RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
CCDC78-206ENST00000463539 SSH2Q76I76 1423 aa25.43■■□□□ 1.66
CCDC78-206ENST00000463539 COG3Q96JB2 828 aa25.43■■□□□ 1.66
CCDC78-206ENST00000463539 PHF8Q9UPP1 1060 aa25.43■■□□□ 1.66
CCDC78-206ENST00000463539 CFAP53Q96M91 514 aa25.42■■□□□ 1.66
CCDC78-206ENST00000463539 ZBED9Q6R2W3 1325 aa25.42■■□□□ 1.66
CCDC78-206ENST00000463539 SCAF1Q9H7N4 1312 aaKnown RBP25.41■■□□□ 1.66
CCDC78-206ENST00000463539 TTC21AQ8NDW8 1320 aa25.41■■□□□ 1.66
CCDC78-206ENST00000463539 ESCO1Q5FWF5 840 aa25.4■■□□□ 1.66
CCDC78-206ENST00000463539 ADAMTS8Q9UP79 889 aa25.4■■□□□ 1.66
CCDC78-206ENST00000463539 DCCP43146 1447 aa25.4■■□□□ 1.66
CCDC78-206ENST00000463539 BLMP54132 1417 aaPredicted RBP25.4■■□□□ 1.66
CCDC78-206ENST00000463539 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
CCDC78-206ENST00000463539 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
CCDC78-206ENST00000463539 ZNF335Q9H4Z2 1342 aaPredicted RBP25.38■■□□□ 1.65
CCDC78-206ENST00000463539 ATF3P18847 181 aa25.37■■□□□ 1.65
CCDC78-206ENST00000463539 OVOS2A0A0J9YW53 1432 aa25.36■■□□□ 1.65
CCDC78-206ENST00000463539 OVOS2Q6IE36 1432 aa25.36■■□□□ 1.65
CCDC78-206ENST00000463539 C1orf167Q5SNV9 1468 aa25.35■■□□□ 1.65
CCDC78-206ENST00000463539 MSH6P52701 1360 aa25.34■■□□□ 1.65
CCDC78-206ENST00000463539 AATKQ6ZMQ8 1374 aa25.34■■□□□ 1.65
CCDC78-206ENST00000463539 LRRC7Q96NW7 1537 aa25.33■■□□□ 1.64
CCDC78-206ENST00000463539 CADPS2Q86UW7 1296 aa25.33■■□□□ 1.64
CCDC78-206ENST00000463539 ORAI2Q96SN7 254 aa25.33■■□□□ 1.64
CCDC78-206ENST00000463539 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
CCDC78-206ENST00000463539 MST1RQ04912 1400 aa25.32■■□□□ 1.64
CCDC78-206ENST00000463539 USP31Q70CQ4 1352 aa25.3■■□□□ 1.64
CCDC78-206ENST00000463539 SENP3-EIF4A1A0A087X0R7 540 aa25.3■■□□□ 1.64
CCDC78-206ENST00000463539 FBLN1P23142 703 aa25.3■■□□□ 1.64
CCDC78-206ENST00000463539 PSME1Q06323 249 aa25.3■■□□□ 1.64
CCDC78-206ENST00000463539 SHPRHQ149N8 1683 aa25.3■■□□□ 1.64
CCDC78-206ENST00000463539 COL3A1P02461 1466 aaPredicted RBP25.29■■□□□ 1.64
CCDC78-206ENST00000463539 SMG6Q86US8 1419 aaKnown RBP25.29■■□□□ 1.64
CCDC78-206ENST00000463539 PNPLA6Q8IY17 1366 aa25.29■■□□□ 1.64
CCDC78-206ENST00000463539 PAK3O75914 559 aaPredicted RBP25.28■■□□□ 1.64
CCDC78-206ENST00000463539 PPM1GO15355 546 aaPredicted RBP25.28■■□□□ 1.64
CCDC78-206ENST00000463539 PIK3C2AO00443 1686 aa25.28■■□□□ 1.64
CCDC78-206ENST00000463539 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
CCDC78-206ENST00000463539 KIF1AQ12756 1690 aa25.27■■□□□ 1.64
CCDC78-206ENST00000463539 FOXO3O43524 673 aa25.26■■□□□ 1.63
CCDC78-206ENST00000463539 ABTB2Q8N961 1025 aa25.26■■□□□ 1.63
CCDC78-206ENST00000463539 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
CCDC78-206ENST00000463539 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
CCDC78-206ENST00000463539 NLRP6P59044 892 aa25.25■■□□□ 1.63
CCDC78-206ENST00000463539 DIAPH1O60610 1272 aaKnown RBP25.24■■□□□ 1.63
CCDC78-206ENST00000463539 RRS1Q15050 365 aaKnown RBP25.24■■□□□ 1.63
CCDC78-206ENST00000463539 CCDC146Q8IYE0 955 aa25.23■■□□□ 1.63
CCDC78-206ENST00000463539 XIRP1Q702N8 1843 aaKnown RBP25.23■■□□□ 1.63
CCDC78-206ENST00000463539 U2AF1L5P0DN76 240 aaPredicted RBP25.22■■□□□ 1.63
CCDC78-206ENST00000463539 U2AF1Q01081 240 aaKnown RBP eCLIP25.22■■□□□ 1.63
CCDC78-206ENST00000463539 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
CCDC78-206ENST00000463539 U2SURPO15042 1029 aaKnown RBP25.2■■□□□ 1.62
CCDC78-206ENST00000463539 SOX12O15370 315 aa25.2■■□□□ 1.62
CCDC78-206ENST00000463539 NUTM2GQ5VZR2 741 aa25.2■■□□□ 1.62
CCDC78-206ENST00000463539 XPCQ01831 940 aaPredicted RBP25.19■■□□□ 1.62
CCDC78-206ENST00000463539 USP54Q70EL1 1684 aa25.19■■□□□ 1.62
CCDC78-206ENST00000463539 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
CCDC78-206ENST00000463539 MAP2P11137 1827 aaKnown RBP25.18■■□□□ 1.62
CCDC78-206ENST00000463539 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
CCDC78-206ENST00000463539 RUNDC1Q96C34 613 aa25.16■■□□□ 1.62
CCDC78-206ENST00000463539 APAF1O14727 1248 aa25.16■■□□□ 1.62
CCDC78-206ENST00000463539 MAP3K19Q56UN5 1328 aa25.14■■□□□ 1.62
CCDC78-206ENST00000463539 PDE3BQ13370 1112 aa25.14■■□□□ 1.61
CCDC78-206ENST00000463539 NPHP3Q7Z494 1330 aa25.14■■□□□ 1.61
CCDC78-206ENST00000463539 IL13P35225 146 aa25.13■■□□□ 1.61
CCDC78-206ENST00000463539 MARF1Q9Y4F3 1742 aaKnown RBP25.13■■□□□ 1.61
CCDC78-206ENST00000463539 SLAIN2Q9P270 581 aa25.12■■□□□ 1.61
CCDC78-206ENST00000463539 TRPM3Q9HCF6 1732 aaPredicted RBP25.12■■□□□ 1.61
CCDC78-206ENST00000463539 SBNO1A3KN83 1393 aa25.12■■□□□ 1.61
CCDC78-206ENST00000463539 NGEFQ8N5V2 710 aa25.12■■□□□ 1.61
CCDC78-206ENST00000463539 FLT4P35916 1363 aa25.11■■□□□ 1.61
CCDC78-206ENST00000463539 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
CCDC78-206ENST00000463539 GTF3C3Q9Y5Q9 886 aa25.11■■□□□ 1.61
CCDC78-206ENST00000463539 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
CCDC78-206ENST00000463539 IQSEC2Q5JU85 1478 aa25.1■■□□□ 1.61
CCDC78-206ENST00000463539 PEAK1Q9H792 1746 aa25.1■■□□□ 1.61
CCDC78-206ENST00000463539 DDX17Q92841 729 aaKnown RBP25.09■■□□□ 1.61
CCDC78-206ENST00000463539 PNNQ9H307 717 aaKnown RBP25.09■■□□□ 1.61
CCDC78-206ENST00000463539 KIF24Q5T7B8 1368 aa25.08■■□□□ 1.61
CCDC78-206ENST00000463539 AMPHP49418 695 aa25.08■■□□□ 1.61
CCDC78-206ENST00000463539 TCP11L2Q8N4U5 519 aa25.08■■□□□ 1.61
CCDC78-206ENST00000463539 KCNH5Q8NCM2 988 aa25.08■■□□□ 1.61
CCDC78-206ENST00000463539 HSP90AB2PQ58FF8 381 aa25.07■■□□□ 1.6
CCDC78-206ENST00000463539 FCHSD2O94868 740 aa25.07■■□□□ 1.6
CCDC78-206ENST00000463539 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
CCDC78-206ENST00000463539 ZNF521Q96K83 1311 aa25.06■■□□□ 1.6
CCDC78-206ENST00000463539 MAPK8IP3Q9UPT6 1336 aa25.06■■□□□ 1.6
CCDC78-206ENST00000463539 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
CCDC78-206ENST00000463539 PXDNQ92626 1479 aa25.06■■□□□ 1.6
CCDC78-206ENST00000463539 NFAT5O94916 1531 aa25.05■■□□□ 1.6
CCDC78-206ENST00000463539 USP19O94966 1318 aa25.05■■□□□ 1.6
CCDC78-206ENST00000463539 SLIT3O75094 1523 aa25.04■■□□□ 1.6
CCDC78-206ENST00000463539 RSPH6AQ9H0K4 717 aa25.04■■□□□ 1.6
CCDC78-206ENST00000463539 RTL1A6NKG5 1358 aa25.04■■□□□ 1.6
CCDC78-206ENST00000463539 TNS3Q68CZ2 1445 aa25.03■■□□□ 1.6
CCDC78-206ENST00000463539 LTBP4Q8N2S1 1624 aa25.03■■□□□ 1.6
CCDC78-206ENST00000463539 ALS2Q96Q42 1657 aa25.03■■□□□ 1.6
CCDC78-206ENST00000463539 HMOX1P09601 288 aa25.02■■□□□ 1.6
CCDC78-206ENST00000463539 CDCA7LQ96GN5 454 aa25.02■■□□□ 1.6
CCDC78-206ENST00000463539 RRP7AQ9Y3A4 280 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms