RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
CPNE1-221ENST00000462352 BRD4O60885 1362 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-221ENST00000462352 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
CPNE1-221ENST00000462352 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
CPNE1-221ENST00000462352 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
CPNE1-221ENST00000462352 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
CPNE1-221ENST00000462352 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
CPNE1-221ENST00000462352 SHPRHQ149N8 1683 aa16.34■□□□□ 0.21
CPNE1-221ENST00000462352 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
CPNE1-221ENST00000462352 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
CPNE1-221ENST00000462352 ARHGEF10O15013 1369 aa16.33■□□□□ 0.2
CPNE1-221ENST00000462352 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
CPNE1-221ENST00000462352 ALS2Q96Q42 1657 aa16.33■□□□□ 0.2
CPNE1-221ENST00000462352 EDC4Q6P2E9 1401 aaKnown RBP16.32■□□□□ 0.2
CPNE1-221ENST00000462352 COL22A1Q8NFW1 1626 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-221ENST00000462352 SPATA31A6Q5VVP1 1343 aa16.3■□□□□ 0.2
CPNE1-221ENST00000462352 TTC21AQ8NDW8 1320 aa16.3■□□□□ 0.2
CPNE1-221ENST00000462352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
CPNE1-221ENST00000462352 ABTB2Q8N961 1025 aa16.3■□□□□ 0.2
CPNE1-221ENST00000462352 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
CPNE1-221ENST00000462352 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
CPNE1-221ENST00000462352 PANK3Q9H999 370 aa16.28■□□□□ 0.2
CPNE1-221ENST00000462352 NSD3Q9BZ95 1437 aa16.28■□□□□ 0.2
CPNE1-221ENST00000462352 PIK3C2AO00443 1686 aa16.27■□□□□ 0.2
CPNE1-221ENST00000462352 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
CPNE1-221ENST00000462352 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.2
CPNE1-221ENST00000462352 MED1Q15648 1581 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-221ENST00000462352 NUTM2BA6NNL0 878 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-221ENST00000462352 NUTM2EB1AL46 878 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-221ENST00000462352 NLRP6P59044 892 aa16.26■□□□□ 0.19
CPNE1-221ENST00000462352 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
CPNE1-221ENST00000462352 NME9Q86XW9 330 aa16.26■□□□□ 0.19
CPNE1-221ENST00000462352 NUTM2AQ8IVF1 878 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-221ENST00000462352 LRP6O75581 1613 aa16.25■□□□□ 0.19
CPNE1-221ENST00000462352 USP19O94966 1318 aa16.24■□□□□ 0.19
CPNE1-221ENST00000462352 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
CPNE1-221ENST00000462352 CRYBG1Q9Y4K1 1723 aa16.24■□□□□ 0.19
CPNE1-221ENST00000462352 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
CPNE1-221ENST00000462352 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
CPNE1-221ENST00000462352 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-221ENST00000462352 FYB1O15117 783 aa16.22■□□□□ 0.19
CPNE1-221ENST00000462352 PHRF1Q9P1Y6 1649 aaKnown RBP16.22■□□□□ 0.19
CPNE1-221ENST00000462352 OVOS2A0A0J9YW53 1432 aa16.21■□□□□ 0.19
CPNE1-221ENST00000462352 OVOS2Q6IE36 1432 aa16.21■□□□□ 0.19
CPNE1-221ENST00000462352 SLIT3O75094 1523 aa16.21■□□□□ 0.19
CPNE1-221ENST00000462352 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-221ENST00000462352 ADAMTS2O95450 1211 aa16.21■□□□□ 0.19
CPNE1-221ENST00000462352 MARF1Q9Y4F3 1742 aaKnown RBP16.21■□□□□ 0.19
CPNE1-221ENST00000462352 USP54Q70EL1 1684 aa16.21■□□□□ 0.18
CPNE1-221ENST00000462352 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
CPNE1-221ENST00000462352 GCP02774 474 aa16.2■□□□□ 0.18
CPNE1-221ENST00000462352 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
CPNE1-221ENST00000462352 KNSTRNQ9Y448 316 aa16.2■□□□□ 0.18
CPNE1-221ENST00000462352 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
CPNE1-221ENST00000462352 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-221ENST00000462352 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
CPNE1-221ENST00000462352 COG3Q96JB2 828 aa16.19■□□□□ 0.18
CPNE1-221ENST00000462352 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
CPNE1-221ENST00000462352 SOX12O15370 315 aa16.16■□□□□ 0.18
CPNE1-221ENST00000462352 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
CPNE1-221ENST00000462352 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
CPNE1-221ENST00000462352 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-221ENST00000462352 C8orf37Q96NL8 207 aa16.16■□□□□ 0.18
CPNE1-221ENST00000462352 NSD2O96028 1365 aa16.15■□□□□ 0.18
CPNE1-221ENST00000462352 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
CPNE1-221ENST00000462352 NFAT5O94916 1531 aa16.15■□□□□ 0.18
CPNE1-221ENST00000462352 CPDO75976 1380 aa16.14■□□□□ 0.17
CPNE1-221ENST00000462352 NGLY1Q96IV0 654 aa16.14■□□□□ 0.17
CPNE1-221ENST00000462352 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
CPNE1-221ENST00000462352 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
CPNE1-221ENST00000462352 ANKRD26Q9UPS8 1709 aa16.13■□□□□ 0.17
CPNE1-221ENST00000462352 CHRNA2Q15822 529 aa16.12■□□□□ 0.17
CPNE1-221ENST00000462352 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
CPNE1-221ENST00000462352 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
CPNE1-221ENST00000462352 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
CPNE1-221ENST00000462352 ZBTB7CA1YPR0 619 aa16.11■□□□□ 0.17
CPNE1-221ENST00000462352 FBLN1P23142 703 aa16.11■□□□□ 0.17
CPNE1-221ENST00000462352 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
CPNE1-221ENST00000462352 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
CPNE1-221ENST00000462352 AFF2P51816 1311 aa16.11■□□□□ 0.17
CPNE1-221ENST00000462352 SLIT2O94813 1529 aa16.1■□□□□ 0.17
CPNE1-221ENST00000462352 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
CPNE1-221ENST00000462352 PLCH1Q4KWH8 1693 aa16.09■□□□□ 0.17
CPNE1-221ENST00000462352 BTG4Q9NY30 223 aa16.09■□□□□ 0.17
CPNE1-221ENST00000462352 AATKQ6ZMQ8 1374 aa16.09■□□□□ 0.17
CPNE1-221ENST00000462352 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-221ENST00000462352 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
CPNE1-221ENST00000462352 RRS1Q15050 365 aaKnown RBP16.08■□□□□ 0.16
CPNE1-221ENST00000462352 USP21Q9UK80 565 aa16.08■□□□□ 0.16
CPNE1-221ENST00000462352 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.16
CPNE1-221ENST00000462352 BCL9LQ86UU0 1499 aa16.08■□□□□ 0.16
CPNE1-221ENST00000462352 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.16
CPNE1-221ENST00000462352 RGS17Q9UGC6 210 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-221ENST00000462352 LTN1O94822 1766 aa16.07■□□□□ 0.16
CPNE1-221ENST00000462352 COL18A1P39060 1754 aa16.07■□□□□ 0.16
CPNE1-221ENST00000462352 NWD2Q9ULI1 1742 aa16.06■□□□□ 0.16
CPNE1-221ENST00000462352 CAMTA1Q9Y6Y1 1673 aa16.06■□□□□ 0.16
CPNE1-221ENST00000462352 ZNF772Q68DY9 489 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-221ENST00000462352 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
CPNE1-221ENST00000462352 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms