RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
LRRC47-202ENST00000462356 USP21Q9UK80 565 aa18.81■□□□□ 0.6
LRRC47-202ENST00000462356 USP47Q96K76 1375 aa18.81■□□□□ 0.6
LRRC47-202ENST00000462356 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
LRRC47-202ENST00000462356 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
LRRC47-202ENST00000462356 TMC1Q8TDI8 760 aa18.79■□□□□ 0.6
LRRC47-202ENST00000462356 SOCS7O14512 581 aa18.78■□□□□ 0.6
LRRC47-202ENST00000462356 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
LRRC47-202ENST00000462356 ATAD2Q6PL18 1390 aa18.78■□□□□ 0.6
LRRC47-202ENST00000462356 RXRBP28702 533 aa18.77■□□□□ 0.6
LRRC47-202ENST00000462356 FNBP4Q8N3X1 1017 aaPredicted RBP18.77■□□□□ 0.6
LRRC47-202ENST00000462356 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
LRRC47-202ENST00000462356 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
LRRC47-202ENST00000462356 USP6P35125 1406 aa18.75■□□□□ 0.59
LRRC47-202ENST00000462356 BCL9LQ86UU0 1499 aa18.74■□□□□ 0.59
LRRC47-202ENST00000462356 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
LRRC47-202ENST00000462356 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
LRRC47-202ENST00000462356 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
LRRC47-202ENST00000462356 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
LRRC47-202ENST00000462356 NLRP6P59044 892 aa18.72■□□□□ 0.59
LRRC47-202ENST00000462356 CHRNA2Q15822 529 aa18.72■□□□□ 0.59
LRRC47-202ENST00000462356 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
LRRC47-202ENST00000462356 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
LRRC47-202ENST00000462356 TTC21BQ7Z4L5 1316 aa18.72■□□□□ 0.59
LRRC47-202ENST00000462356 SLIT2O94813 1529 aa18.71■□□□□ 0.59
LRRC47-202ENST00000462356 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
LRRC47-202ENST00000462356 TMF1P82094 1093 aa18.71■□□□□ 0.59
LRRC47-202ENST00000462356 CPSF1Q10570 1443 aaKnown RBP18.71■□□□□ 0.59
LRRC47-202ENST00000462356 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.58
LRRC47-202ENST00000462356 PLCH1Q4KWH8 1693 aa18.7■□□□□ 0.58
LRRC47-202ENST00000462356 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
LRRC47-202ENST00000462356 NLRP13Q86W25 1043 aa18.7■□□□□ 0.58
LRRC47-202ENST00000462356 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
LRRC47-202ENST00000462356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
LRRC47-202ENST00000462356 CD163L1Q9NR16 1453 aa18.7■□□□□ 0.58
LRRC47-202ENST00000462356 KIAA0232Q92628 1395 aa18.69■□□□□ 0.58
LRRC47-202ENST00000462356 ATRNO75882 1429 aa18.69■□□□□ 0.58
LRRC47-202ENST00000462356 ZBTB7CA1YPR0 619 aa18.69■□□□□ 0.58
LRRC47-202ENST00000462356 PRDM11Q9NQV5 511 aa18.69■□□□□ 0.58
LRRC47-202ENST00000462356 BTG4Q9NY30 223 aa18.69■□□□□ 0.58
LRRC47-202ENST00000462356 ZRANB1Q9UGI0 708 aa18.69■□□□□ 0.58
LRRC47-202ENST00000462356 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
LRRC47-202ENST00000462356 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
LRRC47-202ENST00000462356 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
LRRC47-202ENST00000462356 PIK3C2AO00443 1686 aa18.67■□□□□ 0.58
LRRC47-202ENST00000462356 SOX12O15370 315 aa18.67■□□□□ 0.58
LRRC47-202ENST00000462356 GCP02774 474 aa18.67■□□□□ 0.58
LRRC47-202ENST00000462356 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
LRRC47-202ENST00000462356 USP19O94966 1318 aa18.67■□□□□ 0.58
LRRC47-202ENST00000462356 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
LRRC47-202ENST00000462356 GJD4Q96KN9 370 aaPredicted RBP18.66■□□□□ 0.58
LRRC47-202ENST00000462356 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
LRRC47-202ENST00000462356 A0A1W2PP64 1363 aa18.66■□□□□ 0.58
LRRC47-202ENST00000462356 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
LRRC47-202ENST00000462356 RGS12O14924 1447 aa18.66■□□□□ 0.58
LRRC47-202ENST00000462356 NRKQ7Z2Y5 1582 aa18.65■□□□□ 0.58
LRRC47-202ENST00000462356 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
LRRC47-202ENST00000462356 NME9Q86XW9 330 aa18.65■□□□□ 0.58
LRRC47-202ENST00000462356 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
LRRC47-202ENST00000462356 COL14A1Q05707 1796 aaKnown RBP18.65■□□□□ 0.58
LRRC47-202ENST00000462356 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.64■□□□□ 0.57
LRRC47-202ENST00000462356 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
LRRC47-202ENST00000462356 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
LRRC47-202ENST00000462356 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
LRRC47-202ENST00000462356 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
LRRC47-202ENST00000462356 VPS72Q15906 364 aa18.62■□□□□ 0.57
LRRC47-202ENST00000462356 GLI3P10071 1580 aa18.62■□□□□ 0.57
LRRC47-202ENST00000462356 NRAPQ86VF7 1730 aa18.62■□□□□ 0.57
LRRC47-202ENST00000462356 CDK12Q9NYV4 1490 aaPredicted RBP18.6■□□□□ 0.57
LRRC47-202ENST00000462356 SLIT3O75094 1523 aa18.59■□□□□ 0.57
LRRC47-202ENST00000462356 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
LRRC47-202ENST00000462356 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
LRRC47-202ENST00000462356 EVA1CP58658 441 aa18.58■□□□□ 0.56
LRRC47-202ENST00000462356 CPDO75976 1380 aa18.57■□□□□ 0.56
LRRC47-202ENST00000462356 NINLQ9Y2I6 1382 aa18.57■□□□□ 0.56
LRRC47-202ENST00000462356 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
LRRC47-202ENST00000462356 ANKRD36BQ8N2N9 1353 aa18.56■□□□□ 0.56
LRRC47-202ENST00000462356 A0A0G2JS52 829 aa18.56■□□□□ 0.56
LRRC47-202ENST00000462356 C11orf95C9JLR9 678 aaPredicted RBP18.56■□□□□ 0.56
LRRC47-202ENST00000462356 MYT1Q01538 1121 aa18.56■□□□□ 0.56
LRRC47-202ENST00000462356 FAM98CQ17RN3 349 aaKnown RBP18.56■□□□□ 0.56
LRRC47-202ENST00000462356 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
LRRC47-202ENST00000462356 MYOM1P52179 1685 aa18.55■□□□□ 0.56
LRRC47-202ENST00000462356 LARP1Q6PKG0 1096 aaKnown RBP18.55■□□□□ 0.56
LRRC47-202ENST00000462356 SEPT12Q8IYM1 358 aa18.55■□□□□ 0.56
LRRC47-202ENST00000462356 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
LRRC47-202ENST00000462356 AXIN2Q9Y2T1 843 aa18.55■□□□□ 0.56
LRRC47-202ENST00000462356 USP31Q70CQ4 1352 aa18.55■□□□□ 0.56
LRRC47-202ENST00000462356 SPATA31A5Q5VU36 1347 aa18.54■□□□□ 0.56
LRRC47-202ENST00000462356 SPATA31A7Q8IWB4 1347 aa18.54■□□□□ 0.56
LRRC47-202ENST00000462356 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
LRRC47-202ENST00000462356 ARHGEF25Q86VW2 580 aa18.54■□□□□ 0.56
LRRC47-202ENST00000462356 FBLN1P23142 703 aa18.53■□□□□ 0.56
LRRC47-202ENST00000462356 CARD14Q9BXL6 1004 aa18.53■□□□□ 0.56
LRRC47-202ENST00000462356 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
LRRC47-202ENST00000462356 UPF1Q92900 1129 aaKnown RBP eCLIP18.52■□□□□ 0.56
LRRC47-202ENST00000462356 NFAT5O94916 1531 aa18.52■□□□□ 0.56
LRRC47-202ENST00000462356 SPATA31A1Q5TZJ5 1347 aa18.51■□□□□ 0.55
LRRC47-202ENST00000462356 BRWD3Q6RI45 1802 aa18.51■□□□□ 0.55
LRRC47-202ENST00000462356 COL18A1P39060 1754 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 270.6 ms