RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.08
IFT88-204ENST00000461115 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.08
IFT88-204ENST00000461115 NGEFQ8N5V2 710 aa14.52□□□□□ -0.08
IFT88-204ENST00000461115 ADAMTS8Q9UP79 889 aa14.52□□□□□ -0.08
IFT88-204ENST00000461115 TOPAZ1Q8N9V7 1692 aa14.52□□□□□ -0.08
IFT88-204ENST00000461115 PIK3R4Q99570 1358 aa14.52□□□□□ -0.09
IFT88-204ENST00000461115 WASLO00401 505 aaPredicted RBP14.51□□□□□ -0.09
IFT88-204ENST00000461115 NEFLP07196 543 aa14.51□□□□□ -0.09
IFT88-204ENST00000461115 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.09
IFT88-204ENST00000461115 WAPLQ7Z5K2 1190 aa14.51□□□□□ -0.09
IFT88-204ENST00000461115 TXNDC2Q86VQ3 553 aa14.51□□□□□ -0.09
IFT88-204ENST00000461115 EID1Q9Y6B2 187 aa14.51□□□□□ -0.09
IFT88-204ENST00000461115 PTPRUQ92729 1446 aa14.51□□□□□ -0.09
IFT88-204ENST00000461115 FKBP8Q14318 412 aa14.5□□□□□ -0.09
IFT88-204ENST00000461115 ROBO2Q9HCK4 1378 aa14.5□□□□□ -0.09
IFT88-204ENST00000461115 ZNF521Q96K83 1311 aa14.5□□□□□ -0.09
IFT88-204ENST00000461115 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
IFT88-204ENST00000461115 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
IFT88-204ENST00000461115 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
IFT88-204ENST00000461115 WDR43Q15061 677 aaKnown RBP eCLIP14.49□□□□□ -0.09
IFT88-204ENST00000461115 ITSN1Q15811 1721 aa14.48□□□□□ -0.09
IFT88-204ENST00000461115 FYB1O15117 783 aa14.47□□□□□ -0.09
IFT88-204ENST00000461115 HDGFL2Q7Z4V5 671 aaPredicted RBP14.47□□□□□ -0.09
IFT88-204ENST00000461115 EDC4Q6P2E9 1401 aaKnown RBP14.47□□□□□ -0.09
IFT88-204ENST00000461115 CHD2O14647 1828 aaKnown RBP14.46□□□□□ -0.09
IFT88-204ENST00000461115 COL3A1P02461 1466 aaPredicted RBP14.46□□□□□ -0.09
IFT88-204ENST00000461115 CABP1Q9NZU7 370 aa14.46□□□□□ -0.09
IFT88-204ENST00000461115 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
IFT88-204ENST00000461115 NRKQ7Z2Y5 1582 aa14.45□□□□□ -0.1
IFT88-204ENST00000461115 PPIP5K1Q6PFW1 1433 aa14.44□□□□□ -0.1
IFT88-204ENST00000461115 HAX1O00165 279 aa14.44□□□□□ -0.1
IFT88-204ENST00000461115 PRKAR2AP13861 404 aaKnown RBP14.44□□□□□ -0.1
IFT88-204ENST00000461115 CCDC61Q9Y6R9 512 aa14.44□□□□□ -0.1
IFT88-204ENST00000461115 NUDT16Q96DE0 195 aaKnown RBP14.43□□□□□ -0.1
IFT88-204ENST00000461115 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
IFT88-204ENST00000461115 PLEKHG3A1L390 1219 aa14.42□□□□□ -0.1
IFT88-204ENST00000461115 MTHFSP49914 203 aa14.42□□□□□ -0.1
IFT88-204ENST00000461115 MAP2P11137 1827 aaKnown RBP14.42□□□□□ -0.1
IFT88-204ENST00000461115 TRMT2AQ8IZ69 625 aaKnown RBP14.41□□□□□ -0.1
IFT88-204ENST00000461115 PRR36Q9H6K5 1346 aa14.41□□□□□ -0.1
IFT88-204ENST00000461115 AATKQ6ZMQ8 1374 aa14.41□□□□□ -0.1
IFT88-204ENST00000461115 CFAP53Q96M91 514 aa14.41□□□□□ -0.1
IFT88-204ENST00000461115 AMOTL2Q9Y2J4 779 aa14.41□□□□□ -0.1
IFT88-204ENST00000461115 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
IFT88-204ENST00000461115 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
IFT88-204ENST00000461115 BCANQ96GW7 911 aa14.39□□□□□ -0.11
IFT88-204ENST00000461115 ANKARQ7Z5J8 1434 aa14.39□□□□□ -0.11
IFT88-204ENST00000461115 NALCNQ8IZF0 1738 aa14.38□□□□□ -0.11
IFT88-204ENST00000461115 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
IFT88-204ENST00000461115 GGNBP2Q9H3C7 697 aa14.38□□□□□ -0.11
IFT88-204ENST00000461115 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
IFT88-204ENST00000461115 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
IFT88-204ENST00000461115 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
IFT88-204ENST00000461115 CDCA7LQ96GN5 454 aa14.37□□□□□ -0.11
IFT88-204ENST00000461115 NKTRP30414 1462 aaKnown RBP14.36□□□□□ -0.11
IFT88-204ENST00000461115 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
IFT88-204ENST00000461115 DUSP27Q5VZP5 1158 aa14.36□□□□□ -0.11
IFT88-204ENST00000461115 PPP4R2Q9NY27 417 aa14.36□□□□□ -0.11
IFT88-204ENST00000461115 RGPD8O14715 1765 aaPredicted RBP14.36□□□□□ -0.11
IFT88-204ENST00000461115 APAF1O14727 1248 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 RCAN3Q9UKA8 241 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 LRRC7Q96NW7 1537 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 CDK12Q9NYV4 1490 aaPredicted RBP14.35□□□□□ -0.11
IFT88-204ENST00000461115 USP6P35125 1406 aa14.35□□□□□ -0.11
IFT88-204ENST00000461115 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.11
IFT88-204ENST00000461115 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.12
IFT88-204ENST00000461115 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.12
IFT88-204ENST00000461115 TNNT2P45379 298 aaPredicted RBP14.32□□□□□ -0.12
IFT88-204ENST00000461115 RRP1P56182 461 aaKnown RBP14.32□□□□□ -0.12
IFT88-204ENST00000461115 PLEKHF1Q96S99 279 aa14.32□□□□□ -0.12
IFT88-204ENST00000461115 POLKQ9UBT6 870 aa14.32□□□□□ -0.12
IFT88-204ENST00000461115 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
IFT88-204ENST00000461115 USP31Q70CQ4 1352 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 TTC21BQ7Z4L5 1316 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 E9PSI1 815 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 KCNA6P17658 529 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 WDR63Q8IWG1 891 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 WWC1Q8IX03 1113 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 CCDC146Q8IYE0 955 aa14.31□□□□□ -0.12
IFT88-204ENST00000461115 SALL2Q9Y467 1007 aaPredicted RBP14.31□□□□□ -0.12
IFT88-204ENST00000461115 ACEP12821 1306 aa14.3□□□□□ -0.12
IFT88-204ENST00000461115 TTC21AQ8NDW8 1320 aa14.3□□□□□ -0.12
IFT88-204ENST00000461115 NCKAP5LQ9HCH0 1330 aa14.3□□□□□ -0.12
IFT88-204ENST00000461115 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
IFT88-204ENST00000461115 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
IFT88-204ENST00000461115 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
IFT88-204ENST00000461115 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
IFT88-204ENST00000461115 NME9Q86XW9 330 aa14.28□□□□□ -0.12
IFT88-204ENST00000461115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
IFT88-204ENST00000461115 MARF1Q9Y4F3 1742 aaKnown RBP14.28□□□□□ -0.12
IFT88-204ENST00000461115 ADGRL3Q9HAR2 1447 aa14.27□□□□□ -0.12
IFT88-204ENST00000461115 FCHSD2O94868 740 aa14.27□□□□□ -0.12
IFT88-204ENST00000461115 IRX6P78412 446 aaPredicted RBP14.27□□□□□ -0.12
IFT88-204ENST00000461115 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.12
IFT88-204ENST00000461115 COG3Q96JB2 828 aa14.27□□□□□ -0.12
IFT88-204ENST00000461115 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.12
IFT88-204ENST00000461115 U2AF1L5P0DN76 240 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms