RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 SMARCA2P51531 1590 aa6.01□□□□□ -1.45
CD46-210ENST00000462968 PLEKHG3A1L390 1219 aa6□□□□□ -1.45
CD46-210ENST00000462968 PPFIA3O75145 1194 aa6□□□□□ -1.45
CD46-210ENST00000462968 ADH1CP00326 375 aa6□□□□□ -1.45
CD46-210ENST00000462968 WDR4P57081 412 aaKnown RBP6□□□□□ -1.45
CD46-210ENST00000462968 CYB5RLQ6IPT4 315 aa6□□□□□ -1.45
CD46-210ENST00000462968 ATAD2BQ9ULI0 1458 aa6□□□□□ -1.45
CD46-210ENST00000462968 VARSP26640 1264 aaKnown RBP5.99□□□□□ -1.45
CD46-210ENST00000462968 KRT76Q01546 638 aa5.99□□□□□ -1.45
CD46-210ENST00000462968 BAP1Q92560 729 aa5.99□□□□□ -1.45
CD46-210ENST00000462968 UNC93B1Q9H1C4 597 aa5.99□□□□□ -1.45
CD46-210ENST00000462968 EVA1BQ9NVM1 165 aa5.99□□□□□ -1.45
CD46-210ENST00000462968 BAZ1AQ9NRL2 1556 aaPredicted RBP5.98□□□□□ -1.45
CD46-210ENST00000462968 MS4A1P11836 297 aa5.98□□□□□ -1.45
CD46-210ENST00000462968 MDM2Q00987 491 aaPredicted RBP5.98□□□□□ -1.45
CD46-210ENST00000462968 PTPRNQ16849 979 aa5.98□□□□□ -1.45
CD46-210ENST00000462968 LINC01559Q495D7 138 aa5.98□□□□□ -1.45
CD46-210ENST00000462968 ZNF511Q8NB15 262 aa5.98□□□□□ -1.45
CD46-210ENST00000462968 ADAMTS8Q9UP79 889 aa5.98□□□□□ -1.45
CD46-210ENST00000462968 RNF225M0QZC1 329 aaPredicted RBP5.97□□□□□ -1.45
CD46-210ENST00000462968 MAP2K5Q13163 448 aa5.97□□□□□ -1.45
CD46-210ENST00000462968 PCDHGC3Q9UN70 934 aa5.97□□□□□ -1.45
CD46-210ENST00000462968 LAMC3Q9Y6N6 1575 aa5.97□□□□□ -1.45
CD46-210ENST00000462968 RIMBP3CA6NJZ7 1639 aa5.96□□□□□ -1.45
CD46-210ENST00000462968 RIMBP3BA6NNM3 1639 aa5.96□□□□□ -1.45
CD46-210ENST00000462968 RIMBP3Q9UFD9 1639 aa5.96□□□□□ -1.45
CD46-210ENST00000462968 HMGXB3Q12766 1538 aa5.96□□□□□ -1.46
CD46-210ENST00000462968 MAN1A2O60476 641 aa5.96□□□□□ -1.46
CD46-210ENST00000462968 GPIHBP1Q8IV16 184 aa5.96□□□□□ -1.46
CD46-210ENST00000462968 GPR161Q8N6U8 529 aaKnown RBP5.96□□□□□ -1.46
CD46-210ENST00000462968 MRC2Q9UBG0 1479 aa5.96□□□□□ -1.46
CD46-210ENST00000462968 ARHGEF11O15085 1522 aa5.95□□□□□ -1.46
CD46-210ENST00000462968 KCNH2Q12809 1159 aa5.95□□□□□ -1.46
CD46-210ENST00000462968 CDK15Q96Q40 435 aa5.95□□□□□ -1.46
CD46-210ENST00000462968 ZFAND3Q9H8U3 227 aa5.95□□□□□ -1.46
CD46-210ENST00000462968 FDX1P10109 184 aa5.94□□□□□ -1.46
CD46-210ENST00000462968 CNTNAP3BQ96NU0 1288 aa5.94□□□□□ -1.46
CD46-210ENST00000462968 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
CD46-210ENST00000462968 FAM217BQ9NTX9 383 aaPredicted RBP5.94□□□□□ -1.46
CD46-210ENST00000462968 DNMT3AQ9Y6K1 912 aaPredicted RBP5.94□□□□□ -1.46
CD46-210ENST00000462968 IRF6O14896 467 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 ZIC2O95409 532 aaPredicted RBP5.93□□□□□ -1.46
CD46-210ENST00000462968 IGHA1P01876 353 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 C6orf118Q5T5N4 469 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 ZNF385CQ66K41 422 aaPredicted RBP5.93□□□□□ -1.46
CD46-210ENST00000462968 FAM174AQ8TBP5 190 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 ITPKCQ96DU7 683 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 DNMT3LQ9UJW3 386 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 WDR62O43379 1518 aa5.93□□□□□ -1.46
CD46-210ENST00000462968 SOS2Q07890 1332 aaPredicted RBP5.93□□□□□ -1.46
CD46-210ENST00000462968 C6orf229H3BNL8 230 aa5.92□□□□□ -1.46
CD46-210ENST00000462968 NR3C2P08235 984 aa5.92□□□□□ -1.46
CD46-210ENST00000462968 AMER1Q5JTC6 1135 aaPredicted RBP5.92□□□□□ -1.46
CD46-210ENST00000462968 GPAT2Q6NUI2 795 aa5.92□□□□□ -1.46
CD46-210ENST00000462968 NUTM1Q86Y26 1132 aa5.92□□□□□ -1.46
CD46-210ENST00000462968 XP32Q5T750 250 aa5.91□□□□□ -1.46
CD46-210ENST00000462968 DESI1Q6ICB0 168 aa5.91□□□□□ -1.46
CD46-210ENST00000462968 MEIOBQ8N635 442 aa5.91□□□□□ -1.46
CD46-210ENST00000462968 GPCPD1Q9NPB8 672 aa5.91□□□□□ -1.46
CD46-210ENST00000462968 CADPSQ9ULU8 1353 aa5.91□□□□□ -1.46
CD46-210ENST00000462968 BAZ1BQ9UIG0 1483 aaKnown RBP5.9□□□□□ -1.46
CD46-210ENST00000462968 ARHGEF15O94989 841 aa5.9□□□□□ -1.46
CD46-210ENST00000462968 BMP2P12643 396 aa5.9□□□□□ -1.46
CD46-210ENST00000462968 GRM5P41594 1212 aa5.9□□□□□ -1.46
CD46-210ENST00000462968 NR5A1Q13285 461 aa5.9□□□□□ -1.46
CD46-210ENST00000462968 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
CD46-210ENST00000462968 NANOS1Q8WY41 292 aaKnown RBP5.9□□□□□ -1.46
CD46-210ENST00000462968 COL25A1Q9BXS0 654 aaPredicted RBP5.9□□□□□ -1.46
CD46-210ENST00000462968 KIF21AQ7Z4S6 1674 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 SLURP2P0DP57 97 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 CLCN1P35523 988 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 IRS1P35568 1242 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 FOXK2Q01167 660 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 RNFT1Q5M7Z0 435 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 PRR7Q8TB68 274 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 WHAMMQ8TF30 809 aa5.89□□□□□ -1.47
CD46-210ENST00000462968 RTN4Q9NQC3 1192 aaKnown RBP5.89□□□□□ -1.47
CD46-210ENST00000462968 MINK1Q8N4C8 1332 aaPredicted RBP5.89□□□□□ -1.47
CD46-210ENST00000462968 FOXJ1Q92949 421 aa5.88□□□□□ -1.47
CD46-210ENST00000462968 SPTLC1O15269 473 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 UPP2O95045 317 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 PTSQ03393 145 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 ARID5BQ14865 1188 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.87□□□□□ -1.471e-7■□□□□ 8.6
CD46-210ENST00000462968 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 KANK3Q6NY19 840 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 SVOPQ8N4V2 548 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 SPIRE2Q8WWL2 714 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 CCDC102AQ96A19 550 aa5.87□□□□□ -1.47
CD46-210ENST00000462968 ARAP1Q96P48 1450 aa5.86□□□□□ -1.47
CD46-210ENST00000462968 SPDYE5A6NIY4 337 aa5.86□□□□□ -1.47
CD46-210ENST00000462968 NDUFV2P19404 249 aa5.86□□□□□ -1.47
CD46-210ENST00000462968 LYPD8Q6UX82 237 aa5.86□□□□□ -1.47
CD46-210ENST00000462968 MOXD2PA6NHM9 499 aa5.85□□□□□ -1.47
CD46-210ENST00000462968 TSEN34Q9BSV6 310 aaKnown RBP5.85□□□□□ -1.47
CD46-210ENST00000462968 CEP164Q9UPV0 1460 aa5.84□□□□□ -1.47
CD46-210ENST00000462968 F12P00748 615 aaPredicted RBP5.84□□□□□ -1.47
CD46-210ENST00000462968 MTMR2Q13614 643 aa5.84□□□□□ -1.47
CD46-210ENST00000462968 CCDC155Q8N6L0 562 aa5.84□□□□□ -1.47
CD46-210ENST00000462968 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms