RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-212ENST00000463005 MYOM2P54296 1465 aa12.02□□□□□ -0.48
GARNL3-212ENST00000463005 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.01□□□□□ -0.49
GARNL3-212ENST00000463005 FOXO3O43524 673 aa12.01□□□□□ -0.49
GARNL3-212ENST00000463005 PPLO60437 1756 aa12□□□□□ -0.49
GARNL3-212ENST00000463005 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
GARNL3-212ENST00000463005 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
GARNL3-212ENST00000463005 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
GARNL3-212ENST00000463005 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-212ENST00000463005 STK24Q9Y6E0 443 aa11.99□□□□□ -0.49
GARNL3-212ENST00000463005 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-212ENST00000463005 PXDNQ92626 1479 aa11.99□□□□□ -0.49
GARNL3-212ENST00000463005 CDC42BPGQ6DT37 1551 aa11.99□□□□□ -0.49
GARNL3-212ENST00000463005 SF3B2Q13435 895 aaKnown RBP11.98□□□□□ -0.49
GARNL3-212ENST00000463005 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
GARNL3-212ENST00000463005 SLIT2O94813 1529 aa11.96□□□□□ -0.49
GARNL3-212ENST00000463005 SPATA31A3Q5VYP0 1347 aa11.96□□□□□ -0.49
GARNL3-212ENST00000463005 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
GARNL3-212ENST00000463005 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
GARNL3-212ENST00000463005 NAIPQ13075 1403 aa11.95□□□□□ -0.5
GARNL3-212ENST00000463005 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-212ENST00000463005 XPCQ01831 940 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-212ENST00000463005 GLI3P10071 1580 aa11.95□□□□□ -0.5
GARNL3-212ENST00000463005 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
GARNL3-212ENST00000463005 ABCC11Q96J66 1382 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
GARNL3-212ENST00000463005 PSME1Q06323 249 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 KRT28Q7Z3Y7 464 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 WAPLQ7Z5K2 1190 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 TECPR2O15040 1411 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
GARNL3-212ENST00000463005 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 VPS72Q15906 364 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 DEFB132Q7Z7B7 95 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 STK26Q9P289 416 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 EP400Q96L91 3159 aa11.93□□□□□ -0.5
GARNL3-212ENST00000463005 FMN2Q9NZ56 1722 aa11.92□□□□□ -0.5
GARNL3-212ENST00000463005 NWD2Q9ULI1 1742 aa11.92□□□□□ -0.5
GARNL3-212ENST00000463005 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
GARNL3-212ENST00000463005 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
GARNL3-212ENST00000463005 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
GARNL3-212ENST00000463005 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
GARNL3-212ENST00000463005 ADGRF5Q8IZF2 1346 aa11.91□□□□□ -0.5
GARNL3-212ENST00000463005 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
GARNL3-212ENST00000463005 KRT27Q7Z3Y8 459 aa11.91□□□□□ -0.5
GARNL3-212ENST00000463005 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
GARNL3-212ENST00000463005 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
GARNL3-212ENST00000463005 LRP5O75197 1615 aa11.9□□□□□ -0.5
GARNL3-212ENST00000463005 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
GARNL3-212ENST00000463005 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
GARNL3-212ENST00000463005 BAG6P46379 1132 aa11.89□□□□□ -0.51
GARNL3-212ENST00000463005 RGL3Q3MIN7 710 aa11.89□□□□□ -0.51
GARNL3-212ENST00000463005 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
GARNL3-212ENST00000463005 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
GARNL3-212ENST00000463005 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
GARNL3-212ENST00000463005 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
GARNL3-212ENST00000463005 SBNO1A3KN83 1393 aa11.88□□□□□ -0.51
GARNL3-212ENST00000463005 PLCH1Q4KWH8 1693 aa11.87□□□□□ -0.51
GARNL3-212ENST00000463005 TNS3Q68CZ2 1445 aa11.87□□□□□ -0.51
GARNL3-212ENST00000463005 ARHGEF10O15013 1369 aa11.87□□□□□ -0.51
GARNL3-212ENST00000463005 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
GARNL3-212ENST00000463005 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
GARNL3-212ENST00000463005 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
GARNL3-212ENST00000463005 SPATA31E1Q6ZUB1 1445 aa11.86□□□□□ -0.51
GARNL3-212ENST00000463005 DHX57Q6P158 1386 aaKnown RBP11.85□□□□□ -0.51
GARNL3-212ENST00000463005 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
GARNL3-212ENST00000463005 HRCP23327 699 aa11.85□□□□□ -0.51
GARNL3-212ENST00000463005 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
GARNL3-212ENST00000463005 C14orf93Q9H972 538 aaKnown RBP11.85□□□□□ -0.51
GARNL3-212ENST00000463005 PIK3C2GO75747 1445 aa11.85□□□□□ -0.51
GARNL3-212ENST00000463005 NRXN1Q9ULB1 1477 aa11.84□□□□□ -0.51
GARNL3-212ENST00000463005 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
GARNL3-212ENST00000463005 A0A0G2JS52 829 aa11.83□□□□□ -0.52
GARNL3-212ENST00000463005 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-212ENST00000463005 MYT1Q01538 1121 aa11.83□□□□□ -0.52
GARNL3-212ENST00000463005 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-212ENST00000463005 ACIN1Q9UKV3 1341 aaKnown RBP11.83□□□□□ -0.52
GARNL3-212ENST00000463005 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
GARNL3-212ENST00000463005 MAP3K13O43283 966 aa11.82□□□□□ -0.52
GARNL3-212ENST00000463005 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
GARNL3-212ENST00000463005 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
GARNL3-212ENST00000463005 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
GARNL3-212ENST00000463005 BTG4Q9NY30 223 aa11.82□□□□□ -0.52
GARNL3-212ENST00000463005 NRAPQ86VF7 1730 aa11.81□□□□□ -0.52
GARNL3-212ENST00000463005 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-212ENST00000463005 COL14A1Q05707 1796 aaKnown RBP11.81□□□□□ -0.52
GARNL3-212ENST00000463005 ANKARQ7Z5J8 1434 aa11.8□□□□□ -0.52
GARNL3-212ENST00000463005 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-212ENST00000463005 PSEN1P49768 467 aa11.8□□□□□ -0.52
GARNL3-212ENST00000463005 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
GARNL3-212ENST00000463005 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
GARNL3-212ENST00000463005 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
GARNL3-212ENST00000463005 POGKQ9P215 609 aa11.8□□□□□ -0.52
GARNL3-212ENST00000463005 CFAP70Q5T0N1 1121 aa11.79□□□□□ -0.52
GARNL3-212ENST00000463005 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
GARNL3-212ENST00000463005 SPATA31A5Q5VU36 1347 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms