RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 DESI1Q6ICB0 168 aa11.31□□□□□ -0.6
CFHR3-204ENST00000461558 LORP23490 312 aaPredicted RBP11.3□□□□□ -0.6
CFHR3-204ENST00000461558 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
CFHR3-204ENST00000461558 ZFP42Q96MM3 310 aa11.3□□□□□ -0.6
CFHR3-204ENST00000461558 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CFHR3-204ENST00000461558 GJA5P36382 358 aa11.29□□□□□ -0.6
CFHR3-204ENST00000461558 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
CFHR3-204ENST00000461558 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
CFHR3-204ENST00000461558 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
CFHR3-204ENST00000461558 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
CFHR3-204ENST00000461558 BAP1Q92560 729 aa11.28□□□□□ -0.6
CFHR3-204ENST00000461558 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
CFHR3-204ENST00000461558 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
CFHR3-204ENST00000461558 ERBB4Q15303 1308 aa11.27□□□□□ -0.61
CFHR3-204ENST00000461558 TRIM66O15016 1216 aa11.25□□□□□ -0.61
CFHR3-204ENST00000461558 VARSP26640 1264 aaKnown RBP11.25□□□□□ -0.61
CFHR3-204ENST00000461558 NNTQ13423 1086 aa11.25□□□□□ -0.61
CFHR3-204ENST00000461558 SCARF1Q14162 830 aa11.24□□□□□ -0.61
CFHR3-204ENST00000461558 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
CFHR3-204ENST00000461558 PCDHB15Q9Y5E8 787 aa11.24□□□□□ -0.61
CFHR3-204ENST00000461558 SPTLC1O15269 473 aa11.23□□□□□ -0.61
CFHR3-204ENST00000461558 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
CFHR3-204ENST00000461558 MPNDQ8N594 471 aa11.23□□□□□ -0.61
CFHR3-204ENST00000461558 CFAP99D6REC4 459 aa11.22□□□□□ -0.61
CFHR3-204ENST00000461558 ADH1CP00326 375 aa11.21□□□□□ -0.61
CFHR3-204ENST00000461558 CTHP32929 405 aa11.21□□□□□ -0.61
CFHR3-204ENST00000461558 AK7Q96M32 723 aa11.21□□□□□ -0.61
CFHR3-204ENST00000461558 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.61
CFHR3-204ENST00000461558 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
CFHR3-204ENST00000461558 TIMP2P16035 220 aa11.2□□□□□ -0.62
CFHR3-204ENST00000461558 HRCP23327 699 aa11.2□□□□□ -0.62
CFHR3-204ENST00000461558 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
CFHR3-204ENST00000461558 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
CFHR3-204ENST00000461558 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
CFHR3-204ENST00000461558 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
CFHR3-204ENST00000461558 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
CFHR3-204ENST00000461558 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
CFHR3-204ENST00000461558 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
CFHR3-204ENST00000461558 VSIG8P0DPA2 414 aa11.16□□□□□ -0.62
CFHR3-204ENST00000461558 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
CFHR3-204ENST00000461558 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
CFHR3-204ENST00000461558 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
CFHR3-204ENST00000461558 KLF16Q9BXK1 252 aaPredicted RBP11.13□□□□□ -0.63
CFHR3-204ENST00000461558 PER1O15534 1290 aaPredicted RBP11.12□□□□□ -0.63
CFHR3-204ENST00000461558 PDE4DQ08499 809 aa11.12□□□□□ -0.63
CFHR3-204ENST00000461558 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
CFHR3-204ENST00000461558 CDK15Q96Q40 435 aa11.12□□□□□ -0.63
CFHR3-204ENST00000461558 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
CFHR3-204ENST00000461558 ZIC2O95409 532 aaPredicted RBP11.11□□□□□ -0.63
CFHR3-204ENST00000461558 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
CFHR3-204ENST00000461558 QPCTQ16769 361 aa11.11□□□□□ -0.63
CFHR3-204ENST00000461558 MAN1A2O60476 641 aa11.1□□□□□ -0.63
CFHR3-204ENST00000461558 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
CFHR3-204ENST00000461558 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
CFHR3-204ENST00000461558 TSC1Q92574 1164 aa11.09□□□□□ -0.63
CFHR3-204ENST00000461558 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
CFHR3-204ENST00000461558 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
CFHR3-204ENST00000461558 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
CFHR3-204ENST00000461558 NR5A1Q13285 461 aa11.08□□□□□ -0.64
CFHR3-204ENST00000461558 AGERQ15109 404 aa11.08□□□□□ -0.64
CFHR3-204ENST00000461558 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
CFHR3-204ENST00000461558 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
CFHR3-204ENST00000461558 BPHLQ86WA6 291 aaPredicted RBP11.08□□□□□ -0.64
CFHR3-204ENST00000461558 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
CFHR3-204ENST00000461558 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
CFHR3-204ENST00000461558 LILRB3O75022 631 aa11.07□□□□□ -0.64
CFHR3-204ENST00000461558 SUZ12Q15022 739 aaKnown RBP11.07□□□□□ -0.64
CFHR3-204ENST00000461558 UPP2O95045 317 aa11.06□□□□□ -0.64
CFHR3-204ENST00000461558 NR3C2P08235 984 aa11.05□□□□□ -0.64
CFHR3-204ENST00000461558 PPFIA3O75145 1194 aa11.04□□□□□ -0.64
CFHR3-204ENST00000461558 BMP2P12643 396 aa11.04□□□□□ -0.64
CFHR3-204ENST00000461558 GRM5P41594 1212 aa11.04□□□□□ -0.64
CFHR3-204ENST00000461558 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
CFHR3-204ENST00000461558 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
CFHR3-204ENST00000461558 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
CFHR3-204ENST00000461558 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
CFHR3-204ENST00000461558 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
CFHR3-204ENST00000461558 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.65
CFHR3-204ENST00000461558 KCNMA1Q12791 1236 aa11.02□□□□□ -0.65
CFHR3-204ENST00000461558 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
CFHR3-204ENST00000461558 NBPF14Q5TI25 921 aa11.02□□□□□ -0.65
CFHR3-204ENST00000461558 SH3RF1Q7Z6J0 888 aa11.02□□□□□ -0.65
CFHR3-204ENST00000461558 MEIOBQ8N635 442 aa11.01□□□□□ -0.65
CFHR3-204ENST00000461558 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
CFHR3-204ENST00000461558 MAP4K5Q9Y4K4 846 aa10.99□□□□□ -0.65
CFHR3-204ENST00000461558 FSHRP23945 695 aa10.98□□□□□ -0.65
CFHR3-204ENST00000461558 TRMT44Q8IYL2 757 aaKnown RBP10.98□□□□□ -0.65
CFHR3-204ENST00000461558 RSPH6AQ9H0K4 717 aa10.98□□□□□ -0.65
CFHR3-204ENST00000461558 DNMT3LQ9UJW3 386 aa10.98□□□□□ -0.65
CFHR3-204ENST00000461558 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
CFHR3-204ENST00000461558 POLR3EQ9NVU0 708 aa10.97□□□□□ -0.65
CFHR3-204ENST00000461558 MAGEB6P1A0A0J9YX57 407 aa10.96□□□□□ -0.65
CFHR3-204ENST00000461558 VASH1Q7L8A9 365 aaPredicted RBP10.96□□□□□ -0.65
CFHR3-204ENST00000461558 KCTD17Q8N5Z5 321 aa10.96□□□□□ -0.65
CFHR3-204ENST00000461558 TSEN34Q9BSV6 310 aaKnown RBP10.95□□□□□ -0.66
CFHR3-204ENST00000461558 GSK3AP49840 483 aa10.94□□□□□ -0.66
CFHR3-204ENST00000461558 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.66
CFHR3-204ENST00000461558 RNF225M0QZC1 329 aaPredicted RBP10.93□□□□□ -0.66
CFHR3-204ENST00000461558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.93□□□□□ -0.66
CFHR3-204ENST00000461558 CARD14Q9BXL6 1004 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms