RNA–Protein interactions for RNA: ENST00000462135.1

STX1A-206, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-206ENST00000462135 USP31Q70CQ4 1352 aa16.2■□□□□ 0.18
STX1A-206ENST00000462135 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
STX1A-206ENST00000462135 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
STX1A-206ENST00000462135 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
STX1A-206ENST00000462135 CCDC184Q52MB2 194 aa16.19■□□□□ 0.18
STX1A-206ENST00000462135 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
STX1A-206ENST00000462135 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
STX1A-206ENST00000462135 PMFBP1Q8TBY8 1022 aa16.18■□□□□ 0.18
STX1A-206ENST00000462135 OVOS2A0A0J9YW53 1432 aa16.18■□□□□ 0.18
STX1A-206ENST00000462135 OVOS2Q6IE36 1432 aa16.18■□□□□ 0.18
STX1A-206ENST00000462135 USP54Q70EL1 1684 aa16.18■□□□□ 0.18
STX1A-206ENST00000462135 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
STX1A-206ENST00000462135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
STX1A-206ENST00000462135 COG3Q96JB2 828 aa16.17■□□□□ 0.18
STX1A-206ENST00000462135 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
STX1A-206ENST00000462135 LTBP4Q8N2S1 1624 aa16.16■□□□□ 0.18
STX1A-206ENST00000462135 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
STX1A-206ENST00000462135 NME9Q86XW9 330 aa16.14■□□□□ 0.17
STX1A-206ENST00000462135 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
STX1A-206ENST00000462135 ORAI2Q96SN7 254 aa16.13■□□□□ 0.17
STX1A-206ENST00000462135 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
STX1A-206ENST00000462135 PSME1Q06323 249 aa16.12■□□□□ 0.17
STX1A-206ENST00000462135 NPHP3Q7Z494 1330 aa16.12■□□□□ 0.17
STX1A-206ENST00000462135 MTHFSP49914 203 aa16.11■□□□□ 0.17
STX1A-206ENST00000462135 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
STX1A-206ENST00000462135 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
STX1A-206ENST00000462135 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
STX1A-206ENST00000462135 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
STX1A-206ENST00000462135 KIF24Q5T7B8 1368 aa16.1■□□□□ 0.17
STX1A-206ENST00000462135 CDK12Q9NYV4 1490 aaPredicted RBP16.1■□□□□ 0.17
STX1A-206ENST00000462135 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
STX1A-206ENST00000462135 TRPM3Q9HCF6 1732 aaPredicted RBP16.08■□□□□ 0.17
STX1A-206ENST00000462135 FOXO3O43524 673 aa16.08■□□□□ 0.16
STX1A-206ENST00000462135 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.16
STX1A-206ENST00000462135 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
STX1A-206ENST00000462135 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
STX1A-206ENST00000462135 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
STX1A-206ENST00000462135 IQSEC2Q5JU85 1478 aa16.08■□□□□ 0.16
STX1A-206ENST00000462135 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
STX1A-206ENST00000462135 BRINP3Q76B58 766 aa16.07■□□□□ 0.16
STX1A-206ENST00000462135 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
STX1A-206ENST00000462135 ABTB2Q8N961 1025 aa16.07■□□□□ 0.16
STX1A-206ENST00000462135 POLKQ9UBT6 870 aa16.07■□□□□ 0.16
STX1A-206ENST00000462135 PXDNQ92626 1479 aa16.06■□□□□ 0.16
STX1A-206ENST00000462135 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
STX1A-206ENST00000462135 NLRP6P59044 892 aa16.05■□□□□ 0.16
STX1A-206ENST00000462135 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
STX1A-206ENST00000462135 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
STX1A-206ENST00000462135 USP19O94966 1318 aa16.04■□□□□ 0.16
STX1A-206ENST00000462135 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
STX1A-206ENST00000462135 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
STX1A-206ENST00000462135 SLIT3O75094 1523 aa16.04■□□□□ 0.16
STX1A-206ENST00000462135 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
STX1A-206ENST00000462135 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
STX1A-206ENST00000462135 MARF1Q9Y4F3 1742 aaKnown RBP16.03■□□□□ 0.16
STX1A-206ENST00000462135 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
STX1A-206ENST00000462135 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
STX1A-206ENST00000462135 ALS2Q96Q42 1657 aa16.03■□□□□ 0.16
STX1A-206ENST00000462135 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
STX1A-206ENST00000462135 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
STX1A-206ENST00000462135 ZBED9Q6R2W3 1325 aa16.02■□□□□ 0.16
STX1A-206ENST00000462135 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
STX1A-206ENST00000462135 ADAMTS8Q9UP79 889 aa16.02■□□□□ 0.16
STX1A-206ENST00000462135 MED1Q15648 1581 aaPredicted RBP16.01■□□□□ 0.15
STX1A-206ENST00000462135 NFAT5O94916 1531 aa16.01■□□□□ 0.15
STX1A-206ENST00000462135 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
STX1A-206ENST00000462135 NHSL1Q5SYE7 1610 aa16.01■□□□□ 0.15
STX1A-206ENST00000462135 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
STX1A-206ENST00000462135 FLT4P35916 1363 aa16■□□□□ 0.15
STX1A-206ENST00000462135 SPATA31A3Q5VYP0 1347 aa16■□□□□ 0.15
STX1A-206ENST00000462135 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
STX1A-206ENST00000462135 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
STX1A-206ENST00000462135 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
STX1A-206ENST00000462135 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
STX1A-206ENST00000462135 MAP3K19Q56UN5 1328 aa15.98■□□□□ 0.15
STX1A-206ENST00000462135 AHDC1Q5TGY3 1603 aaPredicted RBP15.98■□□□□ 0.15
STX1A-206ENST00000462135 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
STX1A-206ENST00000462135 ABCC6O95255 1503 aa15.97■□□□□ 0.15
STX1A-206ENST00000462135 IL13P35225 146 aa15.96■□□□□ 0.15
STX1A-206ENST00000462135 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.15
STX1A-206ENST00000462135 TOM1O60784 492 aa15.95■□□□□ 0.14
STX1A-206ENST00000462135 GCP02774 474 aa15.95■□□□□ 0.14
STX1A-206ENST00000462135 PEAK1Q9H792 1746 aa15.94■□□□□ 0.14
STX1A-206ENST00000462135 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
STX1A-206ENST00000462135 FCHSD2O94868 740 aa15.94■□□□□ 0.14
STX1A-206ENST00000462135 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
STX1A-206ENST00000462135 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
STX1A-206ENST00000462135 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
STX1A-206ENST00000462135 ROBO1Q9Y6N7 1651 aa15.93■□□□□ 0.14
STX1A-206ENST00000462135 FBLN1P23142 703 aa15.93■□□□□ 0.14
STX1A-206ENST00000462135 AMPHP49418 695 aa15.93■□□□□ 0.14
STX1A-206ENST00000462135 NUTM2GQ5VZR2 741 aa15.93■□□□□ 0.14
STX1A-206ENST00000462135 CPDO75976 1380 aa15.92■□□□□ 0.14
STX1A-206ENST00000462135 PDE3BQ13370 1112 aa15.92■□□□□ 0.14
STX1A-206ENST00000462135 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
STX1A-206ENST00000462135 IP6K1Q92551 441 aa15.92■□□□□ 0.14
STX1A-206ENST00000462135 CRYBG1Q9Y4K1 1723 aa15.91■□□□□ 0.14
STX1A-206ENST00000462135 HOXC9P31274 260 aa15.91■□□□□ 0.14
STX1A-206ENST00000462135 EIF4A2Q14240 407 aaKnown RBP15.91■□□□□ 0.14
STX1A-206ENST00000462135 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms