RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CABLES1Q8TDN4 633 aa14.86□□□□□ -0.03
TRAPPC12-213ENST00000461577 TESK2Q96S53 571 aa14.86□□□□□ -0.03
TRAPPC12-213ENST00000461577 TMF1P82094 1093 aa14.85□□□□□ -0.03
TRAPPC12-213ENST00000461577 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
TRAPPC12-213ENST00000461577 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
TRAPPC12-213ENST00000461577 ABCA3Q99758 1704 aa14.84□□□□□ -0.03
TRAPPC12-213ENST00000461577 AKAP12Q02952 1782 aa14.84□□□□□ -0.03
TRAPPC12-213ENST00000461577 PUS7Q96PZ0 661 aaKnown RBP14.84□□□□□ -0.03
TRAPPC12-213ENST00000461577 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC12-213ENST00000461577 BRD4O60885 1362 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC12-213ENST00000461577 ABTB2Q8N961 1025 aa14.83□□□□□ -0.04
TRAPPC12-213ENST00000461577 USP6P35125 1406 aa14.83□□□□□ -0.04
TRAPPC12-213ENST00000461577 NUTM2GQ5VZR2 741 aa14.82□□□□□ -0.04
TRAPPC12-213ENST00000461577 USP21Q9UK80 565 aa14.82□□□□□ -0.04
TRAPPC12-213ENST00000461577 HDGFL2Q7Z4V5 671 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC12-213ENST00000461577 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-213ENST00000461577 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRAPPC12-213ENST00000461577 CDCA8Q53HL2 280 aa14.8□□□□□ -0.04
TRAPPC12-213ENST00000461577 FNBP4Q8N3X1 1017 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC12-213ENST00000461577 CPSF1Q10570 1443 aaKnown RBP14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 NLRP13Q86W25 1043 aa14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 SLC12A5Q9H2X9 1139 aa14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 QTRT2Q9H974 415 aaKnown RBP14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 PHRF1Q9P1Y6 1649 aaKnown RBP14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
TRAPPC12-213ENST00000461577 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
TRAPPC12-213ENST00000461577 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
TRAPPC12-213ENST00000461577 TTC21BQ7Z4L5 1316 aa14.78□□□□□ -0.04
TRAPPC12-213ENST00000461577 RXRBP28702 533 aa14.78□□□□□ -0.04
TRAPPC12-213ENST00000461577 TRPC5Q9UL62 973 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC12-213ENST00000461577 SSH2Q76I76 1423 aa14.77□□□□□ -0.04
TRAPPC12-213ENST00000461577 TTC21AQ8NDW8 1320 aa14.77□□□□□ -0.04
TRAPPC12-213ENST00000461577 HSPA5P11021 654 aaKnown RBP14.77□□□□□ -0.05
TRAPPC12-213ENST00000461577 NLRP6P59044 892 aa14.77□□□□□ -0.05
TRAPPC12-213ENST00000461577 FAM83GA6ND36 823 aa14.76□□□□□ -0.05
TRAPPC12-213ENST00000461577 PIK3C2AO00443 1686 aa14.76□□□□□ -0.05
TRAPPC12-213ENST00000461577 PLCH1Q4KWH8 1693 aa14.76□□□□□ -0.05
TRAPPC12-213ENST00000461577 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
TRAPPC12-213ENST00000461577 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
TRAPPC12-213ENST00000461577 COL14A1Q05707 1796 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 NWD2Q9ULI1 1742 aa14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 USP19O94966 1318 aa14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 ZC3H6P61129 1189 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 RBM6P78332 1123 aaKnown RBP14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 PRDM11Q9NQV5 511 aa14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 SLIT2O94813 1529 aa14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 BCL9LQ86UU0 1499 aa14.75□□□□□ -0.05
TRAPPC12-213ENST00000461577 A0A1W2PP64 1363 aa14.74□□□□□ -0.05
TRAPPC12-213ENST00000461577 POLR3GLQ9BT43 218 aa14.74□□□□□ -0.05
TRAPPC12-213ENST00000461577 ATRNO75882 1429 aa14.74□□□□□ -0.05
TRAPPC12-213ENST00000461577 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
TRAPPC12-213ENST00000461577 SOCS7O14512 581 aa14.73□□□□□ -0.05
TRAPPC12-213ENST00000461577 EDC4Q6P2E9 1401 aaKnown RBP14.73□□□□□ -0.05
TRAPPC12-213ENST00000461577 GCP02774 474 aa14.72□□□□□ -0.05
TRAPPC12-213ENST00000461577 BTG4Q9NY30 223 aa14.72□□□□□ -0.05
TRAPPC12-213ENST00000461577 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
TRAPPC12-213ENST00000461577 ANKRD36BQ8N2N9 1353 aa14.72□□□□□ -0.05
TRAPPC12-213ENST00000461577 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
TRAPPC12-213ENST00000461577 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
TRAPPC12-213ENST00000461577 SLIT3O75094 1523 aa14.71□□□□□ -0.06
TRAPPC12-213ENST00000461577 CDK12Q9NYV4 1490 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC12-213ENST00000461577 NRAPQ86VF7 1730 aa14.7□□□□□ -0.06
TRAPPC12-213ENST00000461577 NME9Q86XW9 330 aa14.7□□□□□ -0.06
TRAPPC12-213ENST00000461577 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
TRAPPC12-213ENST00000461577 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC12-213ENST00000461577 SOX12O15370 315 aa14.69□□□□□ -0.06
TRAPPC12-213ENST00000461577 VPS72Q15906 364 aa14.69□□□□□ -0.06
TRAPPC12-213ENST00000461577 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
TRAPPC12-213ENST00000461577 CPDO75976 1380 aa14.69□□□□□ -0.06
TRAPPC12-213ENST00000461577 MYOM1P52179 1685 aa14.68□□□□□ -0.06
TRAPPC12-213ENST00000461577 USP31Q70CQ4 1352 aa14.68□□□□□ -0.06
TRAPPC12-213ENST00000461577 EVA1CP58658 441 aa14.67□□□□□ -0.06
TRAPPC12-213ENST00000461577 STRN4Q9NRL3 753 aa14.67□□□□□ -0.06
TRAPPC12-213ENST00000461577 USP54Q70EL1 1684 aa14.67□□□□□ -0.06
TRAPPC12-213ENST00000461577 RGS12O14924 1447 aa14.66□□□□□ -0.06
TRAPPC12-213ENST00000461577 GLI3P10071 1580 aa14.65□□□□□ -0.06
TRAPPC12-213ENST00000461577 COG3Q96JB2 828 aa14.65□□□□□ -0.06
TRAPPC12-213ENST00000461577 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.06
TRAPPC12-213ENST00000461577 CAMTA1Q9Y6Y1 1673 aa14.64□□□□□ -0.07
TRAPPC12-213ENST00000461577 KIF20BQ96Q89 1820 aa14.64□□□□□ -0.07
TRAPPC12-213ENST00000461577 AATKQ6ZMQ8 1374 aa14.63□□□□□ -0.07
TRAPPC12-213ENST00000461577 NFAT5O94916 1531 aa14.63□□□□□ -0.07
TRAPPC12-213ENST00000461577 ARHGEF25Q86VW2 580 aa14.63□□□□□ -0.07
TRAPPC12-213ENST00000461577 OVOS2A0A0J9YW53 1432 aa14.63□□□□□ -0.07
TRAPPC12-213ENST00000461577 OVOS2Q6IE36 1432 aa14.63□□□□□ -0.07
TRAPPC12-213ENST00000461577 NSD3Q9BZ95 1437 aa14.63□□□□□ -0.07
TRAPPC12-213ENST00000461577 A0A0G2JS52 829 aa14.62□□□□□ -0.07
TRAPPC12-213ENST00000461577 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-213ENST00000461577 MYT1Q01538 1121 aa14.62□□□□□ -0.07
TRAPPC12-213ENST00000461577 SPATA31A5Q5VU36 1347 aa14.62□□□□□ -0.07
TRAPPC12-213ENST00000461577 SPATA31A7Q8IWB4 1347 aa14.62□□□□□ -0.07
TRAPPC12-213ENST00000461577 LTN1O94822 1766 aa14.61□□□□□ -0.07
TRAPPC12-213ENST00000461577 COL18A1P39060 1754 aa14.61□□□□□ -0.07
TRAPPC12-213ENST00000461577 FYB1O15117 783 aa14.61□□□□□ -0.07
TRAPPC12-213ENST00000461577 CARD14Q9BXL6 1004 aa14.61□□□□□ -0.07
TRAPPC12-213ENST00000461577 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms