RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 MFAP1P55081 439 aaKnown RBP4.43□□□□□ -1.7
COL8A1-204ENST00000462604 CFAP44Q96MT7 982 aa4.43□□□□□ -1.7
COL8A1-204ENST00000462604 ISY1Q9ULR0 285 aaKnown RBP4.43□□□□□ -1.7
COL8A1-204ENST00000462604 TNNQ9UQP3 1299 aa4.43□□□□□ -1.7
COL8A1-204ENST00000462604 ATAD2Q6PL18 1390 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 ADGRB1O14514 1584 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 CHD1O14646 1710 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 U2SURPO15042 1029 aaKnown RBP4.42□□□□□ -1.7
COL8A1-204ENST00000462604 VGFO15240 615 aaPredicted RBP4.42□□□□□ -1.7
COL8A1-204ENST00000462604 HSP90AB1P08238 724 aaKnown RBP4.42□□□□□ -1.7
COL8A1-204ENST00000462604 CALD1Q05682 793 aaKnown RBP4.42□□□□□ -1.7
COL8A1-204ENST00000462604 NPATQ14207 1427 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 ATF7IPQ6VMQ6 1270 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 ASXL2Q76L83 1435 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 POGZQ7Z3K3 1410 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 TERF2IPQ9NYB0 399 aa4.42□□□□□ -1.7
COL8A1-204ENST00000462604 CIZ1Q9ULV3 898 aaPredicted RBP4.42□□□□□ -1.7
COL8A1-204ENST00000462604 PPRC1Q5VV67 1664 aaKnown RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 ADGRB2O60241 1585 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 ZFYVE9O95405 1425 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 FSD2A1L4K1 749 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 TRAK2O60296 914 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 TRIM27P14373 513 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 TMPOP42166 694 aaKnown RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 MRE11P49959 708 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 SRPK2P78362 688 aaKnown RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 EXOSC9Q06265 439 aaKnown RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 ALDH1L2Q3SY69 923 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 TMEM132EQ6IEE7 984 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 HDGFL2Q7Z4V5 671 aaPredicted RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 SMC5Q8IY18 1101 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 SSH1Q8WYL5 1049 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 TSR2Q969E8 191 aaKnown RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 SNX21Q969T3 373 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 ZNF428Q96B54 188 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 GBP4Q96PP9 640 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 NOB1Q9ULX3 412 aaKnown RBP4.41□□□□□ -1.7
COL8A1-204ENST00000462604 MED14O60244 1454 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 ABCC3O15438 1527 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 TULP4Q9NRJ4 1543 aa4.41□□□□□ -1.7
COL8A1-204ENST00000462604 DIAPH1O60610 1272 aaKnown RBP4.4□□□□□ -1.71
COL8A1-204ENST00000462604 RBM25P49756 843 aaKnown RBP4.4□□□□□ -1.71
COL8A1-204ENST00000462604 RIPK4P57078 832 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 NUCB1Q02818 461 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 SKOR2Q2VWA4 1001 aaPredicted RBP4.4□□□□□ -1.71
COL8A1-204ENST00000462604 GGT6Q6P531 493 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 CHD1LQ86WJ1 897 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 TMEM57Q8N5G2 664 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 SPRYD3Q8NCJ5 442 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 GCC1Q96CN9 775 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 PLEKHF1Q96S99 279 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 GZF1Q9H116 711 aaPredicted RBP4.4□□□□□ -1.71
COL8A1-204ENST00000462604 CABP2Q9NPB3 220 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 COL3A1P02461 1466 aaPredicted RBP4.4□□□□□ -1.71
COL8A1-204ENST00000462604 MLH3Q9UHC1 1453 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 SHPRHQ149N8 1683 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 HECW2Q9P2P5 1572 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 A0A1W2PP64 1363 aa4.4□□□□□ -1.71
COL8A1-204ENST00000462604 NCOA3Q9Y6Q9 1424 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 GOLGA6L22H0YM25 854 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 HSP90AA1P07900 732 aaKnown RBP4.39□□□□□ -1.71
COL8A1-204ENST00000462604 LMOD3Q0VAK6 560 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 BMP2KLQ5H9B9 411 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 TRIM44Q96DX7 344 aaPredicted RBP4.39□□□□□ -1.71
COL8A1-204ENST00000462604 GGNBP2Q9H3C7 697 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 RRAGDQ9NQL2 400 aaPredicted RBP4.39□□□□□ -1.71
COL8A1-204ENST00000462604 ZBTB40Q9NUA8 1239 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 TRIM35Q9UPQ4 493 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 GLI2P10070 1586 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 CFAP74Q9C0B2 1584 aa4.39□□□□□ -1.71
COL8A1-204ENST00000462604 MROH2AA6NES4 1674 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 QRICH2Q9H0J4 1663 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 ARHGAP31Q2M1Z3 1444 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 CD109Q6YHK3 1445 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 IFT172Q9UG01 1749 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 CDC45O75419 566 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 FCHSD2O94868 740 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 XRCC6P12956 609 aaKnown RBP eCLIP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 CLCN1P35523 988 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 DDIT3P35638 169 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 VASPP50552 380 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 BRPF1P55201 1214 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 SAFB2Q14151 953 aaKnown RBP eCLIP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 RAB3GAP1Q15042 981 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 NFE2L2Q16236 605 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 GLIPR1L2Q4G1C9 344 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 UBE2Q2Q8WVN8 375 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 ARHGAP45Q92619 1136 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 ANP32BQ92688 251 aaKnown RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 NAP1L5Q96NT1 182 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 ZNF692Q9BU19 519 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 API5Q9BZZ5 524 aaKnown RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 LNPKQ9C0E8 428 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 GRPEL1Q9HAV7 217 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 SLC52A1Q9NWF4 448 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 STK26Q9P289 416 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 FRMPD1Q5SYB0 1578 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 REREQ9P2R6 1566 aa4.38□□□□□ -1.71
COL8A1-204ENST00000462604 MINK1Q8N4C8 1332 aaPredicted RBP4.38□□□□□ -1.71
COL8A1-204ENST00000462604 PNPLA6Q8IY17 1366 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms