RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 DDX19BQ9UMR2 479 aa15.38■□□□□ 0.05
AGRN-203ENST00000461111 NSD3Q9BZ95 1437 aa15.37■□□□□ 0.05
AGRN-203ENST00000461111 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
AGRN-203ENST00000461111 MINK1Q8N4C8 1332 aaPredicted RBP15.37■□□□□ 0.05
AGRN-203ENST00000461111 WDR7Q9Y4E6 1490 aa15.36■□□□□ 0.05
AGRN-203ENST00000461111 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
AGRN-203ENST00000461111 KIF2CQ99661 725 aa15.36■□□□□ 0.05
AGRN-203ENST00000461111 ZNF500O60304 480 aaPredicted RBP15.36■□□□□ 0.05
AGRN-203ENST00000461111 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
AGRN-203ENST00000461111 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
AGRN-203ENST00000461111 TERF1P54274 439 aa15.35■□□□□ 0.05
AGRN-203ENST00000461111 CCDC94Q9BW85 323 aaPredicted RBP15.35■□□□□ 0.05
AGRN-203ENST00000461111 KANK1Q14678 1352 aa15.35■□□□□ 0.05
AGRN-203ENST00000461111 GPRASP1Q5JY77 1395 aa15.35■□□□□ 0.05
AGRN-203ENST00000461111 MTERF4Q7Z6M4 381 aaKnown RBP15.35■□□□□ 0.05
AGRN-203ENST00000461111 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
AGRN-203ENST00000461111 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
AGRN-203ENST00000461111 PPP4R3BQ5MIZ7 849 aa15.34■□□□□ 0.05
AGRN-203ENST00000461111 ATF7IPQ6VMQ6 1270 aa15.34■□□□□ 0.05
AGRN-203ENST00000461111 LMBRD1Q9NUN5 540 aa15.34■□□□□ 0.05
AGRN-203ENST00000461111 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
AGRN-203ENST00000461111 SYCP2Q9BX26 1530 aa15.34■□□□□ 0.05
AGRN-203ENST00000461111 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
AGRN-203ENST00000461111 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
AGRN-203ENST00000461111 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.05
AGRN-203ENST00000461111 WDR63Q8IWG1 891 aa15.33■□□□□ 0.05
AGRN-203ENST00000461111 NGEFQ8N5V2 710 aa15.33■□□□□ 0.05
AGRN-203ENST00000461111 ZNF445P59923 1031 aa15.33■□□□□ 0.04
AGRN-203ENST00000461111 NSFL1CQ9UNZ2 370 aaKnown RBP15.33■□□□□ 0.04
AGRN-203ENST00000461111 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
AGRN-203ENST00000461111 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
AGRN-203ENST00000461111 NUCB1Q02818 461 aa15.32■□□□□ 0.04
AGRN-203ENST00000461111 DMTNQ08495 405 aa15.32■□□□□ 0.04
AGRN-203ENST00000461111 KIAA2012Q0VF49 1180 aa15.32■□□□□ 0.04
AGRN-203ENST00000461111 GPT2Q8TD30 523 aa15.32■□□□□ 0.04
AGRN-203ENST00000461111 ASXL1Q8IXJ9 1541 aa15.32■□□□□ 0.04
AGRN-203ENST00000461111 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
AGRN-203ENST00000461111 ZSCAN20P17040 1043 aaPredicted RBP15.31■□□□□ 0.04
AGRN-203ENST00000461111 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
AGRN-203ENST00000461111 NUCB2P80303 420 aa15.31■□□□□ 0.04
AGRN-203ENST00000461111 PDE4CQ08493 712 aa15.31■□□□□ 0.04
AGRN-203ENST00000461111 HS1BP3Q53T59 392 aa15.3■□□□□ 0.04
AGRN-203ENST00000461111 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
AGRN-203ENST00000461111 TMPOP42166 694 aaKnown RBP15.3■□□□□ 0.04
AGRN-203ENST00000461111 TTC12Q9H892 705 aaPredicted RBP15.3■□□□□ 0.04
AGRN-203ENST00000461111 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
AGRN-203ENST00000461111 SCAF11Q99590 1463 aaKnown RBP15.29■□□□□ 0.04
AGRN-203ENST00000461111 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 PDLIM2Q96JY6 352 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 GDPD2Q9HCC8 539 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
AGRN-203ENST00000461111 VGLL3A8MV65 326 aa15.27■□□□□ 0.04
AGRN-203ENST00000461111 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.04
AGRN-203ENST00000461111 NUTM2FA1L443 756 aa15.27■□□□□ 0.03
AGRN-203ENST00000461111 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
AGRN-203ENST00000461111 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
AGRN-203ENST00000461111 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
AGRN-203ENST00000461111 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
AGRN-203ENST00000461111 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
AGRN-203ENST00000461111 ZNF771Q7L3S4 317 aaPredicted RBP15.25■□□□□ 0.03
AGRN-203ENST00000461111 CGNQ9P2M7 1197 aaKnown RBP15.25■□□□□ 0.03
AGRN-203ENST00000461111 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 ZMYM3Q14202 1370 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
AGRN-203ENST00000461111 CDC45O75419 566 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 MYRIPQ8NFW9 859 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
AGRN-203ENST00000461111 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
AGRN-203ENST00000461111 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
AGRN-203ENST00000461111 SLC4A10Q6U841 1118 aa15.24■□□□□ 0.03
AGRN-203ENST00000461111 ZBTB22O15209 634 aa15.24■□□□□ 0.03
AGRN-203ENST00000461111 TSPY26PQ9H489 355 aa15.24■□□□□ 0.03
AGRN-203ENST00000461111 KIF3AQ9Y496 699 aa15.24■□□□□ 0.03
AGRN-203ENST00000461111 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
AGRN-203ENST00000461111 MCM5P33992 734 aa15.23■□□□□ 0.03
AGRN-203ENST00000461111 NOLC1Q14978 699 aaKnown RBP eCLIP15.23■□□□□ 0.034e-8■□□□□ 10.9
AGRN-203ENST00000461111 RABEP1Q15276 862 aa15.23■□□□□ 0.03
AGRN-203ENST00000461111 U2AF2P26368 475 aaKnown RBP eCLIP15.23■□□□□ 0.03
AGRN-203ENST00000461111 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
AGRN-203ENST00000461111 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
AGRN-203ENST00000461111 PRDM15P57071 1507 aaPredicted RBP15.23■□□□□ 0.03
AGRN-203ENST00000461111 PDCL2Q8N4E4 241 aa15.22■□□□□ 0.03
AGRN-203ENST00000461111 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
AGRN-203ENST00000461111 ABCC2Q92887 1545 aa15.22■□□□□ 0.03
AGRN-203ENST00000461111 SHANK2Q9UPX8 1470 aa15.22■□□□□ 0.03
AGRN-203ENST00000461111 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
AGRN-203ENST00000461111 DTNBO60941 627 aa15.22■□□□□ 0.03
AGRN-203ENST00000461111 ST18O60284 1047 aa15.21■□□□□ 0.03
AGRN-203ENST00000461111 UTP14CQ5TAP6 766 aaKnown RBP15.21■□□□□ 0.03
AGRN-203ENST00000461111 TSPYL6Q8N831 410 aa15.21■□□□□ 0.03
AGRN-203ENST00000461111 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.02
AGRN-203ENST00000461111 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
AGRN-203ENST00000461111 IBTKQ9P2D0 1353 aaPredicted RBP15.2■□□□□ 0.02
AGRN-203ENST00000461111 SPC24Q8NBT2 197 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms