RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 CABLES1Q8TDN4 633 aa14.37□□□□□ -0.11
SPTAN1-204ENST00000461855 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
SPTAN1-204ENST00000461855 CPSF1Q10570 1443 aaKnown RBP14.37□□□□□ -0.11
SPTAN1-204ENST00000461855 USP47Q96K76 1375 aa14.36□□□□□ -0.11
SPTAN1-204ENST00000461855 USP6P35125 1406 aa14.36□□□□□ -0.11
SPTAN1-204ENST00000461855 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
SPTAN1-204ENST00000461855 BCL9LQ86UU0 1499 aa14.36□□□□□ -0.11
SPTAN1-204ENST00000461855 SLIT2O94813 1529 aa14.36□□□□□ -0.11
SPTAN1-204ENST00000461855 MARF1Q9Y4F3 1742 aaKnown RBP14.35□□□□□ -0.11
SPTAN1-204ENST00000461855 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
SPTAN1-204ENST00000461855 LMOD2Q6P5Q4 547 aa14.34□□□□□ -0.11
SPTAN1-204ENST00000461855 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
SPTAN1-204ENST00000461855 USP21Q9UK80 565 aa14.34□□□□□ -0.11
SPTAN1-204ENST00000461855 ABCA3Q99758 1704 aa14.34□□□□□ -0.11
SPTAN1-204ENST00000461855 CRYBG1Q9Y4K1 1723 aa14.34□□□□□ -0.11
SPTAN1-204ENST00000461855 ATRNO75882 1429 aa14.33□□□□□ -0.11
SPTAN1-204ENST00000461855 CD163L1Q9NR16 1453 aa14.33□□□□□ -0.12
SPTAN1-204ENST00000461855 CDK12Q9NYV4 1490 aaPredicted RBP14.33□□□□□ -0.12
SPTAN1-204ENST00000461855 FAM83GA6ND36 823 aa14.33□□□□□ -0.12
SPTAN1-204ENST00000461855 USP19O94966 1318 aa14.33□□□□□ -0.12
SPTAN1-204ENST00000461855 RXRBP28702 533 aa14.32□□□□□ -0.12
SPTAN1-204ENST00000461855 RBM6P78332 1123 aaKnown RBP14.32□□□□□ -0.12
SPTAN1-204ENST00000461855 TRPC5Q9UL62 973 aaPredicted RBP14.32□□□□□ -0.12
SPTAN1-204ENST00000461855 UNC5CLQ8IV45 518 aa14.31□□□□□ -0.12
SPTAN1-204ENST00000461855 ABTB2Q8N961 1025 aa14.31□□□□□ -0.12
SPTAN1-204ENST00000461855 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
SPTAN1-204ENST00000461855 NINLQ9Y2I6 1382 aa14.31□□□□□ -0.12
SPTAN1-204ENST00000461855 NLRP13Q86W25 1043 aa14.3□□□□□ -0.12
SPTAN1-204ENST00000461855 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
SPTAN1-204ENST00000461855 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
SPTAN1-204ENST00000461855 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
SPTAN1-204ENST00000461855 TMF1P82094 1093 aa14.29□□□□□ -0.12
SPTAN1-204ENST00000461855 TTC21AQ8NDW8 1320 aa14.29□□□□□ -0.12
SPTAN1-204ENST00000461855 CPDO75976 1380 aa14.29□□□□□ -0.12
SPTAN1-204ENST00000461855 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.29□□□□□ -0.12
SPTAN1-204ENST00000461855 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.12
SPTAN1-204ENST00000461855 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
SPTAN1-204ENST00000461855 USP31Q70CQ4 1352 aa14.27□□□□□ -0.12
SPTAN1-204ENST00000461855 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.12
SPTAN1-204ENST00000461855 GCP02774 474 aa14.27□□□□□ -0.13
SPTAN1-204ENST00000461855 VPS72Q15906 364 aa14.27□□□□□ -0.13
SPTAN1-204ENST00000461855 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.13
SPTAN1-204ENST00000461855 GJD4Q96KN9 370 aaPredicted RBP14.27□□□□□ -0.13
SPTAN1-204ENST00000461855 PHRF1Q9P1Y6 1649 aaKnown RBP14.26□□□□□ -0.13
SPTAN1-204ENST00000461855 SLIT3O75094 1523 aa14.26□□□□□ -0.13
SPTAN1-204ENST00000461855 KIAA0232Q92628 1395 aa14.26□□□□□ -0.13
SPTAN1-204ENST00000461855 NLRP6P59044 892 aa14.26□□□□□ -0.13
SPTAN1-204ENST00000461855 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
SPTAN1-204ENST00000461855 MON2Q7Z3U7 1717 aa14.26□□□□□ -0.13
SPTAN1-204ENST00000461855 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
SPTAN1-204ENST00000461855 COL14A1Q05707 1796 aaKnown RBP14.25□□□□□ -0.13
SPTAN1-204ENST00000461855 ONECUT3O60422 494 aaPredicted RBP14.25□□□□□ -0.13
SPTAN1-204ENST00000461855 TMC1Q8TDI8 760 aa14.25□□□□□ -0.13
SPTAN1-204ENST00000461855 TERF2IPQ9NYB0 399 aa14.25□□□□□ -0.13
SPTAN1-204ENST00000461855 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
SPTAN1-204ENST00000461855 RGS12O14924 1447 aa14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 PLCH1Q4KWH8 1693 aa14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 EIF4G2P78344 907 aaKnown RBP eCLIP14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 HDGFL2Q7Z4V5 671 aaPredicted RBP14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 BTG4Q9NY30 223 aa14.24□□□□□ -0.13
SPTAN1-204ENST00000461855 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
SPTAN1-204ENST00000461855 NRAPQ86VF7 1730 aa14.23□□□□□ -0.13
SPTAN1-204ENST00000461855 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
SPTAN1-204ENST00000461855 GLI3P10071 1580 aa14.22□□□□□ -0.13
SPTAN1-204ENST00000461855 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
SPTAN1-204ENST00000461855 USP54Q70EL1 1684 aa14.22□□□□□ -0.13
SPTAN1-204ENST00000461855 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.13
SPTAN1-204ENST00000461855 AATKQ6ZMQ8 1374 aa14.21□□□□□ -0.14
SPTAN1-204ENST00000461855 LMO7Q8WWI1 1683 aa14.2□□□□□ -0.14
SPTAN1-204ENST00000461855 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
SPTAN1-204ENST00000461855 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
SPTAN1-204ENST00000461855 NME9Q86XW9 330 aa14.2□□□□□ -0.14
SPTAN1-204ENST00000461855 CAMTA1Q9Y6Y1 1673 aa14.2□□□□□ -0.14
SPTAN1-204ENST00000461855 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 OVOS2A0A0J9YW53 1432 aa14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 OVOS2Q6IE36 1432 aa14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 NFAT5O94916 1531 aa14.19□□□□□ -0.14
SPTAN1-204ENST00000461855 COL18A1P39060 1754 aa14.17□□□□□ -0.14
SPTAN1-204ENST00000461855 CARD14Q9BXL6 1004 aa14.17□□□□□ -0.14
SPTAN1-204ENST00000461855 SPATA31A1Q5TZJ5 1347 aa14.16□□□□□ -0.14
SPTAN1-204ENST00000461855 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
SPTAN1-204ENST00000461855 MYOM1P52179 1685 aa14.15□□□□□ -0.14
SPTAN1-204ENST00000461855 COL5A2P05997 1499 aaPredicted RBP14.15□□□□□ -0.14
SPTAN1-204ENST00000461855 C11orf95C9JLR9 678 aaPredicted RBP14.15□□□□□ -0.14
SPTAN1-204ENST00000461855 FYB1O15117 783 aa14.15□□□□□ -0.14
SPTAN1-204ENST00000461855 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
SPTAN1-204ENST00000461855 ABCC6O95255 1503 aa14.15□□□□□ -0.14
SPTAN1-204ENST00000461855 SEPT12Q8IYM1 358 aa14.14□□□□□ -0.15
SPTAN1-204ENST00000461855 LARP1Q6PKG0 1096 aaKnown RBP14.13□□□□□ -0.15
SPTAN1-204ENST00000461855 BARGINQ6ZT62 677 aa14.13□□□□□ -0.15
SPTAN1-204ENST00000461855 EVA1CP58658 441 aa14.12□□□□□ -0.15
SPTAN1-204ENST00000461855 STRN4Q9NRL3 753 aa14.12□□□□□ -0.15
SPTAN1-204ENST00000461855 THRAP3Q9Y2W1 955 aaKnown RBP14.12□□□□□ -0.15
SPTAN1-204ENST00000461855 CCDC9Q9Y3X0 531 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms