RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
PDGFRA-202ENST00000461294 HSPA6P17066 643 aa12.17□□□□□ -0.46
PDGFRA-202ENST00000461294 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
PDGFRA-202ENST00000461294 COL14A1Q05707 1796 aaKnown RBP12.17□□□□□ -0.46
PDGFRA-202ENST00000461294 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
PDGFRA-202ENST00000461294 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
PDGFRA-202ENST00000461294 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
PDGFRA-202ENST00000461294 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
PDGFRA-202ENST00000461294 SPATA31A1Q5TZJ5 1347 aa12.15□□□□□ -0.46
PDGFRA-202ENST00000461294 VGFO15240 615 aaPredicted RBP12.15□□□□□ -0.46
PDGFRA-202ENST00000461294 PDE3BQ13370 1112 aa12.15□□□□□ -0.46
PDGFRA-202ENST00000461294 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
PDGFRA-202ENST00000461294 GPR162Q16538 588 aa12.14□□□□□ -0.47
PDGFRA-202ENST00000461294 DLC1Q96QB1 1528 aa12.14□□□□□ -0.47
PDGFRA-202ENST00000461294 PLSCR1O15162 318 aa12.13□□□□□ -0.47
PDGFRA-202ENST00000461294 SLC34A2O95436 690 aa12.13□□□□□ -0.47
PDGFRA-202ENST00000461294 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
PDGFRA-202ENST00000461294 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
PDGFRA-202ENST00000461294 SHANK3Q9BYB0 1731 aa12.13□□□□□ -0.47
PDGFRA-202ENST00000461294 CCER1Q8TC90 406 aaPredicted RBP12.12□□□□□ -0.47
PDGFRA-202ENST00000461294 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
PDGFRA-202ENST00000461294 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
PDGFRA-202ENST00000461294 C11orf95C9JLR9 678 aaPredicted RBP12.11□□□□□ -0.47
PDGFRA-202ENST00000461294 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
PDGFRA-202ENST00000461294 SGIP1Q9BQI5 828 aa12.11□□□□□ -0.47
PDGFRA-202ENST00000461294 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
PDGFRA-202ENST00000461294 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
PDGFRA-202ENST00000461294 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
PDGFRA-202ENST00000461294 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
PDGFRA-202ENST00000461294 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
PDGFRA-202ENST00000461294 CAPN15O75808 1086 aa12.09□□□□□ -0.47
PDGFRA-202ENST00000461294 ARXQ96QS3 562 aa12.09□□□□□ -0.47
PDGFRA-202ENST00000461294 PRELPP51888 382 aa12.08□□□□□ -0.48
PDGFRA-202ENST00000461294 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
PDGFRA-202ENST00000461294 KIF1BO60333 1816 aa12.07□□□□□ -0.48
PDGFRA-202ENST00000461294 STAC3Q96MF2 364 aa12.07□□□□□ -0.48
PDGFRA-202ENST00000461294 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
PDGFRA-202ENST00000461294 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
PDGFRA-202ENST00000461294 RPGRIP1LQ68CZ1 1315 aa12.07□□□□□ -0.48
PDGFRA-202ENST00000461294 COL13A1Q5TAT6 717 aaPredicted RBP12.06□□□□□ -0.48
PDGFRA-202ENST00000461294 PROM2Q8N271 834 aa12.06□□□□□ -0.48
PDGFRA-202ENST00000461294 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
PDGFRA-202ENST00000461294 TECPR2O15040 1411 aa12.05□□□□□ -0.48
PDGFRA-202ENST00000461294 STRN4Q9NRL3 753 aa12.05□□□□□ -0.48
PDGFRA-202ENST00000461294 STK32BQ9NY57 414 aa12.05□□□□□ -0.48
PDGFRA-202ENST00000461294 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
PDGFRA-202ENST00000461294 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
PDGFRA-202ENST00000461294 GOLGB1Q14789 3259 aaKnown RBP12.04□□□□□ -0.48
PDGFRA-202ENST00000461294 SLC15A2Q16348 729 aa12.04□□□□□ -0.48
PDGFRA-202ENST00000461294 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
PDGFRA-202ENST00000461294 STK26Q9P289 416 aa12.04□□□□□ -0.48
PDGFRA-202ENST00000461294 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
PDGFRA-202ENST00000461294 CLTCL1P53675 1640 aa12.04□□□□□ -0.48
PDGFRA-202ENST00000461294 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
PDGFRA-202ENST00000461294 DNAJC5GQ8N7S2 189 aa12.03□□□□□ -0.48
PDGFRA-202ENST00000461294 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
PDGFRA-202ENST00000461294 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
PDGFRA-202ENST00000461294 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
PDGFRA-202ENST00000461294 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.49
PDGFRA-202ENST00000461294 TCP11L2Q8N4U5 519 aa12.02□□□□□ -0.49
PDGFRA-202ENST00000461294 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
PDGFRA-202ENST00000461294 ALS2Q96Q42 1657 aa12.02□□□□□ -0.49
PDGFRA-202ENST00000461294 ATP10DQ9P241 1426 aa12.02□□□□□ -0.49
PDGFRA-202ENST00000461294 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
PDGFRA-202ENST00000461294 GRIN3BO60391 1043 aa12.01□□□□□ -0.49
PDGFRA-202ENST00000461294 APLP1P51693 650 aa12.01□□□□□ -0.49
PDGFRA-202ENST00000461294 EVA1CP58658 441 aa12.01□□□□□ -0.49
PDGFRA-202ENST00000461294 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
PDGFRA-202ENST00000461294 TNS4Q8IZW8 715 aa12.01□□□□□ -0.49
PDGFRA-202ENST00000461294 IFT172Q9UG01 1749 aa12□□□□□ -0.49
PDGFRA-202ENST00000461294 CHRNA2Q15822 529 aa12□□□□□ -0.49
PDGFRA-202ENST00000461294 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
PDGFRA-202ENST00000461294 THRAP3Q9Y2W1 955 aaKnown RBP12□□□□□ -0.49
PDGFRA-202ENST00000461294 KIAA0232Q92628 1395 aa12□□□□□ -0.49
PDGFRA-202ENST00000461294 TONSLQ96HA7 1378 aa12□□□□□ -0.49
PDGFRA-202ENST00000461294 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
PDGFRA-202ENST00000461294 SIRT1Q96EB6 747 aa11.99□□□□□ -0.49
PDGFRA-202ENST00000461294 OVOS2A0A0G2JMS6 1433 aa11.99□□□□□ -0.49
PDGFRA-202ENST00000461294 OVOS2A0A0J9YW53 1432 aa11.99□□□□□ -0.49
PDGFRA-202ENST00000461294 OVOS2Q6IE36 1432 aa11.99□□□□□ -0.49
PDGFRA-202ENST00000461294 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
PDGFRA-202ENST00000461294 PPLO60437 1756 aa11.98□□□□□ -0.49
PDGFRA-202ENST00000461294 GPRASP1Q5JY77 1395 aa11.98□□□□□ -0.49
PDGFRA-202ENST00000461294 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
PDGFRA-202ENST00000461294 PTF1AQ7RTS3 328 aa11.98□□□□□ -0.49
PDGFRA-202ENST00000461294 KNDC1Q76NI1 1749 aa11.97□□□□□ -0.49
PDGFRA-202ENST00000461294 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
PDGFRA-202ENST00000461294 SSH2Q76I76 1423 aa11.97□□□□□ -0.49
PDGFRA-202ENST00000461294 LARP1Q6PKG0 1096 aaKnown RBP11.97□□□□□ -0.49
PDGFRA-202ENST00000461294 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
PDGFRA-202ENST00000461294 L3MBTL2Q969R5 705 aa11.97□□□□□ -0.49
PDGFRA-202ENST00000461294 YBX3P16989 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDGFRA-202ENST00000461294 ZC3H6P61129 1189 aaKnown RBP11.95□□□□□ -0.5
PDGFRA-202ENST00000461294 TMEM132EQ6IEE7 984 aa11.95□□□□□ -0.5
PDGFRA-202ENST00000461294 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
PDGFRA-202ENST00000461294 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
PDGFRA-202ENST00000461294 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
PDGFRA-202ENST00000461294 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
PDGFRA-202ENST00000461294 ATP7BP35670 1465 aa11.93□□□□□ -0.5
PDGFRA-202ENST00000461294 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms