RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 PLEKHG3A1L390 1219 aa14.31□□□□□ -0.12
SYN3-206ENST00000461446 RGS12O14924 1447 aa14.31□□□□□ -0.12
SYN3-206ENST00000461446 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
SYN3-206ENST00000461446 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
SYN3-206ENST00000461446 FAM83GA6ND36 823 aa14.3□□□□□ -0.12
SYN3-206ENST00000461446 NUTM2GQ5VZR2 741 aa14.3□□□□□ -0.12
SYN3-206ENST00000461446 POLR3AO14802 1390 aaPredicted RBP14.3□□□□□ -0.12
SYN3-206ENST00000461446 CDK12Q9NYV4 1490 aaPredicted RBP14.3□□□□□ -0.12
SYN3-206ENST00000461446 ST20-MTHFSA0A0A6YYL1 179 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 UNC5CLQ8IV45 518 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 CABP1Q9NZU7 370 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 USP47Q96K76 1375 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 SLIT2O94813 1529 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 ABCA3Q99758 1704 aa14.29□□□□□ -0.12
SYN3-206ENST00000461446 EVC2Q86UK5 1308 aa14.28□□□□□ -0.12
SYN3-206ENST00000461446 GJD4Q96KN9 370 aaPredicted RBP14.27□□□□□ -0.13
SYN3-206ENST00000461446 SBNO2Q9Y2G9 1366 aa14.26□□□□□ -0.13
SYN3-206ENST00000461446 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
SYN3-206ENST00000461446 UPF1Q92900 1129 aaKnown RBP eCLIP14.26□□□□□ -0.13
SYN3-206ENST00000461446 SLC24A1O60721 1099 aa14.25□□□□□ -0.13
SYN3-206ENST00000461446 ABTB2Q8N961 1025 aa14.25□□□□□ -0.13
SYN3-206ENST00000461446 TESK2Q96S53 571 aa14.25□□□□□ -0.13
SYN3-206ENST00000461446 BTG4Q9NY30 223 aa14.24□□□□□ -0.13
SYN3-206ENST00000461446 PLCH1Q4KWH8 1693 aa14.23□□□□□ -0.13
SYN3-206ENST00000461446 HSPA5P11021 654 aaKnown RBP14.23□□□□□ -0.13
SYN3-206ENST00000461446 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
SYN3-206ENST00000461446 CHRNA2Q15822 529 aa14.23□□□□□ -0.13
SYN3-206ENST00000461446 PRDM11Q9NQV5 511 aa14.23□□□□□ -0.13
SYN3-206ENST00000461446 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
SYN3-206ENST00000461446 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.23□□□□□ -0.13
SYN3-206ENST00000461446 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
SYN3-206ENST00000461446 GLI3P10071 1580 aa14.22□□□□□ -0.13
SYN3-206ENST00000461446 VPS72Q15906 364 aa14.22□□□□□ -0.13
SYN3-206ENST00000461446 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
SYN3-206ENST00000461446 USP6P35125 1406 aa14.21□□□□□ -0.13
SYN3-206ENST00000461446 NWD2Q9ULI1 1742 aa14.21□□□□□ -0.14
SYN3-206ENST00000461446 TMF1P82094 1093 aa14.19□□□□□ -0.14
SYN3-206ENST00000461446 NLRP13Q86W25 1043 aa14.19□□□□□ -0.14
SYN3-206ENST00000461446 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
SYN3-206ENST00000461446 ATAD2Q6PL18 1390 aa14.19□□□□□ -0.14
SYN3-206ENST00000461446 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
SYN3-206ENST00000461446 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
SYN3-206ENST00000461446 USP19O94966 1318 aa14.18□□□□□ -0.14
SYN3-206ENST00000461446 SSH2Q76I76 1423 aa14.18□□□□□ -0.14
SYN3-206ENST00000461446 NLRP6P59044 892 aa14.18□□□□□ -0.14
SYN3-206ENST00000461446 SEPT12Q8IYM1 358 aa14.18□□□□□ -0.14
SYN3-206ENST00000461446 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
SYN3-206ENST00000461446 GCP02774 474 aa14.17□□□□□ -0.14
SYN3-206ENST00000461446 TMC1Q8TDI8 760 aa14.17□□□□□ -0.14
SYN3-206ENST00000461446 SLC12A5Q9H2X9 1139 aa14.17□□□□□ -0.14
SYN3-206ENST00000461446 STRN4Q9NRL3 753 aa14.17□□□□□ -0.14
SYN3-206ENST00000461446 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
SYN3-206ENST00000461446 FAM98CQ17RN3 349 aaKnown RBP14.16□□□□□ -0.14
SYN3-206ENST00000461446 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
SYN3-206ENST00000461446 BRD4O60885 1362 aaPredicted RBP14.16□□□□□ -0.14
SYN3-206ENST00000461446 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
SYN3-206ENST00000461446 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
SYN3-206ENST00000461446 KTN1Q86UP2 1357 aaKnown RBP14.15□□□□□ -0.14
SYN3-206ENST00000461446 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
SYN3-206ENST00000461446 ONECUT3O60422 494 aaPredicted RBP14.15□□□□□ -0.14
SYN3-206ENST00000461446 CDCA8Q53HL2 280 aa14.15□□□□□ -0.14
SYN3-206ENST00000461446 SPATA31A5Q5VU36 1347 aa14.15□□□□□ -0.15
SYN3-206ENST00000461446 SPATA31A7Q8IWB4 1347 aa14.15□□□□□ -0.15
SYN3-206ENST00000461446 A0A0G2JS52 829 aa14.14□□□□□ -0.15
SYN3-206ENST00000461446 MYT1Q01538 1121 aa14.14□□□□□ -0.15
SYN3-206ENST00000461446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.14□□□□□ -0.15
SYN3-206ENST00000461446 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
SYN3-206ENST00000461446 PIK3C2AO00443 1686 aa14.14□□□□□ -0.15
SYN3-206ENST00000461446 BRWD3Q6RI45 1802 aa14.13□□□□□ -0.15
SYN3-206ENST00000461446 CPDO75976 1380 aa14.13□□□□□ -0.15
SYN3-206ENST00000461446 SOX12O15370 315 aa14.13□□□□□ -0.15
SYN3-206ENST00000461446 EVA1CP58658 441 aa14.13□□□□□ -0.15
SYN3-206ENST00000461446 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
SYN3-206ENST00000461446 CAMTA1Q9Y6Y1 1673 aa14.13□□□□□ -0.15
SYN3-206ENST00000461446 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
SYN3-206ENST00000461446 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
SYN3-206ENST00000461446 LARP1Q6PKG0 1096 aaKnown RBP14.12□□□□□ -0.15
SYN3-206ENST00000461446 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
SYN3-206ENST00000461446 KRT27Q7Z3Y8 459 aa14.11□□□□□ -0.15
SYN3-206ENST00000461446 NME9Q86XW9 330 aa14.11□□□□□ -0.15
SYN3-206ENST00000461446 SPATA31A1Q5TZJ5 1347 aa14.11□□□□□ -0.15
SYN3-206ENST00000461446 TTC21AQ8NDW8 1320 aa14.11□□□□□ -0.15
SYN3-206ENST00000461446 SLIT3O75094 1523 aa14.1□□□□□ -0.15
SYN3-206ENST00000461446 MON2Q7Z3U7 1717 aa14.1□□□□□ -0.15
SYN3-206ENST00000461446 EP400Q96L91 3159 aa14.09□□□□□ -0.15
SYN3-206ENST00000461446 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
SYN3-206ENST00000461446 HDGFL2Q7Z4V5 671 aaPredicted RBP14.09□□□□□ -0.15
SYN3-206ENST00000461446 LMO7Q8WWI1 1683 aa14.09□□□□□ -0.15
SYN3-206ENST00000461446 A0A1W2PP64 1363 aa14.09□□□□□ -0.15
SYN3-206ENST00000461446 NINLQ9Y2I6 1382 aa14.09□□□□□ -0.15
SYN3-206ENST00000461446 TERF2IPQ9NYB0 399 aa14.08□□□□□ -0.16
SYN3-206ENST00000461446 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.16
SYN3-206ENST00000461446 ARHGEF25Q86VW2 580 aa14.07□□□□□ -0.16
SYN3-206ENST00000461446 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
SYN3-206ENST00000461446 AATKQ6ZMQ8 1374 aa14.07□□□□□ -0.16
SYN3-206ENST00000461446 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
SYN3-206ENST00000461446 KCNH5Q8NCM2 988 aa14.06□□□□□ -0.16
SYN3-206ENST00000461446 KIF7Q2M1P5 1343 aa14.06□□□□□ -0.16
SYN3-206ENST00000461446 THSD7AQ9UPZ6 1657 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms