8N4U5 519 aa26.54■■□□□ 1.84
GCOM1-204ENST00000463717 SETD1BQ9UPS6 1966 aaKnown RBP26.54■■□□□ 1.84
GCOM1-204ENST00000463717 NALCNQ8IZF0 1738 aa26.54■■□□□ 1.84
GCOM1-204ENST00000463717 WDR63Q8IWG1 891 aa26.54■■□□□ 1.84
GCOM1-204ENST00000463717 PNNQ9H307 717 aaKnown RBP26.53■■□□□ 1.84
GCOM1-204ENST00000463717 PRR36Q9H6K5 1346 aa26.51■■□□□ 1.83
GCOM1-204ENST00000463717 DIAPH1O60610 1272 aaKnown RBP26.5■■□□□ 1.83
GCOM1-204ENST00000463717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.5■■□□□ 1.83
GCOM1-204ENST00000463717 EXOC6Q8TAG9 804 aa26.5■■□□□ 1.83
GCOM1-204ENST00000463717 SLC26A8Q96RN1 970 aa26.49■■□□□ 1.83
GCOM1-204ENST00000463717 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
GCOM1-204ENST00000463717 CHD2O14647 1828 aaKnown RBP26.48■■□□□ 1.83
GCOM1-204ENST00000463717 FMN2Q9NZ56 1722 aa26.48■■□□□ 1.83
GCOM1-204ENST00000463717 AMOTL2Q9Y2J4 779 aa26.47■■□□□ 1.83
GCOM1-204ENST00000463717 PLEKHG3A1L390 1219 aa26.47■■□□□ 1.83
GCOM1-204ENST00000463717 MAPK8IP3Q9UPT6 1336 aa26.46■■□□□ 1.83
GCOM1-204ENST00000463717 ANKARQ7Z5J8 1434 aa26.46■■□□□ 1.83
GCOM1-204ENST00000463717 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
GCOM1-204ENST00000463717 USP6P35125 1406 aa26.45■■□□□ 1.83
GCOM1-204ENST00000463717 COG3Q96JB2 828 aa26.45■■□□□ 1.82
GCOM1-204ENST00000463717 U2SURPO15042 1029 aaKnown RBP26.44■■□□□ 1.82
GCOM1-204ENST00000463717 PLPPR3Q6T4P5 718 aa26.44■■□□□ 1.82
GCOM1-204ENST00000463717 PLEKHF1Q96S99 279 aa26.44■■□□□ 1.82
GCOM1-204ENST00000463717 POLKQ9UBT6 870 aa26.43■■□□□ 1.82
GCOM1-204ENST00000463717 RGPD8O14715 1765 aaPredicted RBP26.43■■□□□ 1.82
GCOM1-204ENST00000463717 NME9Q86XW9 330 aa26.42■■□□□ 1.82
GCOM1-204ENST00000463717 OVOS2A0A0J9YW53 1432 aa26.42■■□□□ 1.82
GCOM1-204ENST00000463717 OVOS2Q6IE36 1432 aa26.42■■□□□ 1.82
GCOM1-204ENST00000463717 MYH16Q9H6N6 1097 aa26.41■■□□□ 1.82
GCOM1-204ENST00000463717 DMRT2Q9Y5R5 561 aa26.41■■□□□ 1.82
GCOM1-204ENST00000463717 PLIN1O60240 522 aa26.41■■□□□ 1.82
GCOM1-204ENST00000463717 CRBNQ96SW2 442 aa26.41■■□□□ 1.82
GCOM1-204ENST00000463717 RRP7AQ9Y3A4 280 aaKnown RBP26.41■■□□□ 1.82
GCOM1-204ENST00000463717 USP54Q70EL1 1684 aa26.4■■□□□ 1.82
GCOM1-204ENST00000463717 FCHSD2O94868 740 aa26.38■■□□□ 1.81
GCOM1-204ENST00000463717 NEUROD2Q15784 382 aa26.38■■□□□ 1.81
GCOM1-204ENST00000463717 ACEP12821 1306 aa26.38■■□□□ 1.81
GCOM1-204ENST00000463717 IL16Q14005 1332 aa26.38■■□□□ 1.81
GCOM1-204ENST00000463717 TTC21BQ7Z4L5 1316 aa26.38■■□□□ 1.81
GCOM1-204ENST00000463717 SSH2Q76I76 1423 aa26.37■■□□□ 1.81
GCOM1-204ENST00000463717 TTC21AQ8NDW8 1320 aa26.37■■□□□ 1.81
GCOM1-204ENST00000463717 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
GCOM1-204ENST00000463717 TMPOP42166 694 aaKnown RBP26.37■■□□□ 1.81
GCOM1-204ENST00000463717 RBM19Q9Y4C8 960 aaKnown RBP26.37■■□□□ 1.81
GCOM1-204ENST00000463717 NEFMP07197 916 aa26.35■■□□□ 1.81
GCOM1-204ENST00000463717 CT47B1P0C2W7 299 aaPredicted RBP26.35■■□□□ 1.81
GCOM1-204ENST00000463717 ANKLE2Q86XL3 938 aa26.34■■□□□ 1.81
GCOM1-204ENST00000463717 USP31Q70CQ4 1352 aa26.33■■□□□ 1.81
GCOM1-204ENST00000463717 RSPH6AQ9H0K4 717 aa26.32■■□□□ 1.8
GCOM1-204ENST00000463717 PIK3C2AO00443 1686 aa26.31■■□□□ 1.8
GCOM1-204ENST00000463717 EMILIN1Q9Y6C2 1016 aa26.31■■□□□ 1.8
GCOM1-204ENST00000463717 PDE3AQ14432 1141 aa26.3■■□□□ 1.8
GCOM1-204ENST00000463717 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
GCOM1-204ENST00000463717 DLG5Q8TDM6 1919 aa26.29■■□□□ 1.8
GCOM1-204ENST00000463717 PPM1GO15355 546 aaPredicted RBP26.29■■□□□ 1.8
GCOM1-204ENST00000463717 IL13P35225 146 aa26.29■■□□□ 1.8
GCOM1-204ENST00000463717 C20orf194Q5TEA3 1177 aa26.29■■□□□ 1.8
GCOM1-204ENST00000463717 RGPD1P0DJD0 1748 aa26.29■■□□□ 1.8
GCOM1-204ENST00000463717 NWD1Q149M9 1564 aa26.29■■□□□ 1.8
GCOM1-204ENST00000463717 PEAK1Q9H792 1746 aa26.28■■□□□ 1.8
GCOM1-204ENST00000463717 KCNA6P17658 529 aa26.28■■□□□ 1.8
GCOM1-204ENST00000463717 ZRANB1Q9UGI0 708 aa26.28■■□□□ 1.8
GCOM1-204ENST00000463717 TRIM35Q9UPQ4 493 aa26.27■■□□□ 1.8
GCOM1-204ENST00000463717 BCAR3O75815 825 aa26.25■■□□□ 1.79
GCOM1-204ENST00000463717 PRKAR2BP31323 418 aa26.25■■□□□ 1.79
GCOM1-204ENST00000463717 RARSP54136 660 aaKnown RBP26.25■■□□□ 1.79
GCOM1-204ENST00000463717 NPHP4O75161 1426 aaPredicted RBP26.25■■□□□ 1.79
GCOM1-204ENST00000463717 MARF1Q9Y4F3 1742 aaKnown RBP26.25■■□□□ 1.79
GCOM1-204ENST00000463717 RIPK4P57078 832 aa26.25■■□□□ 1.79
GCOM1-204ENST00000463717 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
GCOM1-204ENST00000463717 CANXP27824 592 aaKnown RBP26.23■■□□□ 1.79
GCOM1-204ENST00000463717 CALD1Q05682 793 aaKnown RBP26.23■■□□□ 1.79
GCOM1-204ENST00000463717 ADGRL3Q9HAR2 1447 aa26.23■■□□□ 1.79
GCOM1-204ENST00000463717 AAMPQ13685 434 aa26.22■■□□□ 1.79
GCOM1-204ENST00000463717 NFE2L2Q16236 605 aa26.22■■□□□ 1.79
GCOM1-204ENST00000463717 NUTM2FA1L443 756 aa26.21■■□□□ 1.79
GCOM1-204ENST00000463717 TCERG1O14776 1098 aaKnown RBP26.21■■□□□ 1.79
GCOM1-204ENST00000463717 CENPQQ7L2Z9 268 aaPredicted RBP26.21■■□□□ 1.79
GCOM1-204ENST00000463717 NGDNQ8NEJ9 315 aaKnown RBP26.21■■□□□ 1.79
GCOM1-204ENST00000463717 FBLN1P23142 703 aa26.2■■□□□ 1.78
GCOM1-204ENST00000463717 LMOD3Q0VAK6 560 aa26.2■■□□□ 1.78
GCOM1-204ENST00000463717 RRS1Q15050 365 aaKnown RBP26.2■■□□□ 1.78
GCOM1-204ENST00000463717 KDM2BQ8NHM5 1336 aa26.19■■□□□ 1.78
GCOM1-204ENST00000463717 SBNO1A3KN83 1393 aa26.17■■□□□ 1.78
GCOM1-204ENST00000463717 KIF24Q5T7B8 1368 aa26.17■■□□□ 1.78
GCOM1-204ENST00000463717 MS4A1P11836 297 aa26.15■■□□□ 1.78
GCOM1-204ENST00000463717 PMFBP1Q8TBY8 1022 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms