RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 SSH2Q76I76 1423 aa20.12■□□□□ 0.81
RPRD1B-203ENST00000462548 TTC21BQ7Z4L5 1316 aa20.11■□□□□ 0.81
RPRD1B-203ENST00000462548 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
RPRD1B-203ENST00000462548 C14orf37Q86TY3 774 aa20.11■□□□□ 0.81
RPRD1B-203ENST00000462548 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
RPRD1B-203ENST00000462548 FBLN1P23142 703 aa20.1■□□□□ 0.81
RPRD1B-203ENST00000462548 INSRP06213 1382 aa20.09■□□□□ 0.81
RPRD1B-203ENST00000462548 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
RPRD1B-203ENST00000462548 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.8
RPRD1B-203ENST00000462548 TMEM94Q12767 1356 aa20.08■□□□□ 0.8
RPRD1B-203ENST00000462548 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
RPRD1B-203ENST00000462548 COL3A1P02461 1466 aaPredicted RBP20.04■□□□□ 0.8
RPRD1B-203ENST00000462548 COG3Q96JB2 828 aa20.04■□□□□ 0.8
RPRD1B-203ENST00000462548 OVOS2A0A0J9YW53 1432 aa20.03■□□□□ 0.8
RPRD1B-203ENST00000462548 OVOS2Q6IE36 1432 aa20.03■□□□□ 0.8
RPRD1B-203ENST00000462548 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
RPRD1B-203ENST00000462548 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
RPRD1B-203ENST00000462548 ESCO1Q5FWF5 840 aa20.02■□□□□ 0.8
RPRD1B-203ENST00000462548 ZNF335Q9H4Z2 1342 aaPredicted RBP20.02■□□□□ 0.8
RPRD1B-203ENST00000462548 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.8
RPRD1B-203ENST00000462548 XIRP1Q702N8 1843 aaKnown RBP20.02■□□□□ 0.8
RPRD1B-203ENST00000462548 CFAP53Q96M91 514 aa20.02■□□□□ 0.79
RPRD1B-203ENST00000462548 ORAI2Q96SN7 254 aa20.02■□□□□ 0.79
RPRD1B-203ENST00000462548 SALL2Q9Y467 1007 aaPredicted RBP20.01■□□□□ 0.79
RPRD1B-203ENST00000462548 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
RPRD1B-203ENST00000462548 TTC21AQ8NDW8 1320 aa20.01■□□□□ 0.79
RPRD1B-203ENST00000462548 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
RPRD1B-203ENST00000462548 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
RPRD1B-203ENST00000462548 NCOA3Q9Y6Q9 1424 aa20■□□□□ 0.79
RPRD1B-203ENST00000462548 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
RPRD1B-203ENST00000462548 EMILIN1Q9Y6C2 1016 aa20■□□□□ 0.79
RPRD1B-203ENST00000462548 AATKQ6ZMQ8 1374 aa19.99■□□□□ 0.79
RPRD1B-203ENST00000462548 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
RPRD1B-203ENST00000462548 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
RPRD1B-203ENST00000462548 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
RPRD1B-203ENST00000462548 MST1RQ04912 1400 aa19.97■□□□□ 0.79
RPRD1B-203ENST00000462548 USP31Q70CQ4 1352 aa19.97■□□□□ 0.79
RPRD1B-203ENST00000462548 RRS1Q15050 365 aaKnown RBP19.97■□□□□ 0.79
RPRD1B-203ENST00000462548 MARF1Q9Y4F3 1742 aaKnown RBP19.96■□□□□ 0.79
RPRD1B-203ENST00000462548 DCCP43146 1447 aa19.96■□□□□ 0.79
RPRD1B-203ENST00000462548 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
RPRD1B-203ENST00000462548 ATF3P18847 181 aa19.94■□□□□ 0.78
RPRD1B-203ENST00000462548 NUTM2GQ5VZR2 741 aa19.94■□□□□ 0.78
RPRD1B-203ENST00000462548 FOXO3O43524 673 aa19.93■□□□□ 0.78
RPRD1B-203ENST00000462548 CDK12Q9NYV4 1490 aaPredicted RBP19.93■□□□□ 0.78
RPRD1B-203ENST00000462548 PAK3O75914 559 aaPredicted RBP19.93■□□□□ 0.78
RPRD1B-203ENST00000462548 USP54Q70EL1 1684 aa19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 APAF1O14727 1248 aa19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 DIAPH1O60610 1272 aaKnown RBP19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 PSME1Q06323 249 aa19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 SOX12O15370 315 aa19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 NLRP6P59044 892 aa19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 MSH6P52701 1360 aa19.92■□□□□ 0.78
RPRD1B-203ENST00000462548 PEAK1Q9H792 1746 aa19.91■□□□□ 0.78
RPRD1B-203ENST00000462548 KIF1AQ12756 1690 aa19.91■□□□□ 0.78
RPRD1B-203ENST00000462548 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
RPRD1B-203ENST00000462548 ABTB2Q8N961 1025 aa19.91■□□□□ 0.78
RPRD1B-203ENST00000462548 CADPS2Q86UW7 1296 aa19.9■□□□□ 0.78
RPRD1B-203ENST00000462548 NUDCQ9Y266 331 aa19.89■□□□□ 0.77
RPRD1B-203ENST00000462548 TRPM3Q9HCF6 1732 aaPredicted RBP19.89■□□□□ 0.77
RPRD1B-203ENST00000462548 CDCA7LQ96GN5 454 aa19.88■□□□□ 0.77
RPRD1B-203ENST00000462548 IQSEC2Q5JU85 1478 aa19.88■□□□□ 0.77
RPRD1B-203ENST00000462548 IL13P35225 146 aa19.88■□□□□ 0.77
RPRD1B-203ENST00000462548 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
RPRD1B-203ENST00000462548 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
RPRD1B-203ENST00000462548 ZNF521Q96K83 1311 aa19.87■□□□□ 0.77
RPRD1B-203ENST00000462548 MAP3K19Q56UN5 1328 aa19.87■□□□□ 0.77
RPRD1B-203ENST00000462548 DDX17Q92841 729 aaKnown RBP19.86■□□□□ 0.77
RPRD1B-203ENST00000462548 KRT28Q7Z3Y7 464 aa19.86■□□□□ 0.77
RPRD1B-203ENST00000462548 PLEKHF1Q96S99 279 aa19.85■□□□□ 0.77
RPRD1B-203ENST00000462548 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
RPRD1B-203ENST00000462548 TCP11L2Q8N4U5 519 aa19.84■□□□□ 0.77
RPRD1B-203ENST00000462548 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
RPRD1B-203ENST00000462548 HSP90AB2PQ58FF8 381 aa19.83■□□□□ 0.77
RPRD1B-203ENST00000462548 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.77
RPRD1B-203ENST00000462548 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
RPRD1B-203ENST00000462548 SBNO1A3KN83 1393 aa19.81■□□□□ 0.76
RPRD1B-203ENST00000462548 NFAT5O94916 1531 aa19.81■□□□□ 0.76
RPRD1B-203ENST00000462548 RSPH6AQ9H0K4 717 aa19.81■□□□□ 0.76
RPRD1B-203ENST00000462548 HMOX1P09601 288 aa19.8■□□□□ 0.76
RPRD1B-203ENST00000462548 NEUROD2Q15784 382 aa19.8■□□□□ 0.76
RPRD1B-203ENST00000462548 ALS2Q96Q42 1657 aa19.8■□□□□ 0.76
RPRD1B-203ENST00000462548 BRINP3Q76B58 766 aa19.8■□□□□ 0.76
RPRD1B-203ENST00000462548 FLT4P35916 1363 aa19.79■□□□□ 0.76
RPRD1B-203ENST00000462548 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
RPRD1B-203ENST00000462548 FCHSD2O94868 740 aa19.78■□□□□ 0.76
RPRD1B-203ENST00000462548 LMOD2Q6P5Q4 547 aa19.78■□□□□ 0.76
RPRD1B-203ENST00000462548 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
RPRD1B-203ENST00000462548 SLAIN2Q9P270 581 aa19.78■□□□□ 0.76
RPRD1B-203ENST00000462548 SLIT3O75094 1523 aa19.78■□□□□ 0.76
RPRD1B-203ENST00000462548 PXDNQ92626 1479 aa19.77■□□□□ 0.76
RPRD1B-203ENST00000462548 PRKAR2BP31323 418 aa19.77■□□□□ 0.76
RPRD1B-203ENST00000462548 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
RPRD1B-203ENST00000462548 AMPHP49418 695 aa19.77■□□□□ 0.76
RPRD1B-203ENST00000462548 NGEFQ8N5V2 710 aa19.77■□□□□ 0.76
RPRD1B-203ENST00000462548 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.76
RPRD1B-203ENST00000462548 LTN1O94822 1766 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms