RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 EXOC6Q8TAG9 804 aa9.82□□□□□ -0.84
NPHP1-209ENST00000461707 PLCH1Q4KWH8 1693 aa9.81□□□□□ -0.84
NPHP1-209ENST00000461707 TMEM132EQ6IEE7 984 aa9.81□□□□□ -0.84
NPHP1-209ENST00000461707 PLEKHG1Q9ULL1 1385 aa9.81□□□□□ -0.84
NPHP1-209ENST00000461707 SCN11AQ9UI33 1791 aa9.81□□□□□ -0.84
NPHP1-209ENST00000461707 LAMB4A4D0S4 1761 aa9.8□□□□□ -0.84
NPHP1-209ENST00000461707 PPP2R1AP30153 589 aa9.8□□□□□ -0.84
NPHP1-209ENST00000461707 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
NPHP1-209ENST00000461707 CASZ1Q86V15 1759 aa9.8□□□□□ -0.84
NPHP1-209ENST00000461707 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
NPHP1-209ENST00000461707 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
NPHP1-209ENST00000461707 RREB1Q92766 1687 aa9.79□□□□□ -0.84
NPHP1-209ENST00000461707 RGPD5Q99666 1765 aa9.79□□□□□ -0.84
NPHP1-209ENST00000461707 C20orf194Q5TEA3 1177 aa9.79□□□□□ -0.84
NPHP1-209ENST00000461707 CCDC146Q8IYE0 955 aa9.79□□□□□ -0.84
NPHP1-209ENST00000461707 ANP32EQ9BTT0 268 aa9.78□□□□□ -0.84
NPHP1-209ENST00000461707 NHSL1Q5SYE7 1610 aa9.78□□□□□ -0.84
NPHP1-209ENST00000461707 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
NPHP1-209ENST00000461707 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
NPHP1-209ENST00000461707 RCAN3Q9UKA8 241 aa9.78□□□□□ -0.84
NPHP1-209ENST00000461707 TRAK1Q9UPV9 953 aa9.78□□□□□ -0.84
NPHP1-209ENST00000461707 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.84
NPHP1-209ENST00000461707 C5P01031 1676 aa9.77□□□□□ -0.85
NPHP1-209ENST00000461707 RIMS2Q9UQ26 1411 aa9.77□□□□□ -0.85
NPHP1-209ENST00000461707 CCDC136Q96JN2 1154 aa9.77□□□□□ -0.85
NPHP1-209ENST00000461707 DMRT2Q9Y5R5 561 aa9.77□□□□□ -0.85
NPHP1-209ENST00000461707 RGS12O14924 1447 aa9.77□□□□□ -0.85
NPHP1-209ENST00000461707 KNSTRNQ9Y448 316 aa9.77□□□□□ -0.85
NPHP1-209ENST00000461707 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
NPHP1-209ENST00000461707 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
NPHP1-209ENST00000461707 BRPF1P55201 1214 aaPredicted RBP9.75□□□□□ -0.85
NPHP1-209ENST00000461707 EDC4Q6P2E9 1401 aaKnown RBP9.75□□□□□ -0.85
NPHP1-209ENST00000461707 TNNT2P45379 298 aaPredicted RBP9.75□□□□□ -0.85
NPHP1-209ENST00000461707 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
NPHP1-209ENST00000461707 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
NPHP1-209ENST00000461707 NPM1P06748 294 aaKnown RBP eCLIP9.74□□□□□ -0.85
NPHP1-209ENST00000461707 NGEFQ8N5V2 710 aa9.74□□□□□ -0.85
NPHP1-209ENST00000461707 METP08581 1390 aa9.74□□□□□ -0.85
NPHP1-209ENST00000461707 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
NPHP1-209ENST00000461707 ANKARQ7Z5J8 1434 aa9.73□□□□□ -0.85
NPHP1-209ENST00000461707 SAFB2Q14151 953 aaKnown RBP eCLIP9.73□□□□□ -0.85
NPHP1-209ENST00000461707 PLEKHG2Q9H7P9 1386 aa9.73□□□□□ -0.85
NPHP1-209ENST00000461707 TMEM2Q9UHN6 1383 aa9.73□□□□□ -0.85
NPHP1-209ENST00000461707 SLFN5Q08AF3 891 aa9.72□□□□□ -0.85
NPHP1-209ENST00000461707 CYB5RLQ6IPT4 315 aa9.72□□□□□ -0.85
NPHP1-209ENST00000461707 MRC1P22897 1456 aa9.72□□□□□ -0.85
NPHP1-209ENST00000461707 IDI1Q13907 227 aa9.72□□□□□ -0.85
NPHP1-209ENST00000461707 CRBNQ96SW2 442 aa9.72□□□□□ -0.85
NPHP1-209ENST00000461707 TJP1Q07157 1748 aa9.71□□□□□ -0.85
NPHP1-209ENST00000461707 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
NPHP1-209ENST00000461707 APAF1O14727 1248 aa9.71□□□□□ -0.86
NPHP1-209ENST00000461707 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
NPHP1-209ENST00000461707 A0A1B0GUL6 1792 aa9.7□□□□□ -0.86
NPHP1-209ENST00000461707 KDRP35968 1356 aa9.7□□□□□ -0.86
NPHP1-209ENST00000461707 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
NPHP1-209ENST00000461707 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
NPHP1-209ENST00000461707 WDR43Q15061 677 aaKnown RBP eCLIP9.68□□□□□ -0.86
NPHP1-209ENST00000461707 STK26Q9P289 416 aa9.68□□□□□ -0.86
NPHP1-209ENST00000461707 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
NPHP1-209ENST00000461707 RRP7AQ9Y3A4 280 aaKnown RBP9.68□□□□□ -0.86
NPHP1-209ENST00000461707 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
NPHP1-209ENST00000461707 ROBO2Q9HCK4 1378 aa9.67□□□□□ -0.86
NPHP1-209ENST00000461707 PHLPP1O60346 1717 aa9.67□□□□□ -0.86
NPHP1-209ENST00000461707 BCAR3O75815 825 aa9.67□□□□□ -0.86
NPHP1-209ENST00000461707 NEUROD2Q15784 382 aa9.66□□□□□ -0.86
NPHP1-209ENST00000461707 USP19O94966 1318 aa9.65□□□□□ -0.86
NPHP1-209ENST00000461707 USP6P35125 1406 aa9.65□□□□□ -0.86
NPHP1-209ENST00000461707 CDCA8Q53HL2 280 aa9.65□□□□□ -0.86
NPHP1-209ENST00000461707 SETD1BQ9UPS6 1966 aaKnown RBP9.65□□□□□ -0.86
NPHP1-209ENST00000461707 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
NPHP1-209ENST00000461707 NCOA3Q9Y6Q9 1424 aa9.65□□□□□ -0.86
NPHP1-209ENST00000461707 FBLN1P23142 703 aa9.65□□□□□ -0.87
NPHP1-209ENST00000461707 IL16Q14005 1332 aa9.65□□□□□ -0.87
NPHP1-209ENST00000461707 KIF24Q5T7B8 1368 aa9.64□□□□□ -0.87
NPHP1-209ENST00000461707 ZNF853P0CG23 659 aa9.64□□□□□ -0.87
NPHP1-209ENST00000461707 CRB1P82279 1406 aa9.64□□□□□ -0.87
NPHP1-209ENST00000461707 GOLGA2Q08379 1002 aa9.64□□□□□ -0.87
NPHP1-209ENST00000461707 TNNQ9UQP3 1299 aa9.64□□□□□ -0.87
NPHP1-209ENST00000461707 NRAPQ86VF7 1730 aa9.64□□□□□ -0.87
NPHP1-209ENST00000461707 PXDNLA1KZ92 1463 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 MTHFSP49914 203 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
NPHP1-209ENST00000461707 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 PRR36Q9H6K5 1346 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 LAMB2P55268 1798 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 MORC1Q86VD1 984 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
NPHP1-209ENST00000461707 MLECQ14165 292 aa9.61□□□□□ -0.87
NPHP1-209ENST00000461707 ROBO1Q9Y6N7 1651 aa9.61□□□□□ -0.87
NPHP1-209ENST00000461707 ARFGEF2Q9Y6D5 1785 aa9.61□□□□□ -0.87
NPHP1-209ENST00000461707 ARAP2Q8WZ64 1704 aa9.61□□□□□ -0.87
NPHP1-209ENST00000461707 MINK1Q8N4C8 1332 aaPredicted RBP9.61□□□□□ -0.87
NPHP1-209ENST00000461707 TNRQ92752 1358 aa9.6□□□□□ -0.87
NPHP1-209ENST00000461707 WWC1Q8IX03 1113 aa9.6□□□□□ -0.87
NPHP1-209ENST00000461707 RTL1A6NKG5 1358 aa9.6□□□□□ -0.87
NPHP1-209ENST00000461707 PDE4AP27815 886 aa9.6□□□□□ -0.87
NPHP1-209ENST00000461707 GGNBP2Q9H3C7 697 aa9.6□□□□□ -0.87
NPHP1-209ENST00000461707 DNAJC5Q9H3Z4 198 aa9.6□□□□□ -0.87
NPHP1-209ENST00000461707 WDR63Q8IWG1 891 aa9.59□□□□□ -0.87
NPHP1-209ENST00000461707 PRAM1Q96QH2 718 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms