RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
SND1-203ENST00000463020 THSD7AQ9UPZ6 1657 aa23.24■■□□□ 1.31
SND1-203ENST00000463020 SPATA31A5Q5VU36 1347 aa23.23■■□□□ 1.31
SND1-203ENST00000463020 SPATA31A7Q8IWB4 1347 aa23.23■■□□□ 1.31
SND1-203ENST00000463020 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
SND1-203ENST00000463020 KDM2AQ9Y2K7 1162 aa23.22■■□□□ 1.31
SND1-203ENST00000463020 WASLO00401 505 aaPredicted RBP23.21■■□□□ 1.31
SND1-203ENST00000463020 HRCP23327 699 aa23.21■■□□□ 1.31
SND1-203ENST00000463020 TNS1Q9HBL0 1735 aaKnown RBP23.2■■□□□ 1.3
SND1-203ENST00000463020 GPRASP1Q5JY77 1395 aa23.2■■□□□ 1.3
SND1-203ENST00000463020 ATP7BP35670 1465 aa23.19■■□□□ 1.3
SND1-203ENST00000463020 BAG6P46379 1132 aa23.18■■□□□ 1.3
SND1-203ENST00000463020 DCAF11Q8TEB1 546 aa23.18■■□□□ 1.3
SND1-203ENST00000463020 RGPD1P0DJD0 1748 aa23.18■■□□□ 1.3
SND1-203ENST00000463020 ARHGEF28Q8N1W1 1705 aaKnown RBP23.17■■□□□ 1.3
SND1-203ENST00000463020 KIAA0232Q92628 1395 aa23.16■■□□□ 1.3
SND1-203ENST00000463020 PAK3O75914 559 aaPredicted RBP23.16■■□□□ 1.3
SND1-203ENST00000463020 CHRNA2Q15822 529 aa23.16■■□□□ 1.3
SND1-203ENST00000463020 PHRF1Q9P1Y6 1649 aaKnown RBP23.15■■□□□ 1.3
SND1-203ENST00000463020 NGDNQ8NEJ9 315 aaKnown RBP23.15■■□□□ 1.3
SND1-203ENST00000463020 R3HDM1Q15032 1099 aaKnown RBP23.14■■□□□ 1.29
SND1-203ENST00000463020 PRDM11Q9NQV5 511 aa23.14■■□□□ 1.29
SND1-203ENST00000463020 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
SND1-203ENST00000463020 SPATA31A1Q5TZJ5 1347 aa23.13■■□□□ 1.29
SND1-203ENST00000463020 NUTM2GQ5VZR2 741 aa23.13■■□□□ 1.29
SND1-203ENST00000463020 DISP2A7MBM2 1401 aa23.13■■□□□ 1.29
SND1-203ENST00000463020 EZH2Q15910 746 aaKnown RBP23.12■■□□□ 1.29
SND1-203ENST00000463020 NUDT16Q96DE0 195 aaKnown RBP23.11■■□□□ 1.29
SND1-203ENST00000463020 STRN4Q9NRL3 753 aa23.1■■□□□ 1.29
SND1-203ENST00000463020 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
SND1-203ENST00000463020 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
SND1-203ENST00000463020 ITSN1Q15811 1721 aa23.08■■□□□ 1.29
SND1-203ENST00000463020 TRIM37O94972 964 aa23.08■■□□□ 1.29
SND1-203ENST00000463020 NRKQ7Z2Y5 1582 aa23.07■■□□□ 1.28
SND1-203ENST00000463020 CAMKK2Q96RR4 588 aa23.07■■□□□ 1.28
SND1-203ENST00000463020 CDK19Q9BWU1 502 aa23.06■■□□□ 1.28
SND1-203ENST00000463020 USP35Q9P2H5 1018 aa23.05■■□□□ 1.28
SND1-203ENST00000463020 CAMTA1Q9Y6Y1 1673 aa23.05■■□□□ 1.28
SND1-203ENST00000463020 POLR3AO14802 1390 aaPredicted RBP23.04■■□□□ 1.28
SND1-203ENST00000463020 SSH2Q76I76 1423 aa23.04■■□□□ 1.28
SND1-203ENST00000463020 ACEP12821 1306 aa23.04■■□□□ 1.28
SND1-203ENST00000463020 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
SND1-203ENST00000463020 LARP1Q6PKG0 1096 aaKnown RBP23.02■■□□□ 1.28
SND1-203ENST00000463020 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
SND1-203ENST00000463020 RREB1Q92766 1687 aa23■■□□□ 1.27
SND1-203ENST00000463020 NUP188Q5SRE5 1749 aa22.99■■□□□ 1.27
SND1-203ENST00000463020 APBA3O96018 575 aa22.99■■□□□ 1.27
SND1-203ENST00000463020 FAM196AQ6ZSG2 479 aa22.99■■□□□ 1.27
SND1-203ENST00000463020 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
SND1-203ENST00000463020 USP19O94966 1318 aa22.98■■□□□ 1.27
SND1-203ENST00000463020 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
SND1-203ENST00000463020 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
SND1-203ENST00000463020 CPDO75976 1380 aa22.95■■□□□ 1.26
SND1-203ENST00000463020 CCDC61Q9Y6R9 512 aa22.95■■□□□ 1.26
SND1-203ENST00000463020 ABTB2Q8N961 1025 aa22.94■■□□□ 1.26
SND1-203ENST00000463020 EVA1CP58658 441 aa22.93■■□□□ 1.26
SND1-203ENST00000463020 STAC3Q96MF2 364 aa22.93■■□□□ 1.26
SND1-203ENST00000463020 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
SND1-203ENST00000463020 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
SND1-203ENST00000463020 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
SND1-203ENST00000463020 KIAA1210Q9ULL0 1709 aa22.91■■□□□ 1.26
SND1-203ENST00000463020 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
SND1-203ENST00000463020 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
SND1-203ENST00000463020 CABP2Q9NPB3 220 aa22.9■■□□□ 1.26
SND1-203ENST00000463020 PEAK1Q9H792 1746 aa22.89■■□□□ 1.26
SND1-203ENST00000463020 PARP4Q9UKK3 1724 aaKnown RBP22.89■■□□□ 1.26
SND1-203ENST00000463020 GCP02774 474 aa22.89■■□□□ 1.25
SND1-203ENST00000463020 PTF1AQ7RTS3 328 aa22.88■■□□□ 1.25
SND1-203ENST00000463020 LRRC37A3O60309 1634 aa22.86■■□□□ 1.25
SND1-203ENST00000463020 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
SND1-203ENST00000463020 SRPK2P78362 688 aaKnown RBP22.85■■□□□ 1.25
SND1-203ENST00000463020 SLIT3O75094 1523 aa22.84■■□□□ 1.25
SND1-203ENST00000463020 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
SND1-203ENST00000463020 CRB1P82279 1406 aa22.83■■□□□ 1.25
SND1-203ENST00000463020 NLRP13Q86W25 1043 aa22.83■■□□□ 1.25
SND1-203ENST00000463020 PIK3C2AO00443 1686 aa22.83■■□□□ 1.24
SND1-203ENST00000463020 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
SND1-203ENST00000463020 USP6P35125 1406 aa22.82■■□□□ 1.24
SND1-203ENST00000463020 COL18A1P39060 1754 aa22.82■■□□□ 1.24
SND1-203ENST00000463020 CABP1Q9NZU7 370 aa22.82■■□□□ 1.24
SND1-203ENST00000463020 THRAP3Q9Y2W1 955 aaKnown RBP22.82■■□□□ 1.24
SND1-203ENST00000463020 ANO8Q9HCE9 1232 aaPredicted RBP22.81■■□□□ 1.24
SND1-203ENST00000463020 PDGFDQ9GZP0 370 aaPredicted RBP22.8■■□□□ 1.24
SND1-203ENST00000463020 AXIN2Q9Y2T1 843 aa22.8■■□□□ 1.24
SND1-203ENST00000463020 AATKQ6ZMQ8 1374 aa22.79■■□□□ 1.24
SND1-203ENST00000463020 SBF2Q86WG5 1849 aa22.79■■□□□ 1.24
SND1-203ENST00000463020 OVOS2A0A0G2JMS6 1433 aa22.79■■□□□ 1.24
SND1-203ENST00000463020 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
SND1-203ENST00000463020 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
SND1-203ENST00000463020 NLRP6P59044 892 aa22.78■■□□□ 1.24
SND1-203ENST00000463020 NBPF14Q5TI25 921 aa22.78■■□□□ 1.24
SND1-203ENST00000463020 WNK3Q9BYP7 1800 aa22.78■■□□□ 1.24
SND1-203ENST00000463020 UTRNP46939 3433 aa22.76■■□□□ 1.23
SND1-203ENST00000463020 CASZ1Q86V15 1759 aa22.76■■□□□ 1.23
SND1-203ENST00000463020 PROM2Q8N271 834 aa22.75■■□□□ 1.23
SND1-203ENST00000463020 MARCH10Q8NA82 808 aaPredicted RBP22.75■■□□□ 1.23
SND1-203ENST00000463020 RGPD3A6NKT7 1758 aaPredicted RBP22.74■■□□□ 1.23
SND1-203ENST00000463020 RGPD4Q7Z3J3 1758 aa22.74■■□□□ 1.23
SND1-203ENST00000463020 KCNQ2O43526 872 aa22.74■■□□□ 1.23
SND1-203ENST00000463020 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms