RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
LINC00879-202ENST00000463200 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
LINC00879-202ENST00000463200 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
LINC00879-202ENST00000463200 ABCA3Q99758 1704 aa17.22■□□□□ 0.35
LINC00879-202ENST00000463200 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
LINC00879-202ENST00000463200 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
LINC00879-202ENST00000463200 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
LINC00879-202ENST00000463200 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
LINC00879-202ENST00000463200 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
LINC00879-202ENST00000463200 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
LINC00879-202ENST00000463200 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
LINC00879-202ENST00000463200 NWD2Q9ULI1 1742 aa17.19■□□□□ 0.34
LINC00879-202ENST00000463200 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
LINC00879-202ENST00000463200 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
LINC00879-202ENST00000463200 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
LINC00879-202ENST00000463200 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
LINC00879-202ENST00000463200 ATRNO75882 1429 aa17.19■□□□□ 0.34
LINC00879-202ENST00000463200 PLCH1Q4KWH8 1693 aa17.18■□□□□ 0.34
LINC00879-202ENST00000463200 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
LINC00879-202ENST00000463200 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
LINC00879-202ENST00000463200 GJD4Q96KN9 370 aaPredicted RBP17.17■□□□□ 0.34
LINC00879-202ENST00000463200 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
LINC00879-202ENST00000463200 BCL9LQ86UU0 1499 aa17.17■□□□□ 0.34
LINC00879-202ENST00000463200 SLIT2O94813 1529 aa17.16■□□□□ 0.34
LINC00879-202ENST00000463200 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
LINC00879-202ENST00000463200 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
LINC00879-202ENST00000463200 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
LINC00879-202ENST00000463200 RGS12O14924 1447 aa17.15■□□□□ 0.34
LINC00879-202ENST00000463200 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
LINC00879-202ENST00000463200 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
LINC00879-202ENST00000463200 BTG4Q9NY30 223 aa17.13■□□□□ 0.33
LINC00879-202ENST00000463200 PHRF1Q9P1Y6 1649 aaKnown RBP17.13■□□□□ 0.33
LINC00879-202ENST00000463200 ADRA2BP18089 450 aa17.12■□□□□ 0.33
LINC00879-202ENST00000463200 VPS72Q15906 364 aa17.12■□□□□ 0.33
LINC00879-202ENST00000463200 TMC1Q8TDI8 760 aa17.12■□□□□ 0.33
LINC00879-202ENST00000463200 CRYBG1Q9Y4K1 1723 aa17.12■□□□□ 0.33
LINC00879-202ENST00000463200 USP6P35125 1406 aa17.12■□□□□ 0.33
LINC00879-202ENST00000463200 A0A0G2JS52 829 aa17.11■□□□□ 0.33
LINC00879-202ENST00000463200 MYT1Q01538 1121 aa17.11■□□□□ 0.33
LINC00879-202ENST00000463200 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
LINC00879-202ENST00000463200 AKAP12Q02952 1782 aa17.1■□□□□ 0.33
LINC00879-202ENST00000463200 NLRP6P59044 892 aa17.1■□□□□ 0.33
LINC00879-202ENST00000463200 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
LINC00879-202ENST00000463200 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
LINC00879-202ENST00000463200 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
LINC00879-202ENST00000463200 EVA1CP58658 441 aa17.09■□□□□ 0.33
LINC00879-202ENST00000463200 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
LINC00879-202ENST00000463200 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
LINC00879-202ENST00000463200 PUS7Q96PZ0 661 aaKnown RBP17.08■□□□□ 0.32
LINC00879-202ENST00000463200 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.32
LINC00879-202ENST00000463200 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
LINC00879-202ENST00000463200 TMF1P82094 1093 aa17.07■□□□□ 0.32
LINC00879-202ENST00000463200 UPF1Q92900 1129 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC00879-202ENST00000463200 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
LINC00879-202ENST00000463200 USP47Q96K76 1375 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 GCP02774 474 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 GLI3P10071 1580 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
LINC00879-202ENST00000463200 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
LINC00879-202ENST00000463200 USP19O94966 1318 aa17.05■□□□□ 0.32
LINC00879-202ENST00000463200 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
LINC00879-202ENST00000463200 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
LINC00879-202ENST00000463200 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
LINC00879-202ENST00000463200 CPDO75976 1380 aa17.03■□□□□ 0.32
LINC00879-202ENST00000463200 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
LINC00879-202ENST00000463200 CPSF1Q10570 1443 aaKnown RBP17.03■□□□□ 0.32
LINC00879-202ENST00000463200 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
LINC00879-202ENST00000463200 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC00879-202ENST00000463200 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
LINC00879-202ENST00000463200 CCDC125Q86Z20 511 aa17.01■□□□□ 0.31
LINC00879-202ENST00000463200 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
LINC00879-202ENST00000463200 SSH2Q76I76 1423 aa17.01■□□□□ 0.31
LINC00879-202ENST00000463200 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
LINC00879-202ENST00000463200 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
LINC00879-202ENST00000463200 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
LINC00879-202ENST00000463200 TESK2Q96S53 571 aa17■□□□□ 0.31
LINC00879-202ENST00000463200 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
LINC00879-202ENST00000463200 SLIT3O75094 1523 aa17■□□□□ 0.31
LINC00879-202ENST00000463200 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
LINC00879-202ENST00000463200 SOX12O15370 315 aa16.99■□□□□ 0.31
LINC00879-202ENST00000463200 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
LINC00879-202ENST00000463200 KRT27Q7Z3Y8 459 aa16.99■□□□□ 0.31
LINC00879-202ENST00000463200 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
LINC00879-202ENST00000463200 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
LINC00879-202ENST00000463200 A0A1W2PP64 1363 aa16.96■□□□□ 0.31
LINC00879-202ENST00000463200 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
LINC00879-202ENST00000463200 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
LINC00879-202ENST00000463200 CAMTA1Q9Y6Y1 1673 aa16.95■□□□□ 0.3
LINC00879-202ENST00000463200 THRAP3Q9Y2W1 955 aaKnown RBP16.95■□□□□ 0.3
LINC00879-202ENST00000463200 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
LINC00879-202ENST00000463200 CSB-PGBD3P0DP91 1061 aa16.94■□□□□ 0.3
LINC00879-202ENST00000463200 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC00879-202ENST00000463200 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
LINC00879-202ENST00000463200 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
LINC00879-202ENST00000463200 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
LINC00879-202ENST00000463200 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
LINC00879-202ENST00000463200 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms