RNA–Protein interactions for RNA: ENST00000461490.1

PDE6B-204, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-204ENST00000461490 PSEN1P49768 467 aa10.16□□□□□ -0.78
PDE6B-204ENST00000461490 C19orf44Q9H6X5 657 aa10.16□□□□□ -0.78
PDE6B-204ENST00000461490 NCOA3Q9Y6Q9 1424 aa10.16□□□□□ -0.78
PDE6B-204ENST00000461490 PIK3R4Q99570 1358 aa10.15□□□□□ -0.78
PDE6B-204ENST00000461490 CADPS2Q86UW7 1296 aa10.15□□□□□ -0.78
PDE6B-204ENST00000461490 RGS17Q9UGC6 210 aaPredicted RBP10.15□□□□□ -0.78
PDE6B-204ENST00000461490 NEXMIFQ5QGS0 1516 aa10.15□□□□□ -0.78
PDE6B-204ENST00000461490 METP08581 1390 aa10.14□□□□□ -0.79
PDE6B-204ENST00000461490 HFM1A2PYH4 1435 aa10.14□□□□□ -0.79
PDE6B-204ENST00000461490 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
PDE6B-204ENST00000461490 XRN1Q8IZH2 1706 aaKnown RBP10.13□□□□□ -0.79
PDE6B-204ENST00000461490 PPLO60437 1756 aa10.13□□□□□ -0.79
PDE6B-204ENST00000461490 COL16A1Q07092 1604 aaPredicted RBP10.12□□□□□ -0.79
PDE6B-204ENST00000461490 CHRM1P11229 460 aaPredicted RBP10.12□□□□□ -0.79
PDE6B-204ENST00000461490 RGL3Q3MIN7 710 aa10.12□□□□□ -0.79
PDE6B-204ENST00000461490 ZSWIM6Q9HCJ5 1215 aa10.12□□□□□ -0.79
PDE6B-204ENST00000461490 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
PDE6B-204ENST00000461490 MEX3CQ5U5Q3 659 aaKnown RBP10.11□□□□□ -0.79
PDE6B-204ENST00000461490 POTEAQ6S8J7 498 aa10.11□□□□□ -0.79
PDE6B-204ENST00000461490 JCADQ9P266 1359 aa10.11□□□□□ -0.79
PDE6B-204ENST00000461490 NALCNQ8IZF0 1738 aa10.1□□□□□ -0.79
PDE6B-204ENST00000461490 RPGRIP1LQ68CZ1 1315 aa10.1□□□□□ -0.79
PDE6B-204ENST00000461490 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
PDE6B-204ENST00000461490 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
PDE6B-204ENST00000461490 BRINP3Q76B58 766 aa10.1□□□□□ -0.79
PDE6B-204ENST00000461490 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
PDE6B-204ENST00000461490 SETD1AO15047 1707 aaKnown RBP10.1□□□□□ -0.79
PDE6B-204ENST00000461490 GSE1Q14687 1217 aa10.09□□□□□ -0.79
PDE6B-204ENST00000461490 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
PDE6B-204ENST00000461490 MPHOSPH9Q99550 1183 aa10.09□□□□□ -0.79
PDE6B-204ENST00000461490 AHDC1Q5TGY3 1603 aaPredicted RBP10.08□□□□□ -0.8
PDE6B-204ENST00000461490 SHPRHQ149N8 1683 aa10.08□□□□□ -0.8
PDE6B-204ENST00000461490 STK26Q9P289 416 aa10.07□□□□□ -0.8
PDE6B-204ENST00000461490 ASXL1Q8IXJ9 1541 aa10.07□□□□□ -0.8
PDE6B-204ENST00000461490 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
PDE6B-204ENST00000461490 MST1RQ04912 1400 aa10.07□□□□□ -0.8
PDE6B-204ENST00000461490 ADGRF5Q8IZF2 1346 aa10.07□□□□□ -0.8
PDE6B-204ENST00000461490 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
PDE6B-204ENST00000461490 GPR153Q6NV75 609 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 LRP6O75581 1613 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 NHSL1Q5SYE7 1610 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 DCCP43146 1447 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 ADGRL3Q9HAR2 1447 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 SPATA31A6Q5VVP1 1343 aa10.06□□□□□ -0.8
PDE6B-204ENST00000461490 IFT172Q9UG01 1749 aa10.05□□□□□ -0.8
PDE6B-204ENST00000461490 ROBO2Q9HCK4 1378 aa10.05□□□□□ -0.8
PDE6B-204ENST00000461490 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
PDE6B-204ENST00000461490 TMEM132EQ6IEE7 984 aa10.04□□□□□ -0.8
PDE6B-204ENST00000461490 ORAI2Q96SN7 254 aa10.04□□□□□ -0.8
PDE6B-204ENST00000461490 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
PDE6B-204ENST00000461490 SETD5Q9C0A6 1442 aa10.04□□□□□ -0.8
PDE6B-204ENST00000461490 NUTM2FA1L443 756 aa10.03□□□□□ -0.8
PDE6B-204ENST00000461490 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
PDE6B-204ENST00000461490 LRRC59Q96AG4 307 aaKnown RBP10.03□□□□□ -0.8
PDE6B-204ENST00000461490 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
PDE6B-204ENST00000461490 C1orf167Q5SNV9 1468 aa10.02□□□□□ -0.81
PDE6B-204ENST00000461490 PTCH1Q13635 1447 aa10.01□□□□□ -0.81
PDE6B-204ENST00000461490 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
PDE6B-204ENST00000461490 ESCO1Q5FWF5 840 aa10.01□□□□□ -0.81
PDE6B-204ENST00000461490 ZNF772Q68DY9 489 aaPredicted RBP10.01□□□□□ -0.81
PDE6B-204ENST00000461490 C8orf37Q96NL8 207 aa10.01□□□□□ -0.81
PDE6B-204ENST00000461490 RAB3GAP2Q9H2M9 1393 aa10.01□□□□□ -0.81
PDE6B-204ENST00000461490 ADAMTS2O95450 1211 aa10□□□□□ -0.81
PDE6B-204ENST00000461490 AFF2P51816 1311 aa10□□□□□ -0.81
PDE6B-204ENST00000461490 ANKRD30BQ9BXX2 1392 aa10□□□□□ -0.81
PDE6B-204ENST00000461490 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.81
PDE6B-204ENST00000461490 XPCQ01831 940 aaPredicted RBP9.99□□□□□ -0.81
PDE6B-204ENST00000461490 PNPLA6Q8IY17 1366 aa9.99□□□□□ -0.81
PDE6B-204ENST00000461490 PLEKHH1Q9ULM0 1364 aa9.99□□□□□ -0.81
PDE6B-204ENST00000461490 RXRBP28702 533 aa9.98□□□□□ -0.81
PDE6B-204ENST00000461490 SAFB2Q14151 953 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDE6B-204ENST00000461490 CFAP70Q5T0N1 1121 aa9.98□□□□□ -0.81
PDE6B-204ENST00000461490 TMEM92Q6UXU6 159 aa9.98□□□□□ -0.81
PDE6B-204ENST00000461490 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
PDE6B-204ENST00000461490 KNDC1Q76NI1 1749 aa9.98□□□□□ -0.81
PDE6B-204ENST00000461490 FOXO3O43524 673 aa9.97□□□□□ -0.81
PDE6B-204ENST00000461490 NGLY1Q96IV0 654 aa9.97□□□□□ -0.81
PDE6B-204ENST00000461490 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
PDE6B-204ENST00000461490 LRPPRCP42704 1394 aaKnown RBP9.97□□□□□ -0.81
PDE6B-204ENST00000461490 SOS2Q07890 1332 aaPredicted RBP9.96□□□□□ -0.82
PDE6B-204ENST00000461490 PIK3C2GO75747 1445 aa9.96□□□□□ -0.82
PDE6B-204ENST00000461490 YTHDC2Q9H6S0 1430 aaKnown RBP9.96□□□□□ -0.82
PDE6B-204ENST00000461490 LAMC1P11047 1609 aa9.96□□□□□ -0.82
PDE6B-204ENST00000461490 HRCP23327 699 aa9.95□□□□□ -0.82
PDE6B-204ENST00000461490 C14orf93Q9H972 538 aaKnown RBP9.95□□□□□ -0.82
PDE6B-204ENST00000461490 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
PDE6B-204ENST00000461490 PRAG1Q86YV5 1406 aa9.95□□□□□ -0.82
PDE6B-204ENST00000461490 CDC42BPGQ6DT37 1551 aa9.95□□□□□ -0.82
PDE6B-204ENST00000461490 FMN2Q9NZ56 1722 aa9.95□□□□□ -0.82
PDE6B-204ENST00000461490 MARF1Q9Y4F3 1742 aaKnown RBP9.94□□□□□ -0.82
PDE6B-204ENST00000461490 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
PDE6B-204ENST00000461490 NPHP3Q7Z494 1330 aa9.94□□□□□ -0.82
PDE6B-204ENST00000461490 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
PDE6B-204ENST00000461490 HCSTQ9UBK5 93 aa9.94□□□□□ -0.82
PDE6B-204ENST00000461490 TECPR2O15040 1411 aa9.93□□□□□ -0.82
PDE6B-204ENST00000461490 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
PDE6B-204ENST00000461490 DCAF11Q8TEB1 546 aa9.93□□□□□ -0.82
PDE6B-204ENST00000461490 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
PDE6B-204ENST00000461490 PRAM1Q96QH2 718 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms