RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	MARF1	Q9Y4F3	1742 aa	Known RBP	13.49	□□□□□ -0.25
PSMD4-208	ENST00000462970	ALS2	Q96Q42	1657 aa		13.49	□□□□□ -0.25
PSMD4-208	ENST00000462970	ATAD2	Q6PL18	1390 aa		13.48	□□□□□ -0.25
PSMD4-208	ENST00000462970	AFF2	P51816	1311 aa		13.48	□□□□□ -0.25
PSMD4-208	ENST00000462970	ABCA3	Q99758	1704 aa		13.47	□□□□□ -0.25
PSMD4-208	ENST00000462970	POLR3A	O14802	1390 aa	Predicted RBP	13.47	□□□□□ -0.25
PSMD4-208	ENST00000462970	AKAP12	Q02952	1782 aa		13.46	□□□□□ -0.25
PSMD4-208	ENST00000462970	TESK2	Q96S53	571 aa		13.46	□□□□□ -0.25
PSMD4-208	ENST00000462970	TMF1	P82094	1093 aa		13.45	□□□□□ -0.26
PSMD4-208	ENST00000462970	ZNF772	Q68DY9	489 aa	Predicted RBP	13.45	□□□□□ -0.26
PSMD4-208	ENST00000462970	ABTB2	Q8N961	1025 aa		13.45	□□□□□ -0.26
PSMD4-208	ENST00000462970	POLR3GL	Q9BT43	218 aa		13.45	□□□□□ -0.26
PSMD4-208	ENST00000462970	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
PSMD4-208	ENST00000462970	KTN1	Q86UP2	1357 aa	Known RBP	13.44	□□□□□ -0.26
PSMD4-208	ENST00000462970	SLC24A1	O60721	1099 aa		13.43	□□□□□ -0.26
PSMD4-208	ENST00000462970	HSPA5	P11021	654 aa	Known RBP	13.43	□□□□□ -0.26
PSMD4-208	ENST00000462970	USP6	P35125	1406 aa		13.43	□□□□□ -0.26
PSMD4-208	ENST00000462970	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD4-208	ENST00000462970	SLC12A5	Q9H2X9	1139 aa		13.43	□□□□□ -0.26
PSMD4-208	ENST00000462970	ZBTB7C	A1YPR0	619 aa		13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	RXRB	P28702	533 aa		13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	USP21	Q9UK80	565 aa		13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	MON2	Q7Z3U7	1717 aa		13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	CRYBG1	Q9Y4K1	1723 aa		13.42	□□□□□ -0.26
PSMD4-208	ENST00000462970	NLRP6	P59044	892 aa		13.41	□□□□□ -0.26
PSMD4-208	ENST00000462970	ZNF692	Q9BU19	519 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD4-208	ENST00000462970	TERF2IP	Q9NYB0	399 aa		13.41	□□□□□ -0.26
PSMD4-208	ENST00000462970	PLCH1	Q4KWH8	1693 aa		13.4	□□□□□ -0.26
PSMD4-208	ENST00000462970	CDCA8	Q53HL2	280 aa		13.4	□□□□□ -0.26
PSMD4-208	ENST00000462970	NLRP13	Q86W25	1043 aa		13.4	□□□□□ -0.26
PSMD4-208	ENST00000462970	QTRT2	Q9H974	415 aa	Known RBP	13.4	□□□□□ -0.26
PSMD4-208	ENST00000462970	TTC21B	Q7Z4L5	1316 aa		13.39	□□□□□ -0.27
PSMD4-208	ENST00000462970	SOX12	O15370	315 aa		13.39	□□□□□ -0.27
PSMD4-208	ENST00000462970	ZC3H6	P61129	1189 aa	Known RBP	13.39	□□□□□ -0.27
PSMD4-208	ENST00000462970	PRDM11	Q9NQV5	511 aa		13.39	□□□□□ -0.27
PSMD4-208	ENST00000462970	PIK3C2A	O00443	1686 aa		13.39	□□□□□ -0.27
PSMD4-208	ENST00000462970	BRD4	O60885	1362 aa	Predicted RBP	13.38	□□□□□ -0.27
PSMD4-208	ENST00000462970	CHRNA2	Q15822	529 aa		13.38	□□□□□ -0.27
PSMD4-208	ENST00000462970	PUS7	Q96PZ0	661 aa	Known RBP	13.38	□□□□□ -0.27
PSMD4-208	ENST00000462970	CCDC9	Q9Y3X0	531 aa	Known RBP	13.38	□□□□□ -0.27
PSMD4-208	ENST00000462970	CPSF1	Q10570	1443 aa	Known RBP	13.38	□□□□□ -0.27
PSMD4-208	ENST00000462970	NRK	Q7Z2Y5	1582 aa		13.37	□□□□□ -0.27
PSMD4-208	ENST00000462970		A0A1W2PP64	1363 aa		13.37	□□□□□ -0.27
PSMD4-208	ENST00000462970	FAM83G	A6ND36	823 aa		13.37	□□□□□ -0.27
PSMD4-208	ENST00000462970	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
PSMD4-208	ENST00000462970	COL14A1	Q05707	1796 aa	Known RBP	13.37	□□□□□ -0.27
PSMD4-208	ENST00000462970	TTC21A	Q8NDW8	1320 aa		13.37	□□□□□ -0.27
PSMD4-208	ENST00000462970	CD163L1	Q9NR16	1453 aa		13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	KIAA0232	Q92628	1395 aa		13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	NINL	Q9Y2I6	1382 aa		13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	NME9	Q86XW9	330 aa		13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	ZRANB1	Q9UGI0	708 aa		13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	TRPC5	Q9UL62	973 aa	Predicted RBP	13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	NWD2	Q9ULI1	1742 aa		13.36	□□□□□ -0.27
PSMD4-208	ENST00000462970	BTG4	Q9NY30	223 aa		13.35	□□□□□ -0.27
PSMD4-208	ENST00000462970	EDC4	Q6P2E9	1401 aa	Known RBP	13.35	□□□□□ -0.27
PSMD4-208	ENST00000462970	SSH2	Q76I76	1423 aa		13.35	□□□□□ -0.27
PSMD4-208	ENST00000462970	USP19	O94966	1318 aa		13.35	□□□□□ -0.27
PSMD4-208	ENST00000462970	MYOM1	P52179	1685 aa		13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	GC	P02774	474 aa		13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	RBM6	P78332	1123 aa	Known RBP	13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	UNC5CL	Q8IV45	518 aa		13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	STRN4	Q9NRL3	753 aa		13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	BCL9L	Q86UU0	1499 aa		13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	SLIT2	O94813	1529 aa		13.34	□□□□□ -0.27
PSMD4-208	ENST00000462970	ATRN	O75882	1429 aa		13.33	□□□□□ -0.28
PSMD4-208	ENST00000462970	ANKRD36B	Q8N2N9	1353 aa		13.32	□□□□□ -0.28
PSMD4-208	ENST00000462970		A0A0G2JS52	829 aa		13.32	□□□□□ -0.28
PSMD4-208	ENST00000462970	MYT1	Q01538	1121 aa		13.32	□□□□□ -0.28
PSMD4-208	ENST00000462970	RGS12	O14924	1447 aa		13.31	□□□□□ -0.28
PSMD4-208	ENST00000462970	NRAP	Q86VF7	1730 aa		13.31	□□□□□ -0.28
PSMD4-208	ENST00000462970	EVA1C	P58658	441 aa		13.31	□□□□□ -0.28
PSMD4-208	ENST00000462970	KIF20B	Q96Q89	1820 aa		13.31	□□□□□ -0.28
PSMD4-208	ENST00000462970	SLIT3	O75094	1523 aa		13.3	□□□□□ -0.28
PSMD4-208	ENST00000462970	KCNH5	Q8NCM2	988 aa		13.3	□□□□□ -0.28
PSMD4-208	ENST00000462970	GJD4	Q96KN9	370 aa	Predicted RBP	13.3	□□□□□ -0.28
PSMD4-208	ENST00000462970	RGPD5	Q99666	1765 aa		13.3	□□□□□ -0.28
PSMD4-208	ENST00000462970	VPS72	Q15906	364 aa		13.29	□□□□□ -0.28
PSMD4-208	ENST00000462970	COG3	Q96JB2	828 aa		13.29	□□□□□ -0.28
PSMD4-208	ENST00000462970	LTN1	O94822	1766 aa		13.29	□□□□□ -0.28
PSMD4-208	ENST00000462970	C11orf95	C9JLR9	678 aa	Predicted RBP	13.28	□□□□□ -0.28
PSMD4-208	ENST00000462970	GGNBP2	Q9H3C7	697 aa		13.28	□□□□□ -0.28
PSMD4-208	ENST00000462970	CPD	O75976	1380 aa		13.28	□□□□□ -0.28
PSMD4-208	ENST00000462970	NSD3	Q9BZ95	1437 aa		13.28	□□□□□ -0.28
PSMD4-208	ENST00000462970	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.28	□□□□□ -0.28
PSMD4-208	ENST00000462970	GLI3	P10071	1580 aa		13.28	□□□□□ -0.28
PSMD4-208	ENST00000462970	USP35	Q9P2H5	1018 aa		13.27	□□□□□ -0.29
PSMD4-208	ENST00000462970	USP31	Q70CQ4	1352 aa		13.27	□□□□□ -0.29
PSMD4-208	ENST00000462970	USP54	Q70EL1	1684 aa		13.27	□□□□□ -0.29
PSMD4-208	ENST00000462970	CAMTA1	Q9Y6Y1	1673 aa		13.27	□□□□□ -0.29
PSMD4-208	ENST00000462970	NFAT5	O94916	1531 aa		13.26	□□□□□ -0.29
PSMD4-208	ENST00000462970	LMO7	Q8WWI1	1683 aa		13.26	□□□□□ -0.29
PSMD4-208	ENST00000462970	CARD14	Q9BXL6	1004 aa		13.26	□□□□□ -0.29
PSMD4-208	ENST00000462970	CSB-PGBD3	P0DP91	1061 aa		13.25	□□□□□ -0.29
PSMD4-208	ENST00000462970	FAM98C	Q17RN3	349 aa	Known RBP	13.25	□□□□□ -0.29
PSMD4-208	ENST00000462970	PANK3	Q9H999	370 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms